Ll_transcript_168559

Id TrinityFTRINITY_DN57365_c0_g1_i10
Name TranscriptLl_transcript_168559
SequenceATCGATTGAATGTATATAAGCTCAACCCAAACTTAATTTTTAACTAGAGAACCCAAAAATCTGAAGGAAGAAGAAAGAAAGAAGAAAAGAAGAGTGAGAA AGTGAATAAAAACCTTAAAACATTTTATTATTATATATATAAATTCTTTGTTACTGCAATTTCCTCTTCCCCCACGCAACAAATAACACCAAAACAAAAC CAAAGCCCTCGTCTTTTCTTCTTTCTCATCTCCATTTTATTCGATCAATTTCACAACTTCTCTTATCTCTTCGAATCTCTCACTTTTCCCCAAATTCTCT TTCTGGGTATTCACCAATTCCACGTTTTTTTGATTTATTTCTTGTCTTCTTCGTAATCATAGAACCTTGGCACAACCATTTATGTCATTTGGGGCATGGA CAGGCTATTTATTCCCCTGCCAGTGTCTTTGAACAATGTTTAGCAGACCAAGAGATCCAAGTGCTTTCAGTATTTTCAAATGGAAACGTCAAGATGAATC ATCAGTGACAACAGGTTTACTTCAGGATGTTCTGCCCGAGATTGAGTTGTCTGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGTCCTTCAGGGCTT CTTAATGGTGAAAGCCTAAATGCAGAACCGATTCCTGACTTGGATCTATTCTTTGAAAGGCTTTACAGCTACTACTGTGAGAAAGGACTTTGGTGCATCA TTATAAAGTGGATTGTTGAACTTTTGAGTCTAGGGTTCACGATATGTTTTTCAGGATTCTTTTTACTGTATGTTGATTGGAATGGCCTTCGTAATGCAAA GTGTGGGATGAATGCAGTTGAGTCAGGAATTAAGCCTTGTGATCTTGCTAAAGAAGCTCTTCATCAATACCCGTTGACCCCGTTAACACTTAACAAATCT ATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGCTTCTTGAGGTTCTTTGCTCAACTAAAGTATACTCTGGAAATCCGACAGTTTT ACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACCATGCCCTGGGCTACAGTTATTGAAAAAGTTGTTCGGGTGCAAAACTCACAACAACTATG TGTGGTAAAGGATCTTTCTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGATCAACAAGGGTGTGCTTGCGTTCCCC ATTTCTCAGTGGGTCCCAGGTTCTGGTCCTACAGTGAAATCTGGTCCTAATGGAACACAATATCGCCTAATACTAACCAAGACCCTTGAGTGGACTTTGA ATTGGTGCATCCTGCAAAGCATGTTTGATCGGTATCCCTGATCTTGTCTTGTGTGTCTACTCATCCACTGCGACATCCTCATATGCTCTTTACTGCCCAA CCGAAAATTCCATAAAGCATTGCTGGTTTTATTCCATTTAATAGTTTTTAATCTTATATTTTTTTTTATTTGAATGCATGTATGTGGTGGTTTATTTAGT TAAATTGTATGATATTGTTCATTATACTATACTGTTTCAATGATGGGTTTCTTCTTTGAACACACTTTCTTCGCAGAAACTTCTGTGTCAGAATGGATTT TGTATCAAATCCAAGGACATTGAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTCTCTCCATTTATAGTCATATTCATGCTGGTATATCTC TTTCTGAGGCATGCTGAACAGTTTTATAATCACCCAAGCACAGCATCCTCTCGAAGATGGTCAAATTTGTCAAGGTGGATCTTTAGGGAGTTCAACGAGG TGGACCATCTCTTCAAGCATCGGATTAATAGCAGTGAATTACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCACTGCAAAATT CATCTCCTTCATGTCGGGTGGTTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTGCTAGAGGGTCACATATTTGGTCGGAACCTGCTG TGGTATGCTGCTGTTTTTGGAACTATAACAGCAATTAGCCGGGCTGCTATCACAGATGAGATTCTCGTGTTAGACCCTGAAAGAGCAATGTCTATGGTAG TTCAGCATACACATTATATGCCAAAGAGATGGCGTGGAAAAGAAAGTACTGTAAATGTCCGAATGGAGTTTGAAACCTTATTCCAATATACTGGGATGAT GTTACTTGAGGAGATGTCATCAATTTTCCTTACTCCATACTTACTTCTATTTGTTGTCCCGAAGCGGGTTGAAGATATCTTGCAGTTCATTGCAGATTTT ACTGTGAATGTTGAAGGTGTAGGTCATATTTGCAGCTTTAGCAACTTTGATTTTCAAGAGCATGGAAACAGTAATTATGGCTCCCCGCACAATGCTCCTC ACAGCCGGAGGAGTTCCTGGGGGAAGTTTGAGAAGTCGTTTTTGAGCTTTCAGAGCAGTTATCCTTCATGGGAATCAAATGCTCAAGGTAAACAATTTTT GCAAAATCTGAGAACCTTCAGAGAGCAAAAGTTACCGGGACATGTAAACAGATATTCATATTCCCCTCCTAGGATGTGGAAAGGTAGTCCCAATATGGAA AGCAATGAAGACAGAAAAAGGTTTATATCTCGGGAAATGTCACATCATACTTTCGAAACTGGCAATCACTTGGGTTCCTTGTGGCTAATTGAAGCCAATC AAAACAATCACCCCTATCTTCTCGATTGGTACTATACTTCCCGATCTCACGATGTGACTTCCAGAGAGGTTCCAATTCCGAATGATCCATTTGATGTTAA TGATTGTCATTCTGGAGTTTGGATGCGCTCAAACTTGACAGAGAATGAACCTGGGTATGATGAATACTTGAACGAGTATCATGATGATAATCGAGCTGCT TCTTATCTCGGAGCTTCCATATCAGCTCCCATCTTCAGGGAAAGTTTAATTCAGGATCAAAGTTCCAATGATCAGCCCCACACTACCAGGAGCCATTGGT GGGCTAGAAGTCACCACCAGGATGAACCGGGTCAAACAAGCTTCTTCGAGCCTCCAGATTTCAATCAGCAAACAACAGCATATAATAACTACTATGATAA ATTTTCTGATAGAGGAGGCTCAGAGGGTCATCATGATCAGGAACAATTGTATAGGAGAGATGAGCACGATTTATCTAGAACAGCATTCACAAATGACTTA GAAGCTGGAGAATTCTATCTTCATTTTGATGATATTTATAGCAGCAGGCCTCCACAAAATCCCACTGTAAATTCAAGCACTACAAGCTTTTGAATGATGC CTTTGTCCTACATAATTGCAAGAGTTTCATAGTGATGATTGCCCCTTCTATTCCATGGAAAGGGGAATTTGATTCTTTGTTGTAAATAGACTCATTGACT GTGATTAGATTGTTGATGAGCCTCAGTTTGTTGTTTAAGAACCAAATGTTTCTTCTGCTAAAAATCATTCATGGCATGCAGTTTTCTAATTCTTAAA BLAST
Tissueflowers
Gene nameLI_gene_68094; 
Additional informationdetails; 

Expression of Ll_transcript_168559

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_168559

BlastpAutophagy-related protein 9 from Arabidopsis with 60.17% of identity
BlastxAutophagy-related protein 9 from Arabidopsis with 60.24% of identity
EggnogInvolved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Cycles between the PAS and the cytoplasmic vesicle pool and may participate in supplying membrane for the growing autophagosome(ENOG410XQBE)
KeggLink to kegg annotations (AT2G31260)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434383.1)
PfamAutophagy protein Apg9 (PF04109.15)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;