Ll_transcript_168549

Id TrinityFTRINITY_DN57365_c0_g1_i3
Name TranscriptLl_transcript_168549
SequenceATCGATTGAATGTATATAAGCTCAACCCAAACTTAATTTTTAACTAGAGAACCCAAAAATCTGAAGGAAGAAGAAAGAAAGAAGAAAAGAAGAGTGAGAA AGTGAATAAAAACCTTAAAACATTTTATTATTATATATATAAATTCTTTGTTACTGCAATTTCCTCTTCCCCCACGCAACAAATAACACCAAAACAAAAC CAAAGCCCTCGTCTTTTCTTCTTTCTCATCTCCATTTTATTCGATCAATTTCACAACTTCTCTTATCTCTTCGAATCTCTCACTTTTCCCCAAATTCTCT TTCTGGAACCTTGGCACAACCATTTATGTCATTTGGGGCATGGACAGGCTATTTATTCCCCTGCCAGTGTCTTTGAACAATGTTTAGCAGACCAAGAGAT CCAAGTGCTTTCAGTATTTTCAAATGGAAACGTCAAGATGAATCATCAGTGACAACAGGTTTACTTCAGGATGTTCTGCCCGAGATTGAGTTGTCTGATT ATAGAAGGATCCCAAGTCCAGGTAGTGAGAGTCCTTCAGGGCTTCTTAATGGTGAAAGCCTAAATGCAGAACCGATTCCTGACTTGGATCTATTCTTTGA AAGGCTTTACAGCTACTACTGTGAGAAAGGACTTTGGTGCATCATTATAAAGTGGATTGTTGAACTTTTGAGTCTAGGGTTCACGATATGTTTTTCAGGA TTCTTTTTACTGTATGTTGATTGGAATGGCCTTCGTAATGCAAAGTGTGGGATGAATGCAGTTGAGTCAGGAATTAAGCCTTGTGATCTTGCTAAAGAAG CTCTTCATCAATACCCGTTGACCCCGTTAACACTTAACAAATCTATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGCTTCTTGAG GTTCTTTGCTCAACTAAAGTATACTCTGGAAATCCGACAGTTTTACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACCATGCCCTGGGCTACA GTTATTGAAAAAGTTGTTCGGGTGCAAAACTCACAACAACTATGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGA ACTACTTGATTGGAATGATCAACAAGGGTGTGCTTGCGTTCCCCATTTCTCAGTGGGTCCCAGGTTCTGGTCCTACAGTGAAATCTGGTCCTAATGGAAC ACAATATCGCCTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTT GTATCAAATCCAAGGACATTAAAGAAAAGGCTTATGATAGTTGGGCTTGCTATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCT TTCTGACACATGCTGAACAGTTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAACTTGTCAAGGTGGATCTTTAGGGAGTTCAACGAGGT GGACCATCTCTTCAAACATCGGATTAATAGCAGTGTATTATATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTC ATCTCCTTTGTATCGGGTGGGTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTGCTAGAGGGTCATATATTTGGTCGGAACTTGTTGT GGTATGCTGCTGTTTTTGGAACTATAACCGCGATTAGCCGGGCTGTAATCAAAGATGAGCTTCTGGTGTTAGACCCCGAAGGAGCAATGTCTATGGTAGT TCAGCATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGCAAATGTTCGAATTGAATTTGAAACCTTATTCCAGTACACAGGGATGATG TTACTTGAGGAAATGGCATCAATTTTCCTCACTCCATACTTACTTCTGTTTGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTCATTGCAGATTTTA CTGTGAATGTTGAAGGTGTAGGTCATGTTTGCAGCTTTAGCAGCTTTGATTTTCAAGAGCATGGAAACAGCTATTATGGTTCCCCATTCAATGCTCCTTA CAACCGAAGGAGTTCCCAGGGGAAGTTAGAGAAATCGTTTTTGAGCTTTCAGAGTAGTTATCCTACATGGCAGTCAAATGCTCGGGCGAAGCAATTCTTG CTAAATCTGAGAACCTTCAGAGAGCAAAAGCTACCGGGATATGTAAACAGATATGCATATTCCCCATCTAGAATATGGAGAGGTAGTCCCAACATGGGAA ACAATGGAGACAGAAACAGGTTCACATCTAGGGAAATGCCGCATGGTACTTTTGAAACTGGCAATGACTTGGATTCATTGTGGCTAATTGAAGCCAGTCA AAACAATCATCCCTATATTCTTGATTGGTATTATACCTCCCGACCTCATGATTTGACTCTCGGAGAGGTTCCAATTCCAAATGACCCATTTGATGTTACT GAGCATTATCCCAGAGATTGGATGCCCTCAAACTTGATGAAAAATGAACCTGGGTATGCTGAATACTTAAACGAGTATCGCGATGACCGAGCTGCTTCTC ATCTTGGGGCTTCCACATCAGCTCCCATCTTCAGGGAAAGCCTTATGGAGGATCACAATTCCAATGATCTACCCCACTCTATCAAGAGCCATTGGTGGGC AAGAAGTCCCCACCAGCAGGACGTGCCGGGTCAGACAAGCTTCTTTGAGCCTCCAGATTTTCATCAGCAAACAACAGCATATAATAATAATTATGATAAA TTTTCTGATAGAGATTCTGATAGAGGGTCAGAGGGTAATCATGATCAAGAACAACACTTGTACTGGAGAGATCGACACGATTTATCTAGAACAGCATACA CAGATGATTTAGAGTCAGGAGAAATCAATCTTCACTTTGATGATATTTATAGCAGCAGACCTCCAGAAAATCCCACTCTATATTCAAGCACTGCAAGCTT TTGAGTGATGGCCCTGTCATTCATTATTTGTTTGGTAGGTTCTTGCTTTCAAGGATCTGGAAGAGTTTCCAAGTGATGATTGCCCCTTCTATATTACTTG CATGGAAACTCGAAATCCGATTTTTTGTTGTATATAAATTCATTGACTTTGATTAGATTGTTAATGATCCTCAGTTTGATGTTTGGAAAGGCCTGACCTT GGGCTGTGTAGAATGGTTGGTTTAAGAACCATTTTTTCTACAATAAATCATTCATTGCATAGTGTTCTAATTCTTCACATCCTTTTTGTAACTGATTTAT TGCAACTTTTCAATGCAAATTTCACGAAATGACTTGAAGTTTTCATTGCCAATCATATGGGACTGGAAACTACAGGCGAGG BLAST
Tissueflowers
Gene nameLI_gene_68094; 
Additional informationdetails; 

Expression of Ll_transcript_168549

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_168549

BlastpAutophagy-related protein 9 from Arabidopsis with 66.52% of identity
BlastxAutophagy-related protein 9 from Arabidopsis with 66.52% of identity
EggnogInvolved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Cycles between the PAS and the cytoplasmic vesicle pool and may participate in supplying membrane for the growing autophagosome(ENOG410XQBE)
KeggLink to kegg annotations (AT2G31260)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019433827.1)
PfamAutophagy protein Apg9 (PF04109.15)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;