miRNA 217 details

Id Micro217
SequenceTATTGGCCTGGTTCACTCAGA 
Annotated namesaly-miR170-5p; aly-miR171a-5p; ath-miR170-5p; ath-miR171a-5p; gma-miR171j-5p; stu-miR171a-5p; stu-miR171c-5p; 
Annotated pre-miRNANone

Targets of miRNA 217

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_1499; FTRINITY_DN54621_c0_g2_i3 830 850 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_1500; FTRINITY_DN54621_c0_g2_i4 1186 1206 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_1497; FTRINITY_DN54621_c0_g2_i2 830 850 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_1501; FTRINITY_DN54621_c0_g2_i5 1186 1206 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_201950; FTRINITY_DN56476_c1_g1_i1 182 202 CTTGAGTGAGTTGGGTCAGTA BLAST psRNATarget
Ll_transcript_246700; FTRINITY_DN53343_c1_g1_i1 49 69 GCTCAGTGAACCAGGTAAATA BLAST psRNATarget
Ll_transcript_201969; FTRINITY_DN56476_c1_g4_i6 589 609 CTTGAGTGAGTTGGGTCAATG BLAST psRNATarget
Ll_transcript_201960; FTRINITY_DN56476_c1_g4_i2 589 609 CTTGAGTGAGTTGGGTCAATG BLAST psRNATarget
Ll_transcript_110334; FTRINITY_DN55492_c4_g6_i7 449 469 GCCGAGTGAACCGGGCCGGTG BLAST psRNATarget
Ll_transcript_110327; FTRINITY_DN55492_c4_g6_i5 449 469 GCCGAGTGAACCGGGCCGGTG BLAST psRNATarget
Ll_transcript_42859; FTRINITY_DN54122_c4_g2_i2 635 655 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_42884; FTRINITY_DN54122_c4_g2_i21 635 655 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_42875; FTRINITY_DN54122_c4_g2_i14 741 761 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_42862; FTRINITY_DN54122_c4_g2_i4 741 761 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_241715; FTRINITY_DN53087_c6_g1_i3 1384 1404 ATTTAGTGAACCAGGTCATTA BLAST psRNATarget
Ll_transcript_42881; FTRINITY_DN54122_c4_g2_i18 635 655 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_42877; FTRINITY_DN54122_c4_g2_i15 635 655 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_42882; FTRINITY_DN54122_c4_g2_i19 741 761 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_42873; FTRINITY_DN54122_c4_g2_i12 741 761 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_241714; FTRINITY_DN53087_c6_g1_i2 1067 1087 ATTTAGTGAACCAGGTCATTA BLAST psRNATarget
Ll_transcript_241718; FTRINITY_DN53087_c6_g1_i6 1384 1404 ATTTAGTGAACCAGGTCATTA BLAST psRNATarget
Ll_transcript_241716; FTRINITY_DN53087_c6_g1_i4 1455 1475 ATTTAGTGAACCAGGTCATTA BLAST psRNATarget
Ll_transcript_241713; FTRINITY_DN53087_c6_g1_i1 1467 1487 ATTTAGTGAACCAGGTCATTA BLAST psRNATarget
Ll_transcript_41581; FTRINITY_DN59858_c0_g1_i1 43 63 AAAGAGCGAATCAGGCCAATG BLAST psRNATarget
Ll_transcript_23786; FTRINITY_DN53805_c3_g2_i1 529 549 AATCAGTGAATCAGTCCAATA BLAST psRNATarget
Ll_transcript_226932; FTRINITY_DN56172_c2_g1_i19 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226910; FTRINITY_DN56172_c2_g1_i4 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226900; FTRINITY_DN56172_c2_g1_i1 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226927; FTRINITY_DN56172_c2_g1_i16 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226925; FTRINITY_DN56172_c2_g1_i15 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226913; FTRINITY_DN56172_c2_g1_i7 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226929; FTRINITY_DN56172_c2_g1_i17 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226923; FTRINITY_DN56172_c2_g1_i13 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226918; FTRINITY_DN56172_c2_g1_i9 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226911; FTRINITY_DN56172_c2_g1_i5 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_226922; FTRINITY_DN56172_c2_g1_i12 611 632 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_161478; FTRINITY_DN47926_c1_g2_i1 235 255 TCTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_215646; FTRINITY_DN57799_c0_g1_i3 263 283 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_161477; FTRINITY_DN47926_c1_g1_i1 430 450 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_227738; FTRINITY_DN67674_c0_g1_i1 300 320 TTTGAGTTGAACAGGTCAATA BLAST psRNATarget
Ll_transcript_215644; FTRINITY_DN57799_c0_g1_i1 263 283 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_71371; FTRINITY_DN56053_c7_g2_i7 784 804 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_71369; FTRINITY_DN56053_c7_g2_i6 1376 1396 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_71360; FTRINITY_DN56053_c7_g2_i2 1376 1396 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_71363; FTRINITY_DN56053_c7_g2_i3 1491 1511 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_71365; FTRINITY_DN56053_c7_g2_i4 1376 1396 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_71367; FTRINITY_DN56053_c7_g2_i5 1491 1511 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_187627; FTRINITY_DN90924_c0_g1_i1 226 246 TATGAGTGAAGAAGGCTAATA BLAST psRNATarget
Ll_transcript_71374; FTRINITY_DN56053_c7_g2_i9 375 395 TGAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_129715; FTRINITY_DN53491_c1_g1_i1 183 203 TTTGATTTGACTAGGCTAATA BLAST psRNATarget
Ll_transcript_71373; FTRINITY_DN56053_c7_g2_i8 967 987 TGAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_89115; FTRINITY_DN53982_c1_g1_i15 62 82 TTTTATTGGACCAGGTCAGTA BLAST psRNATarget
Ll_transcript_89103; FTRINITY_DN53982_c1_g1_i3 62 82 TTTTATTGGACCAGGTCAGTA BLAST psRNATarget
Ll_transcript_71359; FTRINITY_DN56053_c7_g2_i1 967 987 TGAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_159114; FTRINITY_DN54702_c0_g1_i4 1350 1370 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_159112; FTRINITY_DN54702_c0_g1_i2 1350 1370 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_159113; FTRINITY_DN54702_c0_g1_i3 1394 1414 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_159117; FTRINITY_DN54702_c0_g1_i7 1394 1414 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_19849; FTRINITY_DN7177_c0_g1_i1 363 383 GATGGGTGAATCGTGTCAATA BLAST psRNATarget
Ll_transcript_45915; FTRINITY_DN43431_c0_g1_i1 720 740 CAAGGGAGAACCAGGTCAATG BLAST psRNATarget
Ll_transcript_183883; FTRINITY_DN57457_c0_g1_i4 1270 1290 CAGGAATGGATCAGGCTAATA BLAST psRNATarget
Ll_transcript_276459; TRINITY_DN45786_c0_g3_i6 777 797 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_276452; TRINITY_DN45786_c0_g3_i2 1133 1153 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_276457; TRINITY_DN45786_c0_g3_i4 777 797 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_276450; TRINITY_DN45786_c0_g3_i1 887 907 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_276453; TRINITY_DN45786_c0_g3_i3 1133 1153 AATGGGTGAACCGGGCCAGTG BLAST psRNATarget
Ll_transcript_353290; TRINITY_DN49445_c0_g2_i3 199 219 CTTGAGTGAGTTGGGTCAGTA BLAST psRNATarget
Ll_transcript_353297; TRINITY_DN49445_c0_g2_i5 589 609 CTTGAGTGAGTTGGGTCAATG BLAST psRNATarget
Ll_transcript_458167; TRINITY_DN49996_c3_g2_i6 359 379 GCCGAGTGAACCGGGCCGGTG BLAST psRNATarget
Ll_transcript_458147; TRINITY_DN49996_c3_g2_i2 359 379 GCCGAGTGAACCGGGCCGGTG BLAST psRNATarget
Ll_transcript_353286; TRINITY_DN49445_c0_g2_i1 1109 1129 CTTGAGTGAGTTGGGTCAATG BLAST psRNATarget
Ll_transcript_458145; TRINITY_DN49996_c3_g2_i1 359 379 GCCGAGTGAACCGGGCCGGTG BLAST psRNATarget
Ll_transcript_383363; TRINITY_DN47258_c3_g1_i11 318 338 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_383361; TRINITY_DN47258_c3_g1_i9 318 338 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_333865; TRINITY_DN42937_c0_g1_i1 660 680 ATTTAGTGAACCAGGTCATTA BLAST psRNATarget
Ll_transcript_383376; TRINITY_DN47258_c3_g1_i23 610 630 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_383359; TRINITY_DN47258_c3_g1_i8 716 736 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_383357; TRINITY_DN47258_c3_g1_i6 610 630 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_383364; TRINITY_DN47258_c3_g1_i12 716 736 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_383369; TRINITY_DN47258_c3_g1_i17 716 736 ATTGAATGAATCAGGTTGATA BLAST psRNATarget
Ll_transcript_333867; TRINITY_DN42937_c0_g1_i3 1268 1288 ATTTAGTGAACCAGGTCATTA BLAST psRNATarget
Ll_transcript_301186; TRINITY_DN72939_c0_g1_i1 93 113 AAAGAGCGAATCAGGCCAATG BLAST psRNATarget
Ll_transcript_318751; TRINITY_DN46288_c0_g1_i1 550 570 AATCAGTGAATCAGTCCAATA BLAST psRNATarget
Ll_transcript_319018; TRINITY_DN46261_c0_g1_i8 621 642 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_319011; TRINITY_DN46261_c0_g1_i1 621 642 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_319025; TRINITY_DN46261_c0_g1_i13 621 642 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_319021; TRINITY_DN46261_c0_g1_i10 621 642 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_319024; TRINITY_DN46261_c0_g1_i12 621 642 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_319014; TRINITY_DN46261_c0_g1_i4 621 642 TCTGAGATGAATCAGGCTAATG BLAST psRNATarget
Ll_transcript_495735; TRINITY_DN35461_c0_g1_i1 229 249 TCTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_352608; TRINITY_DN15480_c0_g2_i1 117 137 TTTGAGTTGAACAGGTCAATA BLAST psRNATarget
Ll_transcript_361774; TRINITY_DN48462_c3_g1_i1 259 279 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_375572; TRINITY_DN47799_c3_g2_i2 141 161 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_361779; TRINITY_DN48462_c6_g1_i2 379 399 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_375569; TRINITY_DN47799_c3_g2_i1 141 161 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_361778; TRINITY_DN48462_c6_g1_i1 379 399 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_375567; TRINITY_DN47799_c3_g1_i1 99 119 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_375573; TRINITY_DN47799_c3_g1_i4 99 119 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_375571; TRINITY_DN47799_c3_g1_i3 99 119 TTTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_343329; TRINITY_DN49870_c1_g3_i12 1251 1271 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_343327; TRINITY_DN49870_c1_g3_i11 1445 1465 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_343309; TRINITY_DN49870_c1_g3_i1 1560 1580 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_343317; TRINITY_DN49870_c1_g3_i5 1445 1465 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_343321; TRINITY_DN49870_c1_g3_i8 1657 1677 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_343312; TRINITY_DN49870_c1_g3_i3 1772 1792 GCAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_343320; TRINITY_DN49870_c1_g3_i7 444 464 TGAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_468073; TRINITY_DN49267_c5_g9_i2 204 224 TTTGATTTGACTAGGCTAATA BLAST psRNATarget
Ll_transcript_343325; TRINITY_DN49870_c1_g3_i10 1248 1268 TGAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_343322; TRINITY_DN49870_c1_g3_i9 1363 1383 TGAGAGTGAATTGGGTCAATG BLAST psRNATarget
Ll_transcript_528788; TRINITY_DN51017_c0_g3_i1 2165 2185 AATGAGTGGACCAAGCCGATC BLAST psRNATarget
Ll_transcript_528803; TRINITY_DN51017_c0_g3_i5 2233 2253 AATGAGTGGACCAAGCCGATC BLAST psRNATarget
Ll_transcript_528789; TRINITY_DN51017_c0_g3_i2 2260 2280 AATGAGTGGACCAAGCCGATC BLAST psRNATarget
Ll_transcript_415413; TRINITY_DN49694_c1_g2_i11 1398 1418 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_415410; TRINITY_DN49694_c1_g2_i8 1405 1425 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_415406; TRINITY_DN49694_c1_g2_i4 1398 1418 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_415411; TRINITY_DN49694_c1_g2_i9 1405 1425 TCGGCGTCAGCCAGGCCAATA BLAST psRNATarget
Ll_transcript_366293; TRINITY_DN46328_c2_g3_i3 982 1002 TTTTATTGGACCAGGTCAGTA BLAST psRNATarget
Ll_transcript_366285; TRINITY_DN46328_c2_g3_i1 982 1002 TTTTATTGGACCAGGTCAGTA BLAST psRNATarget
Ll_transcript_528790; TRINITY_DN51017_c0_g3_i3 2709 2729 AATGAGTGGACCAAGCCGATC BLAST psRNATarget
Ll_transcript_528801; TRINITY_DN51017_c0_g3_i4 2804 2824 AATGAGTGGACCAAGCCGATC BLAST psRNATarget
Ll_transcript_487266; TRINITY_DN52344_c0_g2_i1 556 576 GATGGGTGAATCGTGTCAATA BLAST psRNATarget
Ll_transcript_340796; TRINITY_DN79260_c0_g1_i1 153 173 ACTGGCAGAATCAGGCTAATA BLAST psRNATarget
Ll_transcript_361775; TRINITY_DN48462_c3_g2_i1 1 20 TTGATTGAGCCGTGCCAATA BLAST psRNATarget
Ll_transcript_298381; TRINITY_DN51593_c0_g1_i1 816 836 CAGGAATGGATCAGGCTAATA BLAST psRNATarget
Ll_transcript_298401; TRINITY_DN51593_c0_g1_i14 816 836 CAGGAATGGATCAGGCTAATA BLAST psRNATarget
Ll_transcript_298385; TRINITY_DN51593_c0_g1_i5 920 940 CAGGAATGGATCAGGCTAATA BLAST psRNATarget
Ll_transcript_298403; TRINITY_DN51593_c0_g1_i15 920 940 CAGGAATGGATCAGGCTAATA BLAST psRNATarget

Expression of miRNA 217


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)