Ll_transcript_266939

Id TrinityFTRINITY_DN55818_c1_g3_i3
Name TranscriptLl_transcript_266939
SequenceTGAACATAGCCTAGTCTTATTTTACCATTATTTCCAACAGTGTGAGGAAGGAGTCATGAGAATTGAGCAGCATCATTTCCATATACTTGGTCATCATCTT CACCTTCTTCTTCTTCTTAGTGTAATTGAACTGCTTCAGTTTCTTTGACACTATAAATACTCATTCTCATTTCTGAGTCATAACAAGTCTTCATCATTTT CCCGCAGATATAGAAGAAAGTGTGTACACACGTCATTCCTTAACGTGCGCACCCCCTGCGTATTGAAATGGAGCCTCACACTTCATCATTTGTATCCAAA GCGAGAACCGCGCTTCATTCTGCGGCTGCGAAAGCGGAGCGTGTTCTCAATGACTTCAAATCCGATCGAGATTCTGATAAACAATCGAATGATGATTTTG GAGGGAAGCAGCGGCATGAATCTCCTCGGAATGAGAACGAGTCTAAGCTTCTCAGTGAATTGAAGCATATAAAGTGGAGACCACCGCATATAGGAATAAA GCAAGATTGGCAAGATAAATTTAACAATATTCGGAAAGGGAGAAAAGAAGTCGAAGATACAGATAAAATCCGAGACACAAACATGGCCGCTGTTCCATTT TACGATGAAAATTTGTACATCCTGAATATGAAATATGATGCTGATATCAAGGTAAGAACATCTTGATCTTTTTAAGTCAAGGGTTATGTCTTCCAATTGT GCATTGAAGTTTCTAAACCAGGCAGTTGTGTCAAGAAATTGGAAAATCTGATAATGTACTGTGTCACATTAATGACTCATAAAAAGGGAATCCTATTCAA TGCATGGCATGCTTGTGATGAGTTAGTAATGTATGCTAATTATTGATCTCATGGTTAACTAAGTGCCTGAAAACTCTTTTCAGTAAGTTGAACATATTGA TATTTGTTCATTTATTTTCTGACGCAATTATACAAATGGATAACATTAGTGATGGTTGATGAACAACTTGATTTAGGCTTCAGAAGCAATTCCCTCAGTT GAGGGCTTAATTGCCGCGACTAAAGACCCTATTCCTCCATCTTCTGTCATGAAGCAATTGGCTAAAGCTGTTGAGGCTGGAAGGAAAACAAATTCAATGA AAGATTTTGCAGCTTCAACTGAAGGTTCTTCACCTGCCAAAGATAGGGCAGGCTTAACTCTCTCTGCAATGAAGGCTTTAGTGTTGCGAGAAAAGGAGGA TAACCTTACCTCTGAGTTTAGTAGCAATGAGAAAGTTGGGCTCTTGATTAATTCTCTGTTTGATCCAGTTGGCGAGTTCCTCAAAAGGAAGGTAAACTCT TATCCAGATGAAGCTTGCATGACAGCTTTGCCAAGTGATATTCATGGTGCTCCTCCGGAAAGCTTGATTGTTAAGTTAGCTGAAGTCATTGGAAACTTCA AGACGCTTAGAAAAATGGGTCTTTTCTGGTGCAGGATTGTTGTCGAACTGCGAAAATTTTGGTCTGAAGAACAATATTTACCTGGAGTTCCCCCAGATGA CATTCCAGATCTGAAGTCATGTCTTCTATATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGTCATATTATTGCAACCGAATCTCTT GATTCTCTGATGATGGAAGCCAATTCAAATGTAGAAGAATCAGAAAACAATACCAAGAAAATTCCTGCAAACCATTTATTATATGCTAAATTAAGTACAG GGGAGCTTGTTCTTCGACTAGGTGCCGAGTGCCCATCTGGAGATATGACGTTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTGTCACTCAGGAAGGACC TCTGCTTACAGAAGATCTTATCAAAGAGACTGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGCGCTGGGTGCTCTCATCTCCTGTCTGATATGCAGGCT TTCAAGGCTGCAAATCCTGGTTGCATTTTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAGGCAGGTACTGTGGACAGTGATT TTTTTGATAGTAGTGAGTCGTTGTCCACCAGAGGTCAGCTAAGTCTGCGAATGCAAAAAGAAGGCAATTTGTGGCGCGAATTGTGGGAAACTTCTAAACC AGTACCAGCTGTTAAACAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCATTTGAGGACATTCGGCCTTCTGAGCTTTTTGAA CAGCTGTTTATTTCTTTACTTGGTGTAGGATTAGCAATTGCTGAACCTATGCTGTCTGGTGAAAGTGACTTCTCAAAGTTGTTCAATGACTGCAAGGATT ACGTAGTTACGACTTGTCAAAGCAACAAATTTAGTGAGAAAGTTGATGAGCTTGTTCAGGTGGGGGTACTAGAAGAAAATGGGGCTGATTTATGATTCTA CTCGGCATCTGAATTAGTCCTAGTATTGATTCTCTCAAGTAAATGTTCAAATTTTCACCAGTGCAGTGAACTCCAAAACTGCTTTATCCATCTAATTGAA CAGTCTTTAACTATATAAAGAGGAGCCTTGAGGAAAAAGGAACTCTTTGGGACTGGTCAAATATTGAGAAATTTGATACCATTTAACCAATCCTACTTTT TTATGTTTAGGTTCACTGACTGATAACTCGACCCGTACGAACATGGCAATGAAAAATAATTCCTCTGAAAATGTAGACTGACAATGATACTGGAAGCTGA TGATTTTTATCTTCCTATTCTAAATTACAGAACAATTGTCTAATGGTCACATGATCACATCTATGTGTAGGTATATGAAACAGTGGAGAAAATGTTACTG AAGCCTGAGGAAGTAATAAAGATGATGAAGAAAGCAGAAGAATCAAGTATGACTCCTGGTGAACCAAAGCGTCGGTTTAAGAGACTCCTCCTTATTTTTG GGGGTAAAGATAAAATGCTGACGAGTCCGGTCTCGAAGGATCAGACTAACGACGAAGAAAACCCGTTTCGACAATCCTTTTCCAGTTTCTTTGACAGCAA GTCATCTTTATTTTCGAAGAAGCCTCCTAAGCATGGAAGCCTTTCCCCTGCTGAGAATCCTCATTGTTTGGAAAGTGATTGGAAACTTGTCTAGACAGAG TTCAGCCTCACCCTATTTATGATAAGCAAACATGTTTTTTTGTTTTTTTGTCCCTAGCCAGATCACCGTAAATTATTTTTGTTTATTCCTTTTTAGTGAT CAACAAATTTTAATGCATTCTTAAATTACCTAAACTATTACTATTTTTTTATATTTTTTTGTATAGCATTGCTTCTTGGTGAGGGATTGTACAAGGATGA TTAGTCAAATGGTATAAAACTTCCCCGTTTCCTGCAAATGTCACGTTGCTTTTGAATATTTTCAAAGAATGCTGTTTTCCCCACTCACCCGTGTAATTCA TTTTTAAGCTCAATGTACACCATGAAATTGTAACAATTTGCTTTAGTCTTATAAAAAAGGGTTGGGCAAATATGTAGTGAAAGAATTTAGTTTTAAAACA TACCTCTTATGATGTTACTATTTCCTACTAGTACTTTGAGGTACGTTTGCGAGTTGGGTTTTAGAGGAAAATGAAAGACTTCAACGTCTTCTTTCAAATG TATTTCATAGCTCTCAATTTTTAATTTCTTTTCCTCTCTTAAATGCAACCCGAAAACATACCCTAAT BLAST
Tissueflowers
Gene nameLI_gene_54724; 
Additional informationdetails; 

Expression of Ll_transcript_266939

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_266939

BlastpRab3 GTPase-activating protein catalytic subunit from Rattus with 32.19% of identity
BlastxRab3 GTPase-activating protein catalytic subunit from Sophophora with 31.07% of identity
EggnogRAB3 GTPase activating protein subunit 1 (Catalytic)(ENOG410Y2R4)
Kegg-
CantataDBLink to cantataDB annotations (CNT0002243)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019440686.1)
PfamRab3 GTPase-activating protein catalytic subunit (PF13890.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;