Ll_transcript_86943

Id TrinityFTRINITY_DN52449_c0_g1_i3
Name TranscriptLl_transcript_86943
SequenceCACCAAAGCTGACTCGGGTCCTTTGTCTCTCTCCCTCTGCACCTCGAGCCCAAAAATTGTACTCCATTTTCATTTACTCTCACTACAAAACTACCACTAA GAACCTTCTAGAACAAAAATGCACATTTTCCTAACAAACTTCTCTTAACACTACATGCATCATTTCACTGCTTGATACATTTTCAGGTTTCTCAAACATT CAAATCTCTTCAATTTCTCTCTAATTTTTATTTCAAGATGGTGAAAAAGAACAAAAGAAAGAAGGAGGAGATTGCTGAGGATTGGTGCTTTTTATGCAAA GATGGAGGATCAATGAGGGTTTGTGATTTCAAGGATTGCCTTAAAGTTTATCATCCAGTTTGCGCCGGAGAAGAAGATTCGTTTTTGGAGGCTGACACTT ATTGGTGTTGCGCTTCACATTATTGCTTCCGTTGCCGTAGAAGCTCAAAGTTTAAGTGCATTTGCTGCCCAATAGCGGTTTGTGGGCGCTGCTTAGGTTA TGGTGAATTTGCTATTGTCAAAAGGGACAAAGGATTTTGCAGCCACTGCTCAAAACTTGCACTACTAATTGAAGAAAATGTTGATGTTGATTCTGATGGG GGAAAGGTAGATTTCAAAGATTCAAATACATATGAATCCTATTTTTTAGAATATTACGAAGCTATGAAAATAAAAGAAGGGCTGAACTCTTCACATGTGC ATTCCGCGCATAACTTCTTGAAGAATGGTAAAAACCAGAGTAACTTGGATCTAGCTGGAATAGGTGAAGGGGAAGATGATGGTGGAGATTCTGAAGACGG GAGTGACTATATAGTTTCTGATTATGATGACATGAATGATACAGCAGGAGTTAAACCAATGAAGAAAAAGCAGAGATGCAAAAAGCAACTAAAATCAACA AAAGGAAATATGAAAGATAAGAAAAAGGAGTTTATTGGATGGGGTTCAAGAAGTCTCATAGAATTTCTTAATTATATTGGTAGAGATACGAGTAAAGAAT GTTCTGAACATGATGTTGCTTCGGTCATTATTGAGTACTGCAAAGTAAACAACCTCTTTGACTCCAAGAAAAAGAGGAAGGTGCTTTGTGATGTAAAACT GAGTTCTTTACTCGGGAGGAAATCAGTGAATAGAAACAACATACAAAACCTTTTGGCACATCATTTTGCTGAGAATGTGGAGGAATTTGATGATATCACT AGTAGTTCAGAAAATAGGGATGATAATGGGCCATTCAAATGTTCGAGCAAGGGGAAATTGTCAAGTACAAAATCTATTCAGAACCTAGTTCCTGAAGAGC GTAAAAGCAGTTTTGCAGCCATAGTTAGTTCAAATATCAAGCTTGTATACTTAAAGAGGAGTTTAGTGGAGGGGCTTTTGAAACAGCCAGAAACTTTTAG TGACAAAGTAATGGGAAGTTTTGTAAGAGTCAAGTCTGACCCGAATGATTATTTACAGAAGAATTCCTATCTGCTTGTGCAGGTTGTAGGAATAAACAGG TCGTCAAAGAATAACGAAATCAACGGGGAAGTTCTGCTTCAGCTTTGCTACATGCCAAAAGATGTACCTATCTGCAAAATTTCAGATGATGACTTTACTG AGGAAGAATGTCAAGATCTCTATCAGAGAATGAAAAATGGACTGCTCAAGCAGCCTACCGTACTGGAGCTTGAACAGAAAGCGAGAAGTCTGCATGAAGA TATAATAAAGCATTGGATCCCGAGGGAGCTGACACTGTTACAAAATCGCATTGATATGGCCAATGAAAAGGGGTGGAGGAGAGAACTTGCTGAGTACATA GAGCGAAAACTGAAGCTTCAGACTGCATCAGAACAGTCACGTTTATTAAGTGATATTCCAAAAGTAATTCCTGAAATAGTTGATAGCAAACTATCACCGA AGAATTCCCCGAGAAATGATAGGCTTGAGGGAAATGGGTTGCCAGAATTAGCCATGGGAAAGACTTCCAACTCTGTCGGACGTTATCCCAAGCATAATGC TTTTGCTCGTTGGCCTCATAATACAACAGATGTTGCAGACTCTCCTGTCTCTGCTGAAAAATTGTTTGAGCATCCAGTTTCCCAAGATAAAGGCACTCTT CAATCTACAACAAATGAAATGCAACATGATCCCAAGGCTACACTGCCTGAACAAACAAGATTGAACTCTCAGACCTCAAATAATGGTTTGCATTGTCCTA GGAACACAAGATCTAGATCTGGTATAGATGGCAGAAAACCGAATGCCATGAATACTAAAAAGAAAATAGAGGAAAAACAAAGCATTTCCATTGCTGACCC TATTGAGGCAAGTGCCAATGACAAACAACAGGATGCAAGTATCTCAGATATTCCAATGGGCAAAAAGATAGTTAACATTTCAACCATAGACGTTATCAAG TTAAGTGATACAGATGAAGAAGATGAAAGTATTGCAGACATTTCAGCAGGAAGGAAGGTAGTGGAGGATCCTGAGAGTCCTGTTTGGAACTGTTTAAGTC CTTTTGGTGAAAGAAGTGGACCCTATTCATTGTCTGTACTACGACGTTGGATTGCAACTGCTTCATATCACTTAGAATTCAAGGTTTGGAAGACAGGACA GAGTGAAGCACAAGCAGTACTTCTCACTGATGCTCTTAGCCAAAGTTTCCCTACTATGTAGGTAAATATGTAAATGAAAGGAAAGCATTGCCTTAAGTAC ATAATCCGTGTTAATATATGGTTTTTGAATACTTGAGATTGAACCTGGTAGGTGTTTGTGTGGAAGTTGCAAGTACTTTATTTTCATGTGGTTTCCTAAT ACTGATGGTCTTCAAGAAGGAAAAAGATTAATAATAGAGGTTCTATTTTGTGTGCATTTCCAAA BLAST
Tissueflowers
Gene nameLI_gene_25622; 
Additional informationdetails; 

Expression of Ll_transcript_86943

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_86943

BlastpUncharacterized protein At5g08430 from Arabidopsis with 35.74% of identity
BlastxUncharacterized protein At5g08430 from Arabidopsis with 47.37% of identity
EggnogSWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member(COG5531)
KeggLink to kegg annotations (AT5G08430)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419914.1)
PfamSWIB/MDM2 domain (PF02201.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;