Id Trinity | FTRINITY_DN54998_c5_g1_i9 |
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Name Transcript | Ll_transcript_102648 |
Sequence | TTCATCTCCAAAACATAACACCCTCTTTTCTTCTTCTCCCTCGAGAATCAAGAACTACCATCACCAATGTCGCAGCAACAAGGTCAAATTCCGATAAACC CCTTGATTCCACAGCAGAATTCAATCTCACAACAAATCCCTATTCAATACCAATACCCAATGCATATGCAAATGCAATACCCTATGCAGATGCACGTGCC CTATCACATCCCATTCCAGATTCCATACTCCGTCCAAGACGCCGCCGTCACCGCCGCTGGTTCCACCGGATATCCAATCTCATCTGCTAAGCGCCGCCGT GAGGACGAGGCCCTGGGAACCGATTCAGCGGCGGAGCTGTCGGCGGCGAAGCGTGTTAAAGGCCAGGATGTGATATTTAGGATCATTGTGCCGGCGCGGC AGATCGGGAAGGTGATTGGGAAGGAAGGTTGCCGGATTCAGAGGATCCGGGAATCGACCAGAGCCACCATCAAAATCGCCGATGCTATTGCTAGACATGA AGAGCGCGTTATCATTATTAGCTCTAAAGACAACGATGAAAAGATTACTGATGCAGAGAAAGCTCTAGAGCAAATAGCCAATTTAATTTTGAAGGAAGAT GATAGCAGTCTTGATGCATCAAAAGTTACTGCAGGGCATGTTGCTGCCAATACAATAAGACTTTTGATTGCTGGAACTCAGGCAGGTGGATTGATTGGGA TGTCTGGTCAAAACATAGAGAAGTTGAGGAACTCCTCTGGTGCCTCAGTTACAGTTCTTGCACCGAATCAGTTACCTTTATGTGCTTCCGCTCATGAATC TGATAGAGTAGTACAGTTATCAGGAGATCTTCCTGCAGTAATGAAGGCTTTGGAAGAGATAGGTTATCAGTTAAGGGAAAACCCCCCAAGACAAGTGATT TCAATTAGCCCAACTTACAATTATGCTGCAATCCGGCCATCCCAACCATATCTTGATCCATCTTCAGGTTATTTAATGTTTTCTATATTAGAGCAACTTT TTGCTGCCATTTAGAAGTTATATTAAGTTTTGAATATTGTCTTACAACCACTTCATCTCTAGGACAACCAATCTTGCAGTTGACTATGTTACATTCGAGA TGCTGATTTCGGAAACAATGGTTGGGGGGTTGATCGGCAGATGTGGCGCGAACATATCAAGGATCAGAAATGAGTCTGGAGCAATGATCAAGGTTTATGG TGGAAAAGGTGAACAAAAGCATAGGCAAATTCAATTTGGTGGTAGTGCCGAACAGGTAGCATTGGCAAAACAGAGAGTTGATGAATATATATACTCTCAG TTAATACAACAAACTGGTCCCCAAGAATCAGGGTAAGTGTTTTATGTTAAGAACTAGATTTTAAGCCCGTGGCCGGTGCAATGTACAAGTGCCTAGCGGT TATTATAGAAAATATCTAAACAGACACACACGCACACACACATATATATATAATTGTCTATCTTTGCATGCTTCATGTCTAGATTAAAAATAAAAATAAC CACCACATACCGATATAAACATTATAAGTCTTACATGACATGAAATTTTCTTAAGACAATAAGATACCACACATTTGGGTTTTTTGTTTTGAAGAAGCTT CTGACCCTAAATATATGTCTAAAGTCTGGATCAATTTAATTCAAGTGAGGTAGTTATGTTAGCAGGGGTTGAAGAATACTAACTGCTTCAGAAGAGAAGA AATTTAACTTAACAATTTGAAGCTAAAACACGTTGAAGACATTTAAATATTGTCCTTTATAATCCCACACGTTTTATTGGTGGCAGGTTTTGGGATTATT ATTACTGATGTTCAATCTCAAATGGTTTACTATTCCCTCTAGGTAGTCAATCGCGTGCTATCGCACTGAGATAGTGGTGAACGATGGCTGTCGGCCCTTC CGCGTGACAAAACGGTGGTCTGCGGTGCGGATGGCCGTCATGCCTGTTGCGGATCAAATAGTGAAGTCGCGAGTCAGTACCTGCTACAACCTTGCTTCAA GTTGAACCCTAGTTTAAAGCGGGAAAGTCTTTGTTGCCCTTGTTTTTAATACGTGGCAAAGGTTTTTAGTGTTTCTGGTAAATTAACTGTTCCTTTCCTT TAGTAGCAGCAGCAGCAAAACACGGATAACACGTGCTGCTTCTTCCCCACTCTCCCGTTCCCACTCTCAAGCAAAGCTTTTCCCCCTCACTCTTCTTCTT AACCTCCCACATATCCATTTCTCAAGCAAAGCTTCTTCCCCTCACTTTGCAGTTGTACAACCATAAGAATCATAAGGCAGAAATTACGAATTATGACAAT CCAATTACAAATAGGTAGGAGATTCAAGCAACTAAACTTTCTCATATATAAGTTTTACTTTGTATTGTAGGCGAAGTGCCACCTTCATGAAACCCATCAC TGTCTTTTTCACCCCTTGTGTATTGTTTTTGAACTGCCATAATGTCTTCATATTTTTGTTGTTGAAACTTGAATTGTTTAACAGGTAGCATTGGTAAAAC AGAGAGTTGGTGGATATATAGACTCTCAGTTGTTACTACAAGCTGGCACCCAATAATTAGGTGAAGGGTTTTATGTTATGAATTTGGTAAATTGAAAATG TAACAGTTTTTTATAGTATTAACAATCAAGGACCATGCACATCTTGTAATAATTTGTTAATAACTAAGGTTCTTCACTTTCTGTATAAGATTTAACATAT TCTGAGTTAGTATTTTGATGGTTCAATGATAGTGGAATATTGTTTACTCTGTAATGATTATAATTGTGACATTTTAAATGTTTTTATACAGTTGCTTTAG TGTGAGATTACATAAATTTGAAATGTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_47639; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_102648
Blastp | RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 34.41% of identity |
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Blastx | RNA-binding KH domain-containing protein PEPPER from Arabidopsis with 34.41% of identity |
Eggnog | mRNA transport(ENOG410XNN8) |
Kegg | Link to kegg annotations (AT4G26000) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434261.1) |
Pfam | KH domain (PF00013.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |