Protein coding transcript 249732

TranscriptLl_transcript_32685
CDS coordinates702-6308 (+)
Peptide sequenceMEKIRILCLHSLAALCQDRSHQTSVLTGVTSGGHRGILSSLMQKAIDCVVSGDNSRWSVHFAEALLSLVTVLVSSSSSSGRSAMCEAGFIPTLLPLLKDTNPQHLHLVEKAVHILEAFMEYSNQAVALFRDWGGLDDTISRLYIEVSHVESGGKHPDENSESCARNVHMKEGSSTGLNGMQPLYSEPLIAYHRRLLMKALLRAISLGTYARESIAHIYGYEENVLPYCLCIIFRRAKDFGGGVFSLAATVMRDLIQKDPTCFPVLDTAGLPSAFLDAIMDDVLNSAEAITCIPQCLDALCLNSNGLQAVKDKNSLRCFVKVFTSRTYLRTLTGDTPASLSSGLDELMRHASSLRGPGVDMLVEILETISKIGSRTDSPSLPCSSISVPMEMDGEDNNLMLPDNRESSKADSAEQIIEPSDASVMNIESFLPDCANNVARLLETILHNADTCRIFVEKKGIEAVLQLFTLPLMPPIVSLGQNIFVAFKNFSPQHNVSLVRTLCSFLREHLKSTNEFLDLVGGTQIALVESAKQTKVLKYLSSLEGLLSLSASLLKGAAITVVSELSTSDASVLKDIGRSYKEIIWKISLCNDSMAEENNTDQEPEMSQVPSPDTVERESDDDGNVQTMRYTNSVFAGSGSHSMWSGERDFVSVVRSGESLHRRNRHGLSRLRGGRTGRHVEALNIDSEAASSLVEAPSSQNLKKKSPDVLASEILNKLASTLRSFFTALVKGFTSPNRRRADPGPLSSASKILGTALATNFLEALSFSGHFTYAELEMSLSVKCRYLGKVVDDMAALTFDSRRRSCYTVMVNNFYVHGTFKELLTTFEATSQLLWTLPCSFPSSDIDIGKKGDGSKLSHNIWLLDTLQSYCRLLTYFVNSSILLSATSASQAELLAQPVAVGLSIGLFPVPRDPDAFVKMLQSQVLDVILPVWNHPMFSNCSPGFISSIISLVTHVYSGVGDVKRNHSNIVGITNQRFMPPPPDETTIGTIVEMGFSRARAEEALRRVETNSVEMAMEWLFSHADDPVQEDDELARALALSLGNSSETSKVDGAEKTIGVLTEEGHVKKPPIDDILAASVKLFQGSDSVAFQLTDLLVTLCSQNKGEDRPKIISYLLQQLKLCPLDFSKDNCALSVLAHIIALLLFEDGTTREIAAENGIISTAIDILTDFKGKHESGKELLAPKCISVLLLILDQMLQSRPKTENTDGTQTGSVPESSGDHGSLQFAGVIVQKEKKLDVNVKEPGAALDNILGSSTGFASIDESLKLLNIVCDLIKQHVPAVVMQAVLQLCARLTKTHALALQFLENGGLTALFSLPKNCFFPGYDTVVSAIVRHLLEDPQTLQTAMELEIRQTLSGNRHSGRVSPRSFLTSLAPVISRDPVVFMKAATTVCQLETSGGRTIVVLSKEKEKEKSKASSTEAGLSSNECVRIPESKSHDGSAKCLKSHKKVPVNLTQVIDQLLEIVLKYPPMNGQEDSECGSTFMDIDEPAMKVKGKSKVEEVGVLETESERSTGLVKVTFVLKLLSDILLMYGHAVGVILRRDSEMGQFRGSNQPSGHSGIIHHVLHRLLPLSVDKSAGPDDWRSKLSDKASWFLVVLCGRSSEGRKRVTNELVKVLMSFSNLESNSTKNSLLPDKRLFTFIDLVYSILSKNSSAGSLPGSGYSPDIAKSMIDGGIIQCLTSILQVVDLDHPDAPKIVNLILKGLEGLTRAANASEHIIKSDGIEKRRSAGSNDRPDDQIRTSSAAETVRDDQNASSQEAHGYTMDNAHDQGTSQGNHHTDNPNQTVQGMRVEGETQNPSMELGVDFMPEEIGEGAVLHNPDQIEMTFHVENRADDDMGDEDDDMGDDGDDDEDDEDGEDEEEDIAEDG
ORF Type3prime_partial

Annotations of Ll_transcript_32685

BlastpE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 60.34% of identity
BlastxE3 ubiquitin-protein ligase UPL1 from Arabidopsis with 60.19% of identity
Eggnogubiquitin protein ligase(COG5021)
KeggLink to kegg annotations (AT1G55860)
CantataDBLink to cantataDB annotations (CNT0000539)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019448026.1)
PfamDomain of Unknown Function (DUF913) (PF06025.11)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;


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Alignmet by MSA Viewer