| Id Trinity | FTRINITY_DN51830_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_187280 |
| Sequence | TTCAATTTCAAAGTTGATAGGTAAAAGCTGCTGCGACACAGTTTCAATTCAATAACAGAGAGTTCCAATGGAAATAGAACAAGAGAATGGGAATATCCAT CATGATTATAATCATCACCAAGAGAATGAGAATGAGAGAGTTAATGGATGTTTAAGCAGTTTCATTGATGATGGAAGCATAGAGAGTCACAGATATTACT TGTCTAGAAGAACTGCATTGGAGATGTTGAAAGACAGAGGCTATTCTGTTCCATCTTCTGAGATCGAAATCTCTCTCTCTGAATTCAGAGCCATTCATGG TCACAACCCTGACGTTGAACGACTCCGCTTTTCAGCCACTCATCAATCTAACCCTTCCAAGAGGATTTTAGTCATTTTCTGTGGGCCAGGTGTTGTCAAA GTTAATGTGATCAGGAACATTGCTGGACAGATTGTTAACAGAGAGACTTTAACTGGACTCATACTGGTAGTGCAGAATCAAATTACTGCCCAGGCCTTGA AAGCAGTGAAGATTTTCTCATTCAAGGTTGAAATATTCCAGATCACAGACTTGCTTGTTAATATCACGAAGCATGTATTGAAGCCAAAGCATGAGGTGCT GACTGAACAGCAGAAACAAAGTCTCCTGAAGAAGTACAGTTTAGAAGAAAAGCAGCTTCCCCGCATGCTACAGACAGACGCGATCACGAAATACTATGGA CTGGAGAGGGGGCAAGTTGTTAAAGTTACCTACAATGGTGAAGTCACTCAATTGCATGTCACATATCGATGTGTTTGGTGATGCTTTTGTGTGCTTTTTC TTGTATTATGCGAGTTGAATTCGTAGATCACAATTATTTATCACACTTGAGAAGTTTATGAACAATTTTTAAGCCCCGGGTACCGGTCCTAATGTTCAGA ACTCTATATATTTAGGGTTGTGGATGGCTTTCTCTTGGACCCATGGAGAATAAGTCCACACTGCATAGTTCTATTTGCAGACCTTTTTAACAAACTACAC TACTTGCAAATGTGGCTACCTCTATGTTGAAAATGACTCTTTTATTTTTCAAACAATATTTGGTGTAGCCATTCTAGAAGTTTATGCTATAAACTCGATA TGGGCCAATTCCATTGGAGATCTATGGTGAAAAGAATGGGCATTAAAGCTACACAGTGTGACGAGTAACTTTGTTTTAGTGACAACTAAGGGTGTAAAAT TTTAGTTTGGTTTGGTTTTTGGTACAATTTATTGACTGAACATCAAGATATAATTCGATTCATTTTAATTAATCACACATTTTATTTAGGAACCAAACCG AACTAATATGTAACTTTCCTGGGAAGGGTATTCATGTGTATAATGTCATTTTATTGTAATTTCCCCTTTTTAGAAACTGTAGTAGTTGACAGTTAGTTAG TAGCTATAAATAGGTTTGCAACTGTTTTTGGGAAGTTAGTTCATTTTTCAGAAACACAATTCTCTCTTGTAATCTTCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_22997; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_187280
| Blastp | DNA-directed RNA polymerase V subunit 5A from Arabidopsis with 60.48% of identity |
|---|---|
| Blastx | DNA-directed RNA polymerase V subunit 5A from Arabidopsis with 59.9% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates(COG2012) |
| Kegg | Link to kegg annotations (AT3G57080) |
| CantataDB | Link to cantataDB annotations (CNT0001929) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437055.1) |
| Pfam | RNA polymerase Rpb5, N-terminal domain (PF03871.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |