| Id Trinity | FTRINITY_DN55874_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_267180 |
| Sequence | AAAATAGGTTGAAGAAGCCCACAACGTTTCTGTGTAAGATGAAATTCCGAAATGAACTTCCAGATCCAAGTGCACAACCCAAGCTAATGGCGTTCAAGAA AGAGAAAGACCAGTATGTAGTCTTATTCTCATGTTAATATTAGTATGTAGCTAGCAAGAATTATCTAGCCACTTGATGGGGTAGTCAGCAGTGTCATTGA TTTTATGATGTTATGCTATTGTTTTTCCCACTTATCGCTGCATTTTTTCATCATTTTGGTAACTGATAAATGTTCAGGTTGTAGGAAGATGAAGAGGAAA ACTGACACTTCGGTAGAGATCTGGTAACCATATAGTGGGTTAATATGATATTGTAGGCAGGAAGTGTAGTTCTGGTATTAGACGAGAATCATGAGATATG CTCTGCAAGTTATTCAATGTAGTACTATTCTGCGTGAGATAGAGCATATATGGAGTGAGATAAATGATTCTGATTAGCTTTTGCATGAAGTTTCGAGGCT TACGACCATTTGGTTGTTAAATGGCTACTTTAAAATGCTTCACCAGTTAGTCTTTCAATGTTGGCCGGTTATGCAGGATTCAGTGGTTAAGACTTATGAC ATGCTTTTCTTACTCCTCATATTAAAGACTGATTTTTATTGGGGAACAATATTTCAGGGATGCTTCCAAAATAAATAGTTTAACTTTGCTTCCCTTTGTC TTGCTTTTTCTCTCTCCTGATTTTATGGTCATTGTGCAGATATGCCAGATATACAATCACATCTCTAGAGAAAATGTACAAACCCAAACTTTTTATGGAG CCAGATCTTGGGATACCTCTTGACCTGCTCGATCTCAGTGTTTACAATCCTCCTAGTGTCAGACCACCTCTTGACCCAGAAGATGAAGAATTGTTACGAG ATGATGAAGTCATTACTCCTATTAAAAAAGATGGCATAAAAAGAAAAGAAAGGCCCACTGATAAAGGTGTTGCTTGGCTTGTCAAAACACAATATATATC TCCTCTGAGCATGGAATCGACAAAACAGTCTTTAACTGAAAAACAAGCAAAGGAACTGAGAGAGATGAAGGGAGGCTGCAACGTTTTGGGTAATCTGAAC AGCAGGGAAAGACAAATAAAGGAAATACAAGCATCATTTGAAGCAGCTAAATCACACCCTGTTCATGCAACTAAGAAAGATTTGTATCCTGTTGAGGTTC TGCCTCTGCTACCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCAGCATTCGATAATGCTCCTTCAGTTGATTCAGAAATGTACAGTAAGTTGGA CAAATCTGTTCGTGATGCCCATGAATCAAGGGCAATTATGAAAAGCTATGTTGCATCAGGCTCAGATCCTGCAAATGCTGAGAAATTTTTGGCATATATG GCTCCGGCACCTGGAGAGTTGGCAAAGGATATATATGATGAAACTGAAGATGTTTCCTACTCTTGGGTTCACGAGTATCACTGGGATGTACCGGGTGATG ATGCAGATGACCCTACAACATACTTAGTTCTGTTTGACGAGTCAGAGGCGCGCTATTTGCCTCTTCCAACAAAACTTGTTTTAAGAAAAAAGAGAGCGAA AGAGGGAAGATTTGGTGAGGAGGTTGAACAATTTCCGATACCTTCAAGACTTACCGTAAGGAGGAGATCAAATGTTGCCGCCATTGAGCTGAAGGATTCT GGGGCTTATAGCTATACAAAGGACTCTACTTCTTCAAAGAGAGGGGCTTTAGAAATTGATGATGATGATGATATGGATGAGACACATAGAATTGCACCAG AACAGGATAATTATGAGTCTAGTGGAGCAGAAGATGACATGTCTGAATGATTTTTTGATGCAAATACTGCTGCATTGGAACAAATTTTCCCTATGAAGTT ATGCTTGGATTGTTGATCAGATAGCTGAATTCCTAGGTCCTTCATTGAAGGAAAAGCAATGATAATGCCATATTATAAAAAATGTTCACAGTGAAAAGAA AAATATATATAAAAAGAGCAAAACCAACCTATAGGAATAATCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_55280; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267180
| Blastp | Protein PAF1 homolog from Arabidopsis with 68.25% of identity |
|---|---|
| Blastx | Protein PAF1 homolog from Arabidopsis with 68.19% of identity |
| Eggnog | paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)(ENOG410YZXE) |
| Kegg | Link to kegg annotations (AT1G79730) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436460.1) |
| Pfam | Paf1 (PF03985.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |