Ll_transcript_249671

Id TrinityFTRINITY_DN55944_c0_g2_i18
Name TranscriptLl_transcript_249671
SequenceGGATACCGAACCACGTGGAATCAAAAATTTCTTAGGTCAAATTTGAGGCGCCATGTATGGAATGATGACTATTAGCATCAATTTTCCTCTGACTCAGATA CCAAAAATGAAAACATGGATTACCAATTCAAAATCAAATAATAAAAAGTTTTGGCCGTCACACATATTCCACAACCATAAAGGTAAGCACCCAAACACGG TCCTAAACATTTCGCATTACCCTAATATAGGACTTTTCATTCCTTCGCCGCATGTTCCCCTTTCTTTCAATTTCTCACTCTATTTGAACTAATACCACTG TGCTGTGTTCTGCTCCTGATATAAACCCTATGGCGCTTCGTTTTGAGGTTCACCTTCCAATTATATTTCTACTCAGCCACATTGTCTCTTGTCTTTTTGT TATGCTTGAATATTTAACTGCTTCGCTGTTCTTTTTTGTTTTCTTTGAATAATTTAATTAATAGGAATCTGTTTATCAATTTTTGATTTTGTTCAAGTGA CAAGGGTTTTTGTTTCCCTAAGTGAGTGTTGTGAATGAAAAAATATACATTTTTATTATAAATTTAAATGGAGAGAGTTGTATATTTGTATGACTTTTTT TATATAAAAAAACACTTAATTTTGTAAAAATATATTCCTCCTTTTTTCATTCCAAAAAACCACTTCCTGCAATTTAATTTTTGGAGGGGAGTGAGAAAAT GTCTGAAATTTTGGATGATTCTATATACAATAGCTATGAAGCTCCCATACTGATACGAGTATGGGATATGATATGTGTCCAATATGTGTATACATATATT ATTGAAAATGCAGACATGTTTGAGATACACATATATGCACATTAAAAGTTTATAGAACTGATTAGTGCCCATAAATAAGAATAGCATTGATACCATTTAA TCCGTGATCAACGTTATGTAAATGCAACTTCTCTTCTTTCTCTGTACAAATATACATGCTTTGTCTTTTTTCTCTCACTACAAGTCCACTTTTGTACATT GAACGTTATTTTCCCTTCTACTTAATTGATTATGTTTTATGTTTTTTTCCTCTTTCCCCCTCTTAAGATACGTACCAGAGAGTATATGAAAAGTATTGGA TTTATGATTTATTTAATTTTGAAAAAAATAATTTCGATACACTATGGATACGTATCAATGAAGAAGCAGAGAGATACATGAAAGATTGAAGTATCAATGT TTTCATGATGCAATAGAATAAGAGATAGACATGTGATTGCTGAAAAGCATTGTGTGCGCATGATCTTTTGGCATTTTTTATTTATTTCATAACTGTATTT CAGTTATTCTTTGAACTCCACTCTGTTCCCGTTGTCAGGTTCTTGCCAGGTTCAACCGAGCTCGTGCAGCTCGATTGACACTCCCTCACTTTGTGTGTGA AACGCCTTTATTTATGCCAGTAGGCACACAAGGGACTATAAAAGGATTGACTAATAGCCAGCTTGAGGATATTGGCTGCCAAATAATTCTTGGAAATACT TATCACTTGGCCCTTCGACCTACTTCGGAGCTTCTTGCGGAAGCTGGCGGTCTTCACAAATTTATGAACTGGCGGAGGGCAATGCTTACAGACTCTGGTG GCTTTCAAATGGTCTCACTGTTACATCTTGCTGATATCACAGAAAAAGGTGTGACATTTCAGTCACCAGTGGATGGAAAGCCAATGCTTTTAACACCCGA GGAATCAATTCAGATCCAAAATAGAATTGGGGCAGATATCATTATGGCTCTTGATGATGTTGTAAAGACCACCATCACTGGTCCAAGAATTGAGGAAGCT ATGTATCGAACACTTAGATGGATTGACAGATGTATAGAAGGTAAGTCTGTTAGTGAGGGGTAACATTCAAGTCTCTGGTGATGTTCAATGCATGTAAATA ACTATTGGTTGTAGTGAATCTTTGACTGTCTGAATAACTTGTTTATCTTGTATTATCCAAATACTTAATACACTGGATAGTGGATAGTGGAAAATTGTTT TATCATTGTAACTTACCTCAATCAGGTAGCCCTCTTGTATAGTATTTAGGTTATAGCAACAGATGTTAAATGAGTGATACATTGTGCTGAAGAACATACC CGTAGACCTTTCCCCATTCTATTCCTTTATTTTTATCTATCTATCAAATACTTATTAAATTTATTGCAACTGCGTACTGGAAAGAAACTGCTTATTTTGT TCATCAACATATTCCCTGGAATCCTTTTCTATGCATGCCAAATTGTGATTTAAACTAGACTTGGTTATGTTTTTCAAACGAAGAAAAAGTCTATTGACTT GTGCTGAAAATCACTGAAATGCTCTTTGCAAAGTCGGTTCCAATAAATTATGATGTTGCAAATATTATATGCACAGCTTTGAAATGGAATCTAAATTTGT GGTTTTCATTTTTTTTGCAGTGGCTTTTGAGTTGTGTACCATACTACCACCTGTTAAATGAGCAGTTATTTATGAGAATGTAAAACCCAGTCTTATTGTA GTTATACATTTTTTCCTAATATTAATTAGTAAACATTCCTGTTCATTATTCTATTTCTGGAAGAAGAGGGAACTGTGGCAAGCCATTGCTGAGTTTCTTT TAGCCAGTTGCTAGTACATTCACTTTCTGTAAAAAAGAAAAGGAAAAAATTGAAACAAAAAATAAGCGTGGGAAAATAGTTCCTTTTCTCCATGAGGGGC ATTGGGAGTGAGTAGCATGAAGAAGTGATTGGAAATTTACTCATGTACCCCTTTGGGTAAAAAGTCCTTTTATGGGTGGTGCATTATGTTTTTCTCTCAG TATATTAAATTACCATCATTTATCATCTTTAAAAGGCTTTGTTATTAGTTTTAGCATGGATACATGATAGAGTTGACATGTCATTTATGTACATAAACTA TTATGTTTTATGTTCCTGAGCTGAATGCAGTATTTTTCCTTGGCTACTTGAATCACATATTACTTTTCTATTATCTTGCTGAATATAATATGCATATCAC CTTCTTTTAACAGCTCATGGGAGGCCTCATGATCAGAACTTGTTTGGTATTGTACAGGGTGGTTTGGATCCCGTGTTGAGGGACATTTGTATCAAAGGCT TGGTGGATCGCAATTTGCCTGGCTATGCTATTGGTGGTCTTGCAGGTGGCGAAGATAAGGATTCATTTTGGCGTGTTGTAGCTCAGTG BLAST
Tissueflowers
Gene nameLI_gene_55900; 
Additional informationdetails; 

Expression of Ll_transcript_249671

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_249671

BlastpQueuine tRNA-ribosyltransferase catalytic subunit 1 from Danio with 66.43% of identity
BlastxQueuine tRNA-ribosyltransferase catalytic subunit 1 from Danio with 65.61% of identity
EggnogExchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (By similarity)(COG0343)
KeggLink to kegg annotations (393985)
CantataDBLink to cantataDB annotations (CNT0000446)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019416068.1)
PfamQueuine tRNA-ribosyltransferase (PF01702.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;