| Id Trinity | FTRINITY_DN54974_c1_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_102540 |
| Sequence | CAATAAATGAGAACGACACTGAGAGGGTTTTGAGTTTTGACCTGAGACTTTCTCTTACACTTGCAGCCTCACTGTTGTTTTTCAGGAACATCGATGGCGG CCTCACACCTCCTTTATCATTCTCCTTCCTTTCCAAAAACCTTAAATCACTCTTTGAACCAAAACTCTTTCGCCCGAAACCTCGTTCTACCTCTCAAAGC CACCTTTAAACCACTGGTTCTTAGAGCAGTTTTGTGTCAGAGTAACACTGCTAAACCCCAATTACATGACTCCCAGAGTACCACTAATTTTCAACACTGT TTCACCAAGTCTGAAGATGGGTTTCTGTACTGTGAGGGTGTTAAAGTGCATGAGATTATGGAATCTGTTGATAAAAGACCTTTTTATTTGTACAGTAAGC CTCAGATTACTAGAAATGTCGAGGCCTATAAGGACGCGTTGGAGGGATTGACATCTATAATCGGTTATGCTATCAAGGCCAACAACAATTTGAAGATTCT GGAGCATTTGAGGCACTTGGGTTGTGGTGCTGTGCTTGTAAGTGGGAACGAGCTTAGGCTGGCGCTTCGTGCTGGGTTTGATCCCAAAAGGTTGAATCAT ACTCAACCCATGAATTTGTCTACGACTCTACATTTGTCGATGTATTTATGTTTTTAAGGATCTTTTCTGCATAGATATCATATGAGCTTTTTTTACCATG TCAGCTGCGTATAAAGGACCCCATTTGGAACTTTCTGACCTTTAGTTTAAAATTACATTGTTTGTCATTTCTCTGTAACTGGTTCTTTGAAACTTTTTCT CATAAAAATGTTTCATAATTAGTGTATTTATGGTCAGTAACTGAAAACATGGATGAATAGGTGTATCTTTAATGGCAACGGAAAACTCTTGGAGGATCTG GTCTTGGCTGCCCAAGAAGGTGTTTTTATCAACATTGATAGCGAATTTGACCTGGAAAACATTGTAGCGGCTGCAAGAATTGCTGGAAAGAGGGTCAATG TTTTACTTCGAATAAATCCTGATGTGGATCCACAGGTCCATCATTATGTTGCTACTGGGAATAAGAACTCTAAATTCGGCATTAGAAATGAAAAGCTGCA GTGGTTTCTAGATGCTGTGAAGGAGCATCCTAATGAAATAAAGCTTGTAGGGGCCCACTGCCATCTTGGGTCAACAATTACCAAGGTGGACATTTTCAGG GATGCTGCAACTATTATGGTTAACTACATTGACCAAATCCGAGCCCAGGGTTTTGAAGTTAATTATTTAAATATTGGTGGTGGACTTGGCATCGATTATC ATCATTCTGGTGCTATCCTTCCTACACCCAGAGATCTCATTGATACTGTGAGGACTACCCCAGATATCTCACTGTGTCTTCCCAATTCTATGTCATTATG CGCTAAGTTTTCAATTCCTTATAAGACCGAGGCATAGCTATTAACTGATAAATGGGGATTATAAATATTGCAGTGGGTACATTTAAATGCAGCATTTTGT AAGTTGTGACATGCTGGGTCATGTGGAAAACAAGTCCTGTGAGAATTAATACATTTGCATGAATTACATCAATGTATAGTGTTTGTATTTGATGGACTAG ATCACTGTCATGTTTTGTAATGCATGTATTGTTGGTGGTCAATTGTACTCCTATGAGTTAACTGATTTGATAAGGGGCTGAGTGAACTTCCATGCCTGAG AATTTCTGTAGGATCATCTATGGGGTTTGGGTCTCTCTTTAGTCACTTCACTTTTGGCTGATAATGGTTTTGGTGAACACTTGTTATTTGTGATCAGTGA GTAGTTCATATGTGATATATAATATTCATATACTTGGATTACATGTGTTATTTATTTATTTTTGTTTCACATTTGCTGGAAGAGGTACCTGCATGTTTAT TTATGCATATCCTTTAAATCATATAGAGGAACATATTCTGCTTCTTTCTTATAAGTGTCTGTTAATTTCACTGAATTTGGTATGCTCTACTGCAATCTAA ATGCTTTCCAATAAGAAAGATGCACTTTTTTTTTCTTGAAGTGTTCCTGCTATTTCTGTATTTGCTAATTCATGGCTGGACTAGGTACGGGAGCTTGTCC TTTCACGTAATCTTAATCTCATCATTGAACCTGGGAGATCACTCATTGCAAACACGTGTTGCTTAGTTAACCGGGTGACGGGTGTCAAAACTAATGGATC TAAAAACTTCATTGTAATTGATGGAAGCATGGCTGAACTTATTCGCCCTAGTCTTTATGATGCTTACCAGCACATAGAGCTGATTTCCCCTGCCCCAGCA AATGCCGAGGTTGCGAACTTTGATGTGTTTGGCCCTGTCTGTGAGTCTGCAGATTTCTTAGGAAAAGATAGGCAGCTTCCAACACCAGACAAGGGTACTG GTCTGGTTGTTCATGATGCTGGTGCTTATTGCATGAGTATGGCATCAACTTACAATCTAAAGATGCGGCCTCCTGAGTATTGGGTTGAAGACAATGGAAC AGTGAGCAAAATCAGACATGGGGAGACATTTGAAGACCACATCAGGTTCTTTGAGGGGCTTTGAGTGAAGACTTCATTTACTGGTGCAAATTGAAGCTTG TGATTTGTTTGTACCTTGTCTTTGGGCAATGTCATTTATAGTTATGTTTCTTCTTTTCTGGTTGAATCCTGACACTTTGAAAGGGAAAGTATGTTAGAAA AATTCACTATCTGAATTAAAATAAATTTTATGGTGGTCAACATGCATATTTGGTGCATTCAACTACAACTAAAACTTGATTTAATATGTCCTTTCAGTTT ATAGCTTCAGTTCTCAGTAAAAGCAAGTGTATGATCCTATTAATTTGATGACTATTACTATTGAAAGGACGGCGAGGTGCATGAAGCTTATATAGTTAAT GGGGTCTGAGATAATTATATAAATGAGCTACTGAGGGATATTTTTTTGTCATGTGTAAGAAAATATTTAATTATTAAATTTTTAATTTAAATATATTTTT ATATTTATTTGTGTGTTCCTATCACCGTTTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_47445; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_102540
| Blastp | Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 77.42% of identity |
|---|---|
| Blastx | Diaminopimelate decarboxylase 2, chloroplastic from Arabidopsis with 77.42% of identity |
| Eggnog | Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (By similarity)(COG0019) |
| Kegg | Link to kegg annotations (AT5G11880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431286.1) |
| Pfam | Pyridoxal-dependent decarboxylase, pyridoxal binding domain (PF02784.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |