Protein coding transcript 260772

TranscriptLl_transcript_256744
CDS coordinates66-3956 (+)
Peptide sequenceMEEMTMAIDNCSQQKQLSHHALPFARSYQVEALEKAMKENTIVFLETGAGKTLIAIMLLRSYAYLLRKPSPYIAVFLVPKVVLVSQQAEAVKVLTDLKVGMYWGEMGVDYWDASTWNKEFEKHEVLVMTPAILLRSLRHSFLKLNMIKVLIMDECHHARGRDPYACIMREFYHDQLKSGVSDLPRIFGMTASPIKTNVGNSEWTLAESIHKLMTLMHSKVYTCASEAITEFIPISTPKFKFYTEHVIPYVIFQELAGKLKMLKLQYELAVGNSDFTQSAAESAHKRIEKIFDSLMFCLDELGVWLALKAAESLSTDEYESFSCGNSGDGLVKSFSLATVHHLTTYLPSGPQWSIGDNIKSDEDMGLLTSKVCCLVDSLVEYRDLNNMRCIVFVERIITAVVLETLLNALLPKYNSWKTKFIAGHNSWLKNQTRKTQNEIVEEFRDGLVNIIVATSILEEGLDVQSCNLVIRFDPCPTVCSFIQSRGRARMQNSDYVLMVKSGDSVTHSRLEKYLASGDIMRKESLRQSSIPCGSLEQLPEEVYRVESTGAIVNLSSSITLIYLYCSWLPSDGYFKPSPRWDKETGTLYLPKSCPLQQPIQVQGDKKFSKNIACLEACKQLHKIGALTDNLVPDIVVEEAEVDAFENEPYTEEQPSYVPYQLVNSLSKNEKKIYHCYLIELKQNFSYDISVRDIVFATRNELDPVIGSTQFEMCFDRGTLSVNLRCFGTVHLSPNEVLLCKKFQVTILKILVDRNMDKLVASLESLNKLYLDDYLEIDYLLLPATAIQHRPAIIDWLSITSTDPSKITCEKHTPKVWTKNGLVCPCMLQDSLVYTPHNGHIYMTTNIMELDGNSTLELKDGGVTTYKKYYEEKHGTRLHFEYQQLLHARRIFVVKNYSHGRRQEKDREAGNKFVELPPELCCIIMSPISISTIYSFSFAPSIMHHLESLFGAYNLKSTYLKQCIQDEIQIAKVLEAITTKRCKDPFNYESLETLGDSFLKYAASKELFKSYQNLHEGLLSVKRTKIISNAALCKFGCNSGLPGFIRNAPFDPHTWLIPGDKSESYKLKKELDSKGTTIYVSGKRKLKRKIIADVVEALIGAFLTSGGEKAALLFMDWVGIKVNFDIMPYERHLSIQPEKLLNVSFLESLLNYKFRDPSLLVEALTHGSYMLPEIPSCYQRLEFLGDSILDYLITMHLYEKYPGLSPGQLTDMRSASVNNDCYAWSAIKAGLHKHILHASQELHKHIFNTLNTIQKLASFTTFGWESEASFPKVLGDIIESLAGAILVDSGYDKDVVWQ
ORF Type3prime_partial

Annotations of Ll_transcript_256744

BlastpEndoribonuclease Dicer homolog 2 from Arabidopsis with 55.78% of identity
BlastxEndoribonuclease Dicer homolog 2 from Arabidopsis with 55.78% of identity
EggnogDigests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Also processes some mRNAs, and tRNAs when they are encoded in the rRNA operon (By similarity)(COG0571)
KeggLink to kegg annotations (AT3G03300)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019426302.1)
PfamType III restriction enzyme, res subunit (PF04851.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


Loading content...

Grab and slide to change sequence position

Alignmet by MSA Viewer