| Id Trinity | FTRINITY_DN53195_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_223237 |
| Sequence | ATAGAATTCCACAAATGAAATCTAGGTCCAAACTCCAAACTCGAAACTCAAAATCCACCGAAAACAAAGAGCGGGAGAAGAACAAAACTCTCAACTCTTT CACACTTTCATTTCACTCTTCACTTCACCTAATCTCACTTCCATTCCAAAACGACAATGTCCATCGGCGTTCGTCGCTTAACGGTTCTCGGCGAGTTCAA ACCCTTTGGTCTCATCGCCGAAGCTCTCGACGGTAAAACCCTTGACTCTGTAACCGCCAACTACGATTACTTCCTTTTCGATCCACAAGCCGCTCGAGAC CGAGTCGCCGAAGATGATTGCGATGAGGTTGCTTCTGCATTGAGCAACCGCGGTGATCATGAGTTATTCATCCGAGGGAATCGGATTATATGGTCGACTG GTGCAAGAGTCTTTAGGAGATTTACCTTGAGTTCCTCTATTGTTAAGGTGTGCTGGTGTCGTTTGGGTCATTCAGCAGAAGCTCTTCTATGTATATTACA AACTGATTGTTTGACAATCTATAATACCTCTGGGGAAGTAGTATCACTTCCACTTCATTCTGCAATCACATCAATATGGCCTCTTCCATTTGGTTTGTTA CTCCAGCAGGAAGTGGAAGCAAATATATCATCACATGTTCCTTTTTCATCCACAAGCCCTTTGCTTAGTACACGCGATATGCTGCTTAGTGCCTCTCATC ATATCCAAAAGGGAGAGGGAACTTCGAAGTCCTCACATCTGATTCTGATGGATCCACTGGATGAGCAACAGCCAACTTTTATTGTAGAAAGAGGGAAGTT GAACATAATGAAGGAATATGATGAAAAGACAATTTGGACAAGTGACCAGGTCCCGCTCATGGCATCCTATAATAAAGGAAAGATGCAGCACTCCCTGTGG GTTGTAGAAATCATCAATTCTAATATTGATGAGTCAACCACTGGTTTGTTAAATGTAGATCCTATGGGTGTATTGCCAAAACATTTGTCATTTCGTAGAA TATGGCAGGGAAAAGGTTCTCAAGCAGCTGCTTATAAGGTCTTTATGGCCACAGATGATGATGCAGCTCCTGTTGTTTGCTTTATTCACCAAGAACAAAG AAAGTTGTTGTCTGTCAGGCTTCAGTGTGTTGAAATAAATAACGAGACTGTGTTTGACGTTAAGCCTGATATGAGCTGGACCATAGCTGCACTTGCAGCT TCACCTGTGACAGTAACTTGCCCTAGGGTCAAAGCTGGGCCACTTCCATATTCAGACATATTGGTTTTGGCTCCGGAAAATGTTCTGCTTCTCTATTCTG GGAAGCAATGCCTGTGTAGATATGTACTACCTTCTTTCTTAAATAAAGATAAGCTTTTGCATGATTTGGAGTTTCCAGAAACATCTTCTCTTTCCAATGA TTTAAAGATTACTGGGCTGGCTGATGCTGTTGATGGGCGTGTCAATGTGATAGTAAATTATAGGCAGGTGTTTAGATGTGCATTACAACAAAGTCCTTCA TCATTATTAGCTAGTGATTGCAACACAGCACTTGCTGAGGGGCTTAATTCTAGTTCCTACAGACATTTTCTTGGTCTTCTCTGGAAAGATGGTGACCCTG CTCATTTGTCAGAGTCAGGGTCTAGTGTTGATTCAGAATGGGAGTCTTTTTGTGGTGTAATTATGCAAATCTGTAGAAAATCTAACATATCTCAAAAGCA GTCAGGTTCAGGGTCACACTCTGCTTGGGACTTCCTTCTCTCTAGTAAATTTCATGATAACTTCTGCAAAGTAAACTCCATGTTTGGAAGATCTTGTGCA GTATTACTTGATCAGCAGGAATCAAATTTCCCTAGATCATCTGTTGTTGACAGACAAAGTTCTGAAAAGCCATTTCATACTGAACTTTTATTAGAATGTT TAGAATCTCTTCATGCACTTTACGAGAGCCTGAAACTGGATAATCTTCGCAAACGGGACTTAGAGCTTCTAGCAACGCTCTTATGCAATATTGCTCAATT TCTTGGTGAGGGCAACTACTTGGACCATTATATTCGTGATTTCCCTGGTCTCTATAAAAAGTTTCTGCTGCATGGAACTAGTTTTTCCCATAAAGTTTCT CCAAGTTTATTCAGATGGCTTGAGAACTGCTTACAACATGGATATGGTTATGCCAATATTAGTGACCTTCCACCTTTAGTCCGCAAAGATGGAAGTTCCG TGGTTAGCTTGGCCCGGAAAATAGTTTCCTTTTATAGTATATTAACTGGTGCTAAATTGCTGGGAAAGAAGCTTTCTTCTGGGGTTTACTGTAACATTGC CATTGGATCACATTCCTTAAATGAGGAACTTACTGTTTTAGCAATGGTTGGTGAAAGGTTCGGACTTCAACAGCTGGACTCACTGCCTTCTGGTGTTTCT CTTCCACTTCGTCATGCAGTAGATAAGTGTCGAGATTCTCCTCCCAATGACTGGCCAGCTGCTGCTTATATCCTTCTTGGTCGACAAGATTTAGCAATGT CAACTTTGGCACGGGAATGCAAGTATAGGGAAATTCAAACACCATCCAATGTGAATGTAATCTCTATGTCCACACCTTATATGCTAAATCTGCATCCTGT GACAATATCTTCTACTATCTCTGATGCAATTGGATTGGAAGGAACAAAGTTTGAAGATACAGATTCAGTTGATGGGTCTACGACTGATGGTATGGAGCAT ATTTTCAACTCTAGCACACAGTTGCGTTATGGTCGCGATCTGAGGTTGAATGAGGTTAGACGCCTTTTGTGCTCTTCCAGACCTGTGGCAATTCAAACAT CTGTTAACCATAGTGCTTCTGATCAGGACCTCCAGCAGGCTCAATTGTGGCACCTTGCACAAAGGACCACTTCACTGCCTCTTGGACGTGGGGCATTTAC TCTGGCAACTATATATACACTCTTAACTGAGGCCTTTACAGTTCCGAAGCTTGTGTTAGCAGGTAGGTTGCCAGCCCAACAGAATGCAACTGTTAATCTT GACCCCAATATCAGAAACATACAAGAGCTCAAGTCTTGGCCTGAGTTTCATAATGCTGTTGCTGCTGGACTTAGATTAGCCTCTCTTCAGGGAAGAATGT CGAGAACATGGATAATTTATAACAAACCTGAGGAGGCAAATTCTGTTCATGCTGGACTTCTCTTTGCTCTAGGATTGCATGGATATTTGCGTGTGCTAGT TATTACTGACATTTACCAGTATTTAAATCAGGGGCATGAAACTACTACTGTAGGATTAATGCTTGGTCTGGCAGCTTCTTATAGAGGTACTATGCAACCA GCAATATCGAAGTGTCTTTATATTCATATTCCCGGGCGGCATCCATCTTCCTTTCCAGAGATAGAAGTCCCAACCCTAGTACAGTCGGCAGCTTTAATGT CTGTGGGGATTCTATATGAAGGTTCAGCTCACCCACAAACAATGCATGTTTTATTGGGTGAAATTGGGCGCCGAAGTGGAGGTGATAATGTTCTTGAGCG GGAGGGTCATGCTGTATCTGCAGGATTTGCACTGGGTCTTGTTGCACTTGGACGAGGGGAAGATACACTTGGTTTTATTGAAACATTAGTGAATCGTCTG TTTCTCTACATCGGCGGAAAAGTTCACACTGAGAGATCTCATTTTTCGACAATCTCAATGGATGAAAATCGTGGTTCTGCACAGATGATGGATGGGACAT CAGTTAATATTGATGTCACTGCACCTGGAGCTACCATTGCTCTTGCTTTGATGTTTTTGAAGACAGAATCTGAGGCTATTGTGTCAAGGCTCTCAATTCC AAATACATGTTTTGATCTGCAATATGTGAGGCCTGACTTCATAATGCTCCGTGTCATTGCTCGAAATTTAATAATGTGGAGCAGAGTTCATCCCTCGAAA GATTGGGTTTTTTCTCAAATTCCTGAAGTTGTAAGATGTGGTGTAGAAGGCCTTGGAGTTGATGGCAATGACATTGATGATATGGATGCTGAGGCTTTTG TACAAGCTTATGTTAATATAGTAGCTGGAGCTTGTATATCTCTTGGGCTGGTATTTGCTGGCACAAGAAATGGAAATGCACAGGAGTTACTTTATGAATT TGCTGTATACTTTCTTAATGAGATCAAGCCTGTGTCCCCACCTAGTGGAAAGGTTTTTCCAAAGGGACTTTCTCGCTATGTTGATCGGCCCACATTGGAG ACATGCCTTCATCTTATAGTTCTTTCTCTATCTGTGGTTATGGCTGGGTCTGGACATTTACAGACCTTACGATTGTTGAAATTCCTAAGGAGCAGAAATT GTGCAGATGGACAGTCTAGTTATGGCATTCAGATGGCTGTAAGCTTAGCTATTGGCTTCTTGTTTCTTGGTGGTGGAATGCGAACATTTTCCACCAACAA CAGTTCCGTTGCTGCTTTGCTCATTACTCTATATCCACGCTTGCCTACTGGTCCAAATGATAACAGATGCCACCTTCAGGCATTTCGCCATTTATATGTC CTTGCAACAGAGGCGCGATGGATTCAGACGGTAGATGTCGACACAGGTCTGCCTGTTTATGCTCCTCTTGAAGTCACAGTCAGAGAAACTGAACATTATG CAGAATCTAGCTTTTGTGAGGTTACCCCTTGCCTTCTGCCAGAGCGAGCTATTTTGAAAAGAATACGTGTTTGTGGGCCTCGCTACTGGCCTCAATTAAT AGACTTTGCTCCTGAAGATAAACCATGGTGGAATTTTGAGGACAAGAAGAATCCATTTAATTCTGGTGTTCTTTATATCAAGAGAAAAGTTGGAGCTTGT TCATATGTTGATGATCCCATTGGTTGCCAGTCACTCCTGTCACGGGCTATGCACAAGGTGTTTGGCCTGACAAGTTCGGAAGCATCTGATACAACCACCA ATATCCATAGTGGACCTGGTTCTGTTACAGTTGATCAGTTGGTTGGTACCTTCTCATCTGATCCCAGTTTGATTGCTTTTGCACAACTTTGCTGTGACCC CTCCTGGCATAACAGGTAAGCCTGCATTTCTATATTACTTTTCCATCCCTTGTCTTGGATCCATTTTGGTTGTTATATATTTGGTATTTCATCCTATTTC TTTAATTTATGAAAAGTTTCTTTAAAGTTTTTATTAGAATAGTGGCAAGGGGTTCATATACATATAGGACCCTCTAGCTGTGCCTAGAATTAAAAAATTT AAACACTAAACATAGACTAATTCTGACTGCTCATCCATGCTACAAAATTCTAGAAATTTTATAGTGTGTAGTATTGAGTTTTACTCTTACTGATCAGATC ATGTAATCTTTAGTCGTGCCTTACTTTTTGAACAATTATTACAGCATGTTGCATGCTGAAAGTATTCTCAAGGGCGAGGTCGCTTTTATCTATCTTCGCA TCATAATTAACTACAGAGGATTGACAGATTTCTTTCGAGGGGCTTTGTTTTCTTTTCAGGCTTGCAAACCATTTATATTCTGTTATTCCCATATTTGTAT TGAAGATCATAGATAATGAATCATAGATGTTACAACTAAGGATGATGCGATATCTAAATAAACTAATGAAACTTGCTTGCAGATCTGATGTTGATTTCAA GGACTTCTGCTTGCAAGTATTATTTGAGTGTGTGAGCAAGGATAGACCAGCTCTTTTACAGGTCTATTTGTCATTATACACTACAGTTGAAGCAATGGTT AATCAAGTTGGTACTGGTGCCATTGTTTTTGGTGACTCACTTTCTATATCGGGTTTTAAGCTTGGTCTGATTTATATCGAAGCATTGATGACTGGAAAGT TATGTGCTTCAAAAGGAGGAATCGTGCAATCAACGTTTGTTGGTTCTCTAAGGAAGCAGGTGGAAGAGCTCCTAAATTGTTCCCAGACATTGAAGGATGA TTTTCATCAATATTTGAAAATGGGGAAATGGCCTGATGGGGAATCCTCTGATAAACGTTCAATACTTCTTTCTTGGTTCCTTCAGTGGTTTGATGTACCA GCTTCATCTGTAGTCAAAACAACTATCGATAGAGTCAAACCCATGCTCATGTCATCATCTTCAATTCCGTTGTTGCGCCTGTCTTTTCCAAGAACTCATA TCAATGCTATTAGCGAGATAGATAAATGTTTATCATGATCATAGGTCACTGGAAGCTTGGTACTTAAGTGTATATGCATTTTGATCTTACTGAAGTTTTG ATTATCCAGTTTTAAGGGTCTTGAGTTGTAGAACTGCTTGCACTGAGAATGCAAAGAGCAAATATTGATGAGCACTAGCTGCAATTTCCAAATTAAACTT AGTAGTATCTCCTTATTTTTAGTATTCAAATATATTGTGATCACAAGCTGGTTTTGTTTGGCCATTTTTTTAAAGGATCATAAGCTCAGCCATCAGTATC TGTGTCAAAATTAGATGCATTCTAAAGTAATTATTTAATAGCAATTGTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_31547; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_223237
| Blastp | Anaphase-promoting complex subunit 1 from Arabidopsis with 59.34% of identity |
|---|---|
| Blastx | Anaphase-promoting complex subunit 1 from Arabidopsis with 59.22% of identity |
| Eggnog | Anaphase promoting complex subunit 1(ENOG410XQ83) |
| Kegg | Link to kegg annotations (AT5G05560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433711.1) |
| Pfam | Anaphase-promoting complex subunit 1 (PF12859.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |