Ll_transcript_103360

• Id Trinity: FTRINITY_DN54982_c4_g1_i8
• Name Transcript: Ll_transcript_103360
• Sequence: ACAGAAATTTCATCAATCTATGTCCCTACCAACTTTACCAAATGCATAATAATGAAAAACGCAGACCATAATTATGTAGCTATGAAGCGAATTTTATAAT ATAACTTGGCCATCAAAGACTTTTATCTAAATCTCTTGCTTCTTGGAGTCATTTTCTTTATTCAAGGTGCTTAGATCTCTATAGAGTTTCTAGAATCAAG AAAGATTGTTCCAACATCATAGATGGCACAACCAACATCATCTTCATTCCTCCATAGATGGACTTATGATGTGTTTCTAAGTTTTAGAGGTGAGGATACC AGAAATGGTTTCACTGGAAATCTTTATAACACTTTGAGTCAAAGGGGAATTCACACATTCATAGATGATGAAGGCCTTAGGAGAGGTGAAGAGATTACCC CAACACTTCTAAAGGCTATTGAAGAATCTAGGATTGCAATTGTCATATTCTCTGAAAGTTATGCATCTTCAAGGTTTTGTCTTACAGAACTTGCTAAGAT CATTGAGTGTGTAAATGGCAAGGGAAGATTACTTTTACCCGTTTTCTATGGCGTCGATCCATCAGAAGTGAGACATCAAAGAGGGAGCTATGGAGAAGCA TTAGATGAGCATGAAAAGAGGCAAAATGTGGAAGAATGGAGACTGGCTTTGCATAAGGCAGCAAACTTGTCTGGTTGGCATTTCAAACAAGGATATGAAT ATGTGTTTATTGGAAATATTGTTGATGAAGTCTCGAAAAAGCTTAATCGTGTTCCTTTACATATTACTGATTACCTTGTTGGGATGGAGCCTCGGATACG AGAAGTAAACAAACTTCTTAGAGTTGGGTTTGATGATGACCAAGTGAAGATGGTAGGGATTTGTGGGATTGGTGGAATAGGTAAAACAACAATTGCATAT GCTGTATATAACTCAATTGCCGATCAGTTTGAAGCTTTATGCTTTCTCTCCAATATTAGAGAAAAATCAAATAAGAATGGTCTGGTATCACTCCAAGAGA CACTACTACTAGAAATGGTTGGGGAGGATATTAAGTTGGGAGATGTGAGTCAAGGAATTCCAATTATAAAAAGGAGGCTTAATCAAAAGAAAGTGTTATT GGTTCTCGACGATGTTGACAAATTGCAGCAATTACAAGCATTAGCTGGAAGGAGTGATTGGCTTGGTTCTGGTAGTAGAGTCATTATAACCACAAGGGAT AAGCATTTATTACTTGAACATGGAGTTGCAAAATTATATGATGTGAAAGAATTAAATAGGGAGAAATCTTTTGAATTGTTTACTTGGCATGCCTTTAAAA GTAATAAAAATGATCCAAGTTATGTGAACATGTCAAATCGCGCAATTCGTTATGCCAATGGCCTTCCATTGGCTTTGTGTATAATTGGTTCTAACTTGTT TGGTGAAGGCCTAGAAGAATGGGATTCAACATTAGATAACTATGAATCTGGGACAAATAAAAGTGTTCAAGAAATACTTAAAGTAAGCTATGACAGTTTG GAAGATAATGAGAAAGGAATTTTCCTTGACATTGCTTGTTTCTTCCAAGGTCAGAGAATAGAGTGTGTCATCGACATGTTGCTACATGGTCGTGGCTTTC GACCAGAGTACAGTATCAAAGTTTTGATGCATAAATCTCTCTTAAGGGTTAAATGTGGTCATGTAAGTATGCATGATTTAATAGAGGAAATGGGAAAAGA AATTGTGAGGACAGAATCACCAGTAGAGCCCGGCTACCGCAGTAGGTTATGGTTTTATGAAGACATTATTCATGTTTTAGAAGAAGACATGGGAACTGAA AAAATCGAAGTCATGATGTTGGATTTGCCTGAAGATGAAGAAGTATGCTGGACAGGGGAGGAATTCAAGAAGATGAAAAACCTCAAAATACTTAAGGTTA TAAATGCAAACTTCTCCACGGGCCCCAAATATCTCCCAAACAGTTTAAGAGTGCTTGATTGGAGGGGATATCCATGGCCATATTTACCCTCTGATTTTCG GCCAAGGAAACTCAACATACTCAACTTGCCTAATAGTAGTCTTGTATTGAACGCTCCCTTAAAGGTTATACATATTTTATGTCCTTCATTTTTTTATCCT TTTATATCGCATATCAATAGACTTGGATTCAAATTAATTAAACTAATTTTTTCTGTGAACATGTAGAGTTTTAAGAGTTTGAGTCACTTGAATTTTGAAG GATGTGAATCTTTAATACAACTACCCGATGTATCTGGCGTCCCAAACCTAATAGAATTATGCCTCGATGATTGCACGAATTTGATTGAAGTTCATGATTC CATTGGATTTCTTCCTAAACTCAGAAAGTTGAGTGTTCAAGGATGCACTAGGCTTAGCAAATTTGCATGCAGTATCAACTTGACATATCTTGAAACTCTC TCTTTGTATGGTTGCTCAAGTCTTAAAAAATTTCCAAAAGTTTTAGGAAAGATGGAGTATCTAGAAGATGTTGATTTAGGATCCACTTCAATAGAAGAAT TGCCATATTCAATACAAAATCTAATTGGTCTTAGAAGATTGGACTTGATCAATTGTAAAGGGTTGATTCAACTGCCAAGTAGCATTTTCATGTTACCAAA ACTTGAGTCATTGGAAGCTGAATCATGTAGCGGGTGCCAAATATTAAACAATGATTGTGAAGAAGAAGAAAGTGTGAGCTTAATAGACTCCTCAAAAGTG AAAGATCTTCACTTCAGAGCATGCAATTTGACAGATGAATTTCTTCTTATTTATCTCACTTACTTTCCCAACATAGAAATGTTACACCTAGGCAATAATA ATATCACAATACTTCCTTCATGTATTGAAAAGTGTCTCTATTTGGAAAGCCTCTATGTGGATGACTGCAACAAGCTTCAACAAATTATGGCACTTCCACC AAACATTAAAAATTTCTCAGCAAGGAATTGCATATCCTTGACTTCAGATGCAACAAGCTTATTATTGAGTCAGGAAATACACGAGGCACGAAGCACGCAT TTTATTTTTCCAGGAACAAAAGTTCCAGATTGGTTTGACCATTGCAACAAGGGATCATCAATATCTTTCTGGTTTCGTAACAAATTCCCAGCAATTGCTA TGTGTTTTGTTTTCGGATGTTTAGACAAAGAGCCAAGACATTTGAGGTCCAAGTTCCATGTGTTCATTAATGGCAAGCCACCATTCTATTCTAATGATAG TGATAGTTTCATAATGCTGAGAGATCATACATATATCTTCGATCTACAACGAGTAGTGGAACTTCCTACGCATCAACTTGATCAGGTAATTTTCGAAGAC GAGTGGAATCGTGTGGAGATTCATTGTTTGGATAGTCGAAACGTTTTAAAATCGTCGATAGGTAATGCTGTTGTTAAATGGAGTGGTGTGTATGTGTATA AGGATGGGAATAACATGGATGATGTTTGGTTTCTTAGTACTAATCCTCAAAACAAAACTTATGTTGATTTGGTGGAACGTTACCCGTGGATCAAGAAACA ACATAACAATGGTAAGAATCAAGATACAATTTTTCTTTTGGATTGATGAAAATGGATGGGATGAAGTGTAATGTAATGGTACTAGGATTACTTGTTTGAA TTGATCAAATAGGATGAAATGGATTGAAACTATATCATTCAATATCTCTATATTTATTCTATGTTAATTTGGACAACGATCTGATGTCTCAAAGTCTGTT CGAAACTAATAACAACATGTCACATTAATAAAT
• Tissue: flowers
• Gene name: LI_gene_47525;
• Additional information: details;

Expression of Ll_transcript_103360

FPKM

• FPAB: 0.5
• FPNAB: 1.8
• LF1: 0.2
• LF2: 0.5
• LF3: 1.6
• LF4: 0
• UF1: 0.8
• UF2: 0.3
• UF3: 0.5
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_103360

• Blastp: TMV resistance protein N from Nicotiana with 39.84% of identity
• Blastx: TMV resistance protein N from Nicotiana with 33.24% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: mtr-MIR2609b (MI0011863)
• Ncbi protein: Link to NCBI protein (XP_015950656.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;