Ll_transcript_173888

Id TrinityFTRINITY_DN52134_c0_g1_i7
Name TranscriptLl_transcript_173888
SequenceGTATAATCATCGTGCATGCAATTTGTGCCTCTTTCTCTCTCTCTCTCTCTATTTTTTCTCCTTTCTTATATTTCTGCATGCACACGCCTTCTCTCTCTTT CTCTCTCCGTCTTCGTTTTCTCTCTCTCCGGTCACCGTCAATTCAAATTCAACCGTTTTCTCTGTCTCCGGTCAGATTCCGACCACTTTCCGATCAACAC TCCCTCCACCTCCGCAAATGCAAATCCAAAACCACACCACCCGCCGCCACAGCTTCTCTCTCTAAAAAAATCACTGAACAACGAAACTGCTTCTGATTAA CTTCAATTAACCGCTACCACCAACTCCACCTTCGTTCTTCGGTTTAATTTCGTGAAGTGGAATTGAGGTTGAAAATGGAGTCAAGGAGTTGTATGAACGT GGCGTGTGCCGCCACAACGTCGATCCGGTGGCGCAAAGGTTGGGCCTTGCGGTCCGGCGAATTAGCCGAGCTATGTGATAAGTGCGGTTCTGCTTATGAA CAATCAACATTTTGTGATTTGTTTCACTCAAACGATGATGGTTGGAGAGAGTGCACTCCATGTGGAAAGCGACTCCATTGTGGATGTGCTGCCTCTTTGT CTCAGCTTGAGTTACTAGATCTGGGTGGTGTAAGCTGTATAAATTGCGCGAAGAATTTCGGAATTCAACCTGTGGCAACTACTGAAAAGACTAATGGATC TGGGACATCAAAGGTAAAAAATGTCAGTGAACAACATTGCATATCTCTGGCTAACCAATTAAATGCGAGGGGTATGCAATTAGGGCATTATGCAGAGAGC GATGGGCTGAGGTGCTGGCTCAAAGCACATAATAATGTTGACACAAGTGGGACTTCTGCAGAAATGAAACTGGAAGAAGTTTCACCTTCGGTTGAAGATA TTGGGAACACTTTGATATCACAATTTCGTCGTGAGTTTAATGGATCATCTAAGGCTGCCAAAGCAGACAACAATAAGTCAGACATGGAAAGGCGAGATAT ATATGAATCATTGGCACAGACAAATTTGAGTATGACCCTTGCTACTCCATTAGGAAACTCAAATCCCTTTCAGAGAGCTATTGTTGTTGAAAGGGAACAA AGTAAAACAGCGCCTCCACTTCTGTCAGGGTCTAGGTCTCGCCATCTATTACCTAAGCCCCCTAGGTCAACTCTTGCTGTGGGCTTAGAAGCAAATACAG GCATGCAATCCCAGATTCGTGTAGCAAGGCCTCCTGCTGAAGGACGGGGAAGGAATCAGTTACTTCCGCGTTATTGGCCTAGGATTACAGATCAAGAGTT GCAGCAAATATCTGGAGGTTCAAATTCCACCATCGTGCCACTCTTTGAGAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTTTACCA AAAGCATGTGCTGAAGCCTATTTTCCTCACATCTCTCAAGCGGAGGGCCTTCCTTTGCGAATCCAAGATGTGAAGGGAAAAGAATGGGTGTTCCAGTTTA GATTTTGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAACTCCGTGCATCCAGTCAATGCAATTGCAAGCTGGGGATACTGTAACATTCAG CCGTATGGACCCTGAGGGGAAACTTGTGATGGGGTTTAGGAAGGCAATTAATTCTTCAGCAGTACAGGACGCTCATCCATCTACTGTGCCCAATGGTTCT CATTCAATTGAAACTTCCTACTCTGGTGTTTATGAGAATTTACCTATATTAAGTGGTTCTGGCCTTCTTCAGTCACAAAAGGGAAGTTCAGAGACCCATC TACATATGCTGTCTAAAGAATGGAATTCAGCTGGTGGTGACATGAACTTGCACAATATTGAGATGCCTGAAAGCAGGAAAAGAGAGGGGATGCTTTTCCC AGCTATGATGGTTCCTGAGAAGAAGAGAGCTCGAAATATTGGGTCAAAAAGTAAGAGATTGCTTATTGAAAGCCAGGATGCACTGGAGCTGAAACTTACA TGGGAAGAGGCTCAGGATTTGCTACGTCCATCTCCAACAACTAAGCCAAGCATTGTAATGATTGAAGATCATATATTTGAAGAGTATGAAGAACCTCCTG TCTTTGGTAAGAGGAGTATATGTGTAGCTCACTCAACTGGGATAAATGAGCAGTGGACACAATGTGATATGTGCTCAAAATGGCGGAAGTTGCCAATTGA TGTGCTTGTTCCTCCTAAGTGGACATGCACAGAAAATTTATGGGATCAGAATAGGTCTTCATGTTCTGCTCCCAACGAATTGAATCCAAGGGAACTAGAT AATCTGCTGAGACTGAACAAGGAATTCAAGAAACAAAAAGTGGCAGCAAGCTCCAGACAACTGGCACTTGAATCTTCTGGACTGGATGCTTTGGCGAATG CTGCAACCCTTGGAGATGATGCAGGTGACCCTGGCAGCACACCGGTCGCTACCACCACAAAACACCCTCGGCATAGACCTGGGTGCTCCTGCATTGTGTG TATCCAACCACCAAGTGGGAAGGGTAAACACAAACCTACATGCACCTGCAATGTGTGCATGACAGTTAAGCGACGGTTTAAAACCCTAATGATGCGGAAG AAGAAGCGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATTCGAAATCATTGGGGACCAAGGATGAAGCAGAAGTAGACAGCACCTCTCTTTTAA CTCCAGTTGATGGTTCGGAGAATGGAGCAAGGGTGCCAAATGAGTTGGACTCAAGCAGTCAAAACCTCATGGCTGAAGCTGCGAAGGGACAATTAGACTT GAATTGCCAACCTGACCGAGAAGACATGCAAGCCGGGCTAAATAATAATGTGAGCATGATGAGTCTTCTTCAAGAAGCAAATCTCCCTCTGGAGACCTAT ATGAAGAAAAATGGCATTACTAGCTTGACATTGGAGCAGCAAACAAATTCAGCTTCAAATGTGCCGGCACCGACAACCAATGAGAGTGAGGGAAGACATA ATGAGGATTGCTTTACTGCTTCTGCTGCTAATGAGCAGGAAAGCAGCCCTGAATTGAATAGTGAGCAGGATAAAGGTCAGAACAATTCACAGTCATGAAG TCCAGTCACCACCTTCATTTTCTTTATCCTTTTTTTTACTCGAAAATCATTTTACAAGAAACCTTCTTGCATGAATTATAGGAGGTTCATTGGGATGTCT TTTGCTTTTTGTGTCTTATGATTGTTAATTAAACAAACCCATACAAACTCAATAACCTACATATACTAAAGTTTGCCTTATAGACTTTGTAAACATCTCC TTGCCAAGTCATAATACACCTGGGTTTGTTTCTCTAGAATGTGTTGAAGTATGAATAGATATTCTGTCTTTGCTTCTTATTTGGTTAAAGGGGGAGGGCA CTAATCTGATTCTTTAGCACGTGGTATAAATTTGAGTAGCCATTGGTGGTTCTTCCTCCTCTGACATCAGGAAAAGACTTTGTAATTGCC BLAST
Tissueflowers
Gene nameLI_gene_23968; 
Additional informationdetails; 

Expression of Ll_transcript_173888

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_173888

BlastpB3 domain-containing protein Os07g0679700 from Oryza sativa with 49.09% of identity
BlastxB3 domain-containing transcription repressor VAL2 from Arabidopsis with 49.19% of identity
EggnogB3 domain-containing protein(ENOG410Z235)
KeggLink to kegg annotations (4344293)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019464098.1)
PfamB3 DNA binding domain (PF02362.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;