| Id Trinity | FTRINITY_DN53303_c2_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_244896 |
| Sequence | TTTACGTGTTTTAAACTCACTCATCATCTTAACAATCAATTTTAGAGAAATCGAATGGTTTGAATTAATTAATAAATCTAAATTATTAGATTTATAATAA ACTGATGGCTAAGAGTAGAGTGAACTTTCCATGAAAAAGATCTGTATCAGCATGTTCTATTTGGATAGGGACACGAGAAGAACCCACTTGGTATTAAAAA AATAGAGAGATTTACATAACTCACTAGAATTAATCTTTCGAAATTTGTGTACGGTGGAGTATCAAGTAGTATAATGCTGAATGAGAATATACATTCTTTT TTTCTCTTTTCAAATATTACCAACAAACCTGATATGAACACTGCAAATTGGTCTGCGTGGAAATGACATATAATTGTTGGATTGTGAAACCCTAATTCCC AATTGAATGGAGGAAGAGGGTGTAATAGAGTCTTCAATTCCAGATGCAAGTGAATGTGATGTCTCAATTCCAAGGGGTGGACCCATTTATGTTCCTAACA TGCTTTCTCCTTCCACTACCCTCAACCATTTTCACTCTTCTCTTCTCTATCAACTTCAGGATATAGAAGCAGAGCTACTTAATCATCTTCATCATGAACA TGAACATGAAAATGATCTCTCCGTTCATGACCTTAAACTATTCACAGACCATGACTTAATGGATATGGCTTTGAAGCAACTCTTTCATGACAGGGACAAC AACAGCAACAACAACAACAACAACAACAACGAAAATCAGCCACCACTTTTGGACCAATCCAATGCCAACAACTCTACAACAAAGAGAAAGAGAAAGACAA GAGGATCAAATAATGCCATTCTTCAAAGTGATTGTCTAGAAAAGGCGGAGCAAATTGTGAGAATTAAACATAAGCAGGAAGAAGACAAGGAGGCAGTCAG ACTTAATTCATTTAATCCTGCTTGCAAGATCACTGAATCAGCTCAAAGTTCTACAAGAGTGGAAAGGATGAGATCCCTTAGGTCTACGAGTTCCATTAGA AAGGTCAACACAGTGAACCTTCAGGAACAGATACCTGTGCAGCATCCAGAGGTTGTTCTATCTGTTGAAGTTTACCATAATGTTCGAAAGCGTGTCAAGA CCCAGGAGTTGTTAGTTCTTGGAGGACAAACTCTTAGTGCTTTAAGGGACAAGATCTATTGCTCAATGGACCATGTGATGCAAAAAGCTGGGCAGGGCGA CCCTTCTGGTTATTTTCTCATTGAAGATGTATTCTACAATGATTTGAGGGATCCATCTGCTATTGATTATTCCAGACCTATACTGGATTGGCTTCAAAAC TCCAAGGAGGAGGTACAAAAGAAATGGGAATATATTATGAATGGGGAAGTACAGCAGAAACAAAAAGCAATCATGGGAGAAGTATCTGCACCAGACTTGC CTCACTTCACGTCCGTGGAGATGCACAAGATACGTTTTTGTGACTTAAGAATTCGACTCGGCGCTGGATATCACTATTGTCATCAGGGTGATTGCAACCA TACCTTAGTAATACGAGATATGAGGTTACTTCATCCCGATGATACGCATAATCGGGCTGTTTATCCAATAATCACTTTTCAACTGAAGTTGCGTTTTCAG AAATGTAGCGTTTGCAATATATTCAGAGCTACAAGGGTTACAGTGGAAGACAAATGGACGCCAAAAAACCCTTGTTTCTTTTGTGATGAATGTTTCGCCC TACTTCACCTTGATGAGGATGGCTCTCCATTGTATCATGGCTATAAAGAGTACGATTATAACCATGAGTAGTTGTTGTTTGTTAGCCTAGGATTGAACAA GTTTTGGCATTTTAATCGAAATAAGCATTGATTGGCTCAATCTCTTTTCCAGCTGAAGCAACCATAAAGAAACTCCAAGATAAATGGGATGTTCCCAGGG CCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_32521; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_244896
| Blastp | snRNA-activating protein complex subunit from Arabidopsis with 52.53% of identity |
|---|---|
| Blastx | snRNA-activating protein complex subunit from Arabidopsis with 52.53% of identity |
| Eggnog | small nuclear RNA activating complex, polypeptide 3(ENOG411090A) |
| Kegg | Link to kegg annotations (AT1G28560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426800.1) |
| Pfam | snRNA-activating protein of 50kDa MW C terminal (PF12251.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |