| Id Trinity | FTRINITY_DN54040_c2_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_141028 |
| Sequence | TCTGTAATTTCAACTCGCGGTGTCGAAAATGGGAAAGGGGTAAATTTTGCATCTAGGGTTTATGCTTTATATTCAACACCATCATCAAATTCTCTTCCAC AACAATTCATAAAAAAAAATTGAAAATTTCTGGTTCTTCACTGCATCTATGGCTTCCAGGGACAAGGAACAAGCTCCTCGGAACCATCACCACCATCTCT TGAGCAGCCTCGTCGTCCGCCCCGAAGTCACCTCCGTCGCCGATACCGGCGCTGATCGCGGCGGCGATTTCGAGCCCGGAGAATTCCGCCGTGATCATCG TTCCCCTTATTCCCGCTCTGATCGATATTCGGGTGATGCTGGTCTGTTCCCTCTCTTATTACTCATCTATGTCCTTAATCAGAGTTAGGTTTTTAATTTT TACGTTTTGGAATTTATATGAAGAAAGTGGTTCTGTTCATTAAGATTTGTTTGTTTCTGGTTTTGTTTTGTTGTTAATTTATTTAGTGCCTTGATGTTAC AATGTGTGTTCTTTTTTAATTTCGTAATTAGGGTTAGGTTTCCAGTTTTCCGTTTTGGAACTTAGACGAAGAAGCTGGTTCGGTTCATTATAATTTGTTT CGCTGTTGTTTTTGAATTTTGGGCTTCGAGTTCTGATTTTTCCCTGTTTTTTAATCGAAAACTTTGTTGAATATCTTTTTGTGGTCTTCGAGGGAGTAAA AGTAAGGACATAAATATGATAAGTTTTACATTTGATGGCACTAGTATACAATAATTTAGCTATTGTAAATATTTTGTTGATAACAACAAAAGATGAGAAC AATTGAAAAGCATTGTGTTGTTCATAGTTACCTTAAAGACCCACATTTGACATAATTTTTGAAGTCTGCAATGGTGTAAGCATGATTGTCAAGTAGACTG TAGCAGCTAAATTTGCTTTTGAAGATTTATTTGGGTCTGAGTGACACGAAAACTGCCATTTTTTCTCTTGACATTTTTAGTGTCACTCTCTATAGAATCT ATACAGAGATAGGTTTTGTTACACGTTGTGTATTCATTATGTGCATGCCAAGCATATGGATCTCCTATCGATTATAGTATGCCAACAATGAATAAATTTT GCATTTGTGTGTTACAGCTCTGATGATGAAGGCCTGTTGCTGTGAATTCAGTTTTGGATCATGATCTGGGGTTGTTTTTTAGTTAAAAGGGTTAATAAGT GTGTTGGATGATGGAAATAGTCCATTCTGCGTGAGAACTTGTGAGGTTTTGTACCATGAAATCTGTTCTATGGGTTCTCATTTTGCTGAGTCATGGTCAT ATGTTTGATTTGGATCATTTGTGAAGACAGTGTCAAGTTTAATGGAATATGGGATAGAATCACACGGTACCACGTGACTATCACTGTGGTCACATGATTT GTCGAGGACTACGACTGACCACTGCTATTTGTTTTTGGGGAATAAACTTACACTATAACCAATGTTTGTCTGCTATATTTGGGTTCCATGGGGTATATTT GGGTTCCATGGGATATATTTAGTTTCCACCGCAAGAAGTTCTTCGTAGCTGGATGAAATGCTTCCATTACTGAAACTGATCTGACATTATGGAATGGGTT TATCTGCATGGGTCATTGTTGTGAAAATTTGTGAATTATGTTGCTTTGAATCTACCTTTGGGTGGCGCAGCATACTGGGGAGATGGTTGCAAAAACAGTC GAAGTCTCAAAGAGGTGGTTGATGGTTGCAAGATACCAAACTTTGGGATTCTTCACTCTGTTGTGGCGTTTGTTGGTGGTTATTTCTTTGTGGTGTACTT TCTGTTCTTATGCTCCTGAATATGATCACTTTCTAAAGGGTGAAATGACATTGGTGTATTGTTTGTCATGTCGGATTAGGTTTTTCTATGGGTGTTAGCT CATACTTTTGTCGAGGTTTTGAACTTTGTTCTTATTTTATCCTGTAGTGCATAGGTCCAAAATTTGGATTTGATATTTCTGATGCTTAGGTTAAATGATA TTTGTATGCTTAACTATATCATGGTCTGACATTGCATTCAGAGATTGATAGAATTGAGATCAAGGATATAAAAGAGGTAGCTTATGTGTCACGGAAAGCC CTGCCCATAGAACCTGTTTGCTTTTTGGTAATATGGATCAGGTGTTTGTAAAGTGACATTGAAGGTGCTATCAATAAACTTCCTGCACTTTTAATTTACA TATCCTTGAGGAGGAGAAGCCCTGTGTGGTAGTAACCTTCCCTTTGAAATGTCAGGGTTATATGGCAGTTGCATGATCACAAGTTTTTGGATTCTACAGT AGATTGCAATGCTAAATTTTGCCTCAAACTCTGTAAGTTGCTTATTTTCAGATTTCATTGTCTTTGTTTTCCCAGGGTATAGAATTCGCGCAGGTTCTGC ATCTCCGGTACACCGTAGAGATGCAAATCACCGCTTTGGTTCTGATTATAATCACTTATCACAAAGCCGTGGATATGGCGGCGGGAGAGATCCTGGTAGA TATAGAGATCCTTCACCTCCTTATTTTCGAGGAAAAGTAGGTGGCAGACCAGTTGGTAGAGCTTTTGACAGGCCTGGCTTTGTTCCTGGGCTAGCTAGAG GAGAAGGGAACAGTAGAAACAACCCTAATGTTCGTCCAAGGGAGGGTGATTGGATTTGTCCTGATATCCGGTGTGGTAATCTTAACTTTGCAAGGCGTGA CTACTGTAACAAGTGTAATAGGTCTCGACCTGCACCCGCCGAGAGTCCCCGGAGGGCATATCCTGGTCCTCCACCACTTCGTAGTTCTCCTAGACGCTTT CCTGGTTCCCCAGAAAGGACTGTGATTGGCTATAGATCTCCTCCTCGTGGGTTGGCAAGGGATGGACCTAGAGAGTACGGATCTGCTGCTCTGCCACCCC TCAGGCATGAAGGCAGGTTCACAGATCCCCATCTGCATAAAGACAGGATCGATTACCTAGAAGATGCTTACAGGGGGAGGAACAAGTTTGATAGGCCACC ACCCCCACTAGAGTGGGAAAGTAGAGACCGTGGAAGAAATGGTTTCTCCAATGAGCGGAAAGCATTTGAGAGGAGGCCACTGTCTCCCCATGCACCACTG TTGCCGTCACTTCCTCCACACCATGGTGGTCGGTGGGCTCAGGATGTTAGAGAGAGGAGCCGCTCTCCAATAAGAGGCAGCCCGCCACCAAAAGATTATC GCCGTGATATGTTTGTGAATCGAGGAAGAGGTGATAGACGTGCCTTGGGACGTGACAGAACTGGAGGAATGTATTAGCTGCTGGACTTGCTGCAATTTGT GATGTAAACTGTAGCTCTATTAAATGTTGAAGCTTGTTAAGTTAAAGAGATTAGTTCTTGAATCTCAGGATTAGGGTAACGTACTGAAAAACCATTGTTC TGAATTGCTTGACATATTTAGGCTTTTGTTCTAATCTGTATACTGTTTGAAAAAGGAGAATACACAATTTTTTGACTCCAACTTCTGGATCTCCACTCTA TTTTTTAAATGATATTTGGTTGCCTGTTTATAGATTATATTCTTGAGAATGTGATACATGAGAGAATCACTTTCTAACAAAGGTGAGAATTAAGTTTTCA TTTCAAGGAATGTAAAATGTTTTCATTTAGCTACATTATTTCTTAGCTATTTTAGTGAAATTGGATTTCTTAATTTAGATTAATTCATTATTTATTGTGT CATAAGATCTATTCATGTAGTTACCTCATTCCTCAAACGTTTTTACCCGGTAGGCCAAGATACGTGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_39175; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_141028
| Blastp | Zinc finger Ran-binding domain-containing protein 2 from Sus with 56.41% of identity |
|---|---|
| Blastx | TATA-binding protein-associated factor 2N from Homo with 64.29% of identity |
| Eggnog | Zinc finger, RAN-binding domain containing 2(ENOG4111QXA) |
| Kegg | Link to kegg annotations (733651) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448374.1) |
| Pfam | Zn-finger in Ran binding protein and others (PF00641.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |