Protein coding transcript 72577

TranscriptLl_transcript_353316
CDS coordinates198-3380 (+)
Peptide sequenceMIKLQRSFTTCSTSTFSTSSSLSLRHFFMLQFRMLQSSPNSCLQYTALGVGIGNSIQCQRCFPNVKIGVKPKNYSSIQPSFRSFSGTRVSGRGSRCIAASLGDFGFRYLGNGVGRSLISDGGFPKRFSSIVKKGTDNKKKGVKALAVHGKDKDASDGASDSKDVVVNGVTSRKSSDENKKKPKKVSPVSTAPSDAASDKKDTKVAAKKKKPSKSKKNSTVAGAEVSTKSSKGKKTSNSSEPKADSAVEEVPDNNAPTKNQTKKKSGNTAQAEQVKSSLGKFTDKPLYPPTGKSVLVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAARSGSVRPDDDFSMVWEVPSPAWTHLKSIKVALSGAENLILASDPDREGEAIAWHIVEMLQQQGALHDNISVARVVFHEITEKAIKGALQAPREIDVSLVHAYLARRALDYLIGFNISPLLWRKLPGCQSAGRVQSAALSLICDREMEIDEFKPKEYWTAEAHLKRKEPGSNEDLNFPAHLTHLDSKTLNQFSITSNTEATDVENKINSAELQVIRLKRNKIRRNPPTPYITSTLQQDAANKLHFAASHTMKLAQKLYEGVELSDGKAVGLITYTRTDGLHISDEAVTNIRSLITERYGQEFAAQSAPKYIKKVKNAQEAHEAIRPTDIQKLPSMLVGVLDEESLKLYTLIWSRTVSCQMEPAIFEQIQVDIGNAGESIILRSTSSRVDFAGYRAVFTDTETEAVQDKGNDGSNRDQYFGVLSSLKQGDPLLLVRAELNQHHTQPPPRYSEASLVKKLEELGIGRPSTYASTLKVLKDRNYVIVKSRVLTPEFRGRMVSAFLSHHFSEVTDYSFTADMETELDNVSAGLTEWKGLLRDYWTRFKSYCDRTSNVHIHQVEKMLEKKFGDYLFASLPDQSRVCPSCMEGTLIFKVSRFGSGYFIGCDQHPRCKYIAKTLYGVDEDEDTPQPNTTIEEPKILGVSSGSNEKVLLKKGPYGFYIQLGEDRKGYIPKRSSVSHIKDVDSITLEDALDLLKYPLTLGNHPDDGQPVILKLARVGFSVRYRRTIASVPKV*
ORF Typecomplete

Annotations of Ll_transcript_353316

BlastpDNA topoisomerase 1 from spotted fever group with 43.21% of identity
BlastxDNA topoisomerase 1 from spotted fever group with 43.21% of identity
EggnogReleases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity)(COG0550)
KeggLink to kegg annotations (RF_0530)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019438806.1)
PfamToprim domain (PF01751.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;


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