Ll_transcript_168556

Id TrinityFTRINITY_DN57365_c0_g1_i8
Name TranscriptLl_transcript_168556
SequenceATCGATTGAATGTATATAAGCTCAACCCAAACTTAATTTTTAACTAGAGAACCCAAAAATCTGAAGGAAGAAGAAAGAAAGAAGAAAAGAAGAGTGAGAA AGTGAATAAAAACCTTAAAACATTTTATTATTATATATATAAATTCTTTGTTACTGCAATTTCCTCTTCCCCCACGCAACAAATAACACCAAAACAAAAC CAAAGCCCTCGTCTTTTCTTCTTTCTCATCTCCATTTTATTCGATCAATTTCACAACTTCTCTTATCTCTTCGAATCTCTCACTTTTCCCCAAATTCTCT TTCTGGGTATTCACCAATTCCACGTTTTTTTGATTTATTTCTTGTCTTCTTCGTAATCATAGAACCTTGGCACAACCATTTATGTCATTTGGGGCATGGA CAGGCTATTTATTCCCCTGCCAGTGTCTTTGAACAATGTTTAGCAGACCAAGAGATCCAAGTGCTTTCAGTATTTTCAAATGGAAACGTCAAGATGAATC ATCAGTGACAACAGGTTTACTTCAGGATGTTCTGCCCGAGATTGAGTTGTCTGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGTCCTTCAGGGCTT CTTAATGGTGAAAGCCTAAATGCAGAACCGATTCCTGACTTGGATCTATTCTTTGAAAGGCTTTACAGCTACTACTGTGAGAAAGGACTTTGGTGCATCA TTATAAAGTGGATTGTTGAACTTTTGAGTCTAGGGTTCACGATATGTTTTTCAGGATTCTTTTTACTGTATGTTGATTGGAATGGCCTTCGTAATGCAAA GTGTGGGATGAATGCAGTTGAGTCAGGAATTAAGCCTTGTGATCTTGCTAAAGAAGCTCTTCATCAATACCCGTTGACCCCGTTAACACTTAACAAATCT ATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGCTTCTTGAGGTTCTTTGCTCAACTAAAGTATACTCTGGAAATCCGACAGTTTT ACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACCATGCCCTGGGCTACAGTTATTGAAAAAGTTGTTCGGGTGCAAAACTCACAACAACTATG TGTGGTAAAGGATCTTTCTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGATCAACAAGGGTGTGCTTGCGTTCCCC ATTTCTCAGTGGGTCCCAGGTTCTGGTCCTACAGTGAAATCTGGTCCTAATGGAACACAATATCGCCTAATACTAACCAAGACCCTTGAGTGGACTTTGA ATTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTATCAAATCCAAGGACATTAAAGAAAAGGCTTATGATAGTTGG GCTTGCTATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGACACATGCTGAACAGTTTTATAATCACCCAAGCACAGCA TCATCTCGAAGATGGTCAAACTTGTCAAGGTGGATCTTTAGGGAGTTCAACGAGGTGGACCATCTCTTCAAACATCGGATTAATAGCAGTGTATTATATG CTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCTCCTTTGTATCGGGTGGGTTTGCTGCAGTTCTGATCATCAT TGCTTTTCTTGAGGAGTCTCTGCTAGAGGGTCATATATTTGGTCGGAACTTGTTGTGGTATGCTGCTGTTTTTGGAACTATAACCGCGATTAGCCGGGCT GTAATCAAAGATGAGCTTCTGGTGTTAGACCCCGAAGGAGCAATGTCTATGGTAGTTCAGCATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAA GTACTGCAAATGTTCGAATTGAATTTGAAACCTTATTCCAGGTACTATCAGCAGCTTTATCTCCGATACATTTATGTTAAGCTAGACCCACCTCTACATG CTATTTTTTGTCTACATGATATAATAGATTTGGCTTATAACAAAAATATAATAGGTTTAAACTATGAATACTACTTATGGTTCTATGTTTTTAATGGTGC AGTACACAGGGATGATGTTACTTGAGGAAATGGCATCAATTTTCCTCACTCCATACTTACTTCTGTTTGTTGTCCCAAAGGTCATTGCCATATCTGGGCA TAACTTTGTCTTATATGCCATATGGTGTTCTTTCATTTGTATGGTATAATGTATTAACTATATGTACTTTTCAATTTGCAGCGGGTTGATGATATCTTGC AGTTCATTGCAGATTTTACTGTGAATGTTGAAGGTGTAGGTCATGTTTGCAGCTTTAGCAGCTTTGATTTTCAAGAGCATGGAAACAGCTATTATGGTTC CCCATTCAATGCTCCTTACAACCGAAGGAGTTCCCAGGGGAAGTTAGAGAAATCGTTTTTGAGCTTTCAGAGTAGTTATCCTACATGGCAGTCAAATGCT CGGGCGAAGCAATTCTTGCTAAATCTGAGAACCTTCAGAGAGCAAAAGCTACCGGGATATGTAAACAGATATGCATATTCCCCATCTAGAATATGGAGAG GTAGTCCCAACATGGGAAACAATGGAGACAGAAACAGGTTCACATCTAGGGAAATGCCGCATGGTACTTTTGAAACTGGCAATGACTTGGATTCATTGTG GCTAATTGAAGCCAGTCAAAACAATCATCCCTATATTCTTGATTGGTATTATACCTCCCGACCTCATGATTTGACTCTCGGAGAGGTTCCAATTCCAAAT GACCCATTTGATGTTACTGAGCATTATCCCAGAGATTGGATGCCCTCAAACTTGATGAAAAATGAACCTGGGTATGCTGAATACTTAAACGAGTATCGCG ATGACCGAGCTGCTTCTCATCTTGGGGCTTCCACATCAGCTCCCATCTTCAGGGAAAGCCTTATGGAGGATCACAATTCCAATGATCTACCCCACTCTAT CAAGAGCCATTGGTGGGCAAGAAGTCCCCACCAGCAGGACGTGCCGGGTCAGACAAGCTTCTTTGAGCCTCCAGATTTTCATCAGCAAACAACAGCATAT AATAATAATTATGATAAATTTTCTGATAGAGATTCTGATAGAGGGTCAGAGGGTAATCATGATCAAGAACAACACTTGTACTGGAGAGATCGACACGATT TATCTAGAACAGCATACACAGATGATTTAGAGTCAGGAGAAATCAATCTTCACTTTGATGATATTTATAGCAGCAGACCTCCAGAAAATCCCACTCTATA TTCAAGCACTGCAAGCTTTTGAGTGATGGCCCTGTCATTCATTATTTGTTTGGTAGGTTCTTGCTTTCAAGGATCTGGAAGAGTTTCCAAGTGATGATTG CCCCTTCTATATTACTTGCATGGAAACTCGAAATCCGATTTTTTGTTGTATATAAATTCATTGACTTTGATTAGATTGTTAATGATCCTCAGTTTGATGT TTGGAAAGGCCTGACCTTGGGCTGTGTAGAATGGTTGGTTTAAGAACCATTTTTTCTACAATAAATCATTCATTGCATAGTGTTCTAATTCTTCACATCC TTTTTGTAACTGATTTATTGCAACTTTTCAATGCAAATTTCACGAAATGACTTGAAGTTTTCATTGCCAATCATATGGGACTGGAAACTACAGGCGAGG BLAST
Tissueflowers
Gene nameLI_gene_68094; 
Additional informationdetails; 

Expression of Ll_transcript_168556

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_168556

BlastpAutophagy-related protein 9 from Arabidopsis with 80.91% of identity
BlastxAutophagy-related protein 9 from Arabidopsis with 80.91% of identity
EggnogInvolved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Cycles between the PAS and the cytoplasmic vesicle pool and may participate in supplying membrane for the growing autophagosome(ENOG410XQBE)
KeggLink to kegg annotations (AT2G31260)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019433827.1)
PfamAutophagy protein Apg9 (PF04109.15)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;