| Id Trinity | FTRINITY_DN57999_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_258368 |
| Sequence | CTCCTTTTAATGGTTATAATTATTGAAGAAACCTAGTTTTTCCAATAAGTTCCAATAGCTACTTACTAAAACCCCTTCTTCAGCTTTTGGTGGAGGGAGA AGAGAAGAGAAACATGGCGAACGAAGATCGGAGCAATTGGAGTGATCTTCTACACTCTTCCACGAAGCTTCTAGAACAAGCTGCTCCTTCCGCTCAGTTC CCTCCACTTCAGAGGAACTTAGATCAACTTGAAGCGTTGTCTAAGAAGCTCAAATCCAAGACCTTAAGGGCAGAGGCGCCTTCTCAATCTATTGCTGCTA CAAGGCTCCTTGCCCGTGAGGGGATAAATGCAGAGCAGCTTGCAAGGGATCTGAAGTCATTTGAATTGAAGACCACATTTGAGGATGTTTTTCCTGTTGA GGCAACAAGTGTTGAAGAGTATCTGCAGCAGGTTCATGAAATGGCAATGGTCTCTTCTGTCCAGGAAGCTCAGAAAGATAATCTCAGTAGTTTTAATGAT TACATGATGAAAGTTTTTGAGGAGGATTGGCAAAAAGAAAAGCGTGATTTCCTTCAGAGTTTAAACCGAATTTCATCATTACCTAGGACAAACATGACTG TCACCAGCAGTGCTGGTACCCGCCCGGGCCAGATTGTGCCTACAGCTTCTAGTCCACAAGTCTCTTATGGTATGGAGGTTGTTCCTCTTACTAGTAGACC GATTATGGAGAAGAAGGCATCCGTCTATGCTGAAGTAGTGAAAAACCTGAATAAATCAAGGGAGTGTGGGTTACCATTCAAACCTGCGGCATCTTTCAAG GGCGCATATGAAAGTTTGGGCATTGATGCTGGTGGTGGAAAATCAGTTACCATGCGGAAGATATGGCACCTTGTCCAGGTTGTACATAGCTGTATGCTGT TAACAGACAAAACAGAAAGATAAACTTCTCTGTGCAACTTTCTTGGTGCCCCTTGTGTCAAAGTATTATTTTCCATAACTTGGCTCCTTGAAACAGATGA TGATGGATGGAGACTCAATTCAGCAACATGTTTCAAAAAGGATGTCGTTGACTATTGGTGCAAGACGCCACCTTGAGTTGGGACACGAGAAATACATCAT GGACACCATACACAGTCATCCTGCACAAGCTGCTCTTGGAGGCAGTGTTGGGAATTTGCAAAGAGTCCATGCCTTCCTTCGGATTCGCTTGAGGGATTAT GGATTACTGGATTTTGATGCTGGTGATGCTCGGCGGCAGCCTCCTGTTGATACCACATGGCAGCAGATCTATTTTTGCTTGAGGTCTGGGTATTATGATG AAGCAAGGAATGTTTCCCTATCTTCACGTGCTTCACATCAATTTTCTCCTTTGCTTACGGAGTGGATTAATACTGGGGGAGTGGTACCAGAAGAGATTGC ATCTGCTGCATCAGAGGAATGTGAAAGAATGTTGAGAACTGGTGATCGGGTTGGTCGAGCTGCATATGACAAGAAAAAGTTACTTCTGTATGCTATCATA TCAGGTTCTCGAAGACATATTGATCGCTTGCTTAGAGATCAACCAACTCTCTTTAGTACAATAGAGGATTTCTTGTGGTTCCAATTGTCAGCTGTACGTG ACTGCCCTAGTGGACCTTCATCTATTGTTCTAAGTGATGGTCTGGTTCCATACAGTTTGGATGATTTGCAAATTTACCTCAATAAATTTGAACCATCATA CTATACAAAAAATGGAAAAGACCCTCTGGTATATCCCTACATCTTGCTTTTAAGCATTCAATTGCTGCCAGCTGTATTATACATGTCTAAGGAAACAGGT GATGAAGGATATAACATTGATGCTGTCCACCTATCCATTGTGCTAGCTGATCATGGGTTCCTCTCTGAAGGTGCTGGGCATAAGTTAGGAGTGATGGATG TTTATGCGGAAGTGTCTACCATTATTAGGCAGTATGGGTCCATGTATTTGCGTCTTTGTGATCTCCAAATGGCATTAGAATATTACGCTCAAGCTGCTGC TGCAGTGGGTGGTGGACAGTTGTCATGGACTAGTAGAGGTAATGTTGATCAGCAAAGGCAGAGAAATTCGATGCTGAAGCAGCTTCTAACTGAACTTTTG TTAAGGGATGGAGGCATATATCTTTTACTTGGTGCAAGAGGTTCTGGAGAAGAAGGTGAATTGGGTCGTTTTGTGACTGATCCAAAAGCGAGGCAACAAT TTTTAATTGAAGCTGCTTTCCAATGTCAGGAGGCTGGGATGTATGATAAATCTATTGAAATTCATAAGAGAGTGGGATCCTTTTCCGTGGCCCTGGATAC CATCAACAAGTGCATCTCTGAAGCTATTTCTGCCCTTTTTCGTGGAAGATCAGATGGTGAAAGTCGGACTGCTGGCCTCATCCATTCTGGGAATGATATT TTGGAGACGTACACTTATTACCCTGATGTCAGGTCATATTGAAACTCTTACCTTATTTTTTGACTCATTCATGGTTATGCTTGAGGGTGAGATTGACCCA ACGATAAGGTTGCTGCTTAGTGACAATGAACTTACAAGTTCAAATCCTAGAAACTACCTATTCACTTGTAGGGGAAGGGTGCATACATCTATCATCCCTA GACCGTACTAAGTGGAAGTCTCATGCACTGGGCTGCCCTTTTTATACATGGTTATGTTTGGGTTTGAGATAGTGGTATTCTTAAATTGTTGCCTAACCTT TTATATAAGGTGTTTTTCAAATAATAATTTAATGAATCCTAGAGGCCTCTTTAGAACTTGTTCTGTGGTGATTTTACCCAGAATATGAATTGGTCCTCAC TCAATTTTTTCCTTACACGTCTTTTAACATGGAGTAACCTTAAAGATGAAAAGTCGGCCTCTGTATCTGGGAAGTCTATCTTTCCTATATACTTCACGAC TCACAAGGTCAATAAAATACTAGTGATGATTTCCTTGTAAAACAGTTGCTGAAGGGGATAATATAGTCTGGTGATTTGGGATGTACCACTGGAAGGATTT GGTCATCTTCGTTTGGTTGGTTACGCGGGTGTAGTCACAATTGAGTGGTATAGAGGTTTTAGTTTTGTTTTCTTTCTTGTACCCAGAAAAAAAATTCAAA AGTTTAAAAATAATACCTACGCAATATTTAAATTTTATAAAATTTCATGGCTTATGTCTATATTTGGTTTTCATTCATTTGCAACTATATATTGAGTGTG GATATTTCCTTAAGGAGTGGTTTGTTCATTGCCAATTCATGAGGCCTTCCTTGTGCCAAGTTCTTATAAAGAATGATTTTGGAAATTCCAGACTGCCTTA CTAGTTACTGTTGCTTGAGTTACTGTAACTCTCAGAATAACTTGTCTTCAAGAGAGACAGCTTGTCTTTGAGCAGCAAAATGTGTTAAGACAACTTGAGT CAGTATTGTCAATTCACAAATTGGCAAGACTAGGGAATTATGTGGATGCAATAAGGGAGGTTGCTAAACTTCAATTTCTTCCGTTAGATCCCCGAGGCCC TGACATTGCTATCAACGTGTTTGAAAATTTATCTCCTCATCTAGAAGCTTGTATTCCAGATCTGTTGAAGGTTGCACTCACTTGTCTGGACAATGTGACA GATTCCGATGGATCACTTCGTGCTTTTCGGGCCAAGATTTCTAGTTTCATTGCAAACAATTTGAAGAGGAACTGGCCTCGTGATTTATACGAAAGAGTTG CACAGAGGTTGTGAAAGTATAAATATACGATGGGAATTGTTGTAGTATTTAAATTCTTGAGGACAACAGTAGTGTAACAATTGTAAAGTAACAAATTTTG CCTGTCATTCAATACACTTTCTAAAGCGAACTGATGCAGAACAATTCATCTCAAGGCTTCAATTTTTCCCCTCAATATCAACAGGGCTCAAATTTATAAT AATCAACTAACTTCCAATTGGTTCATTCCATTCAAGCATACTTTTCTTTCACAACCTATGTCAAACGTGACATAAATGTTGCACATGCTACCAAAGGCTT TCAAATTTGTTGGTTTTTGTTCATTCACTCTTTTACTCTGGAACCCAAAAGGGCTTCTGGGGTTACTAAATTTCATAAACGATCAATAAAAAGAAACCAT TTTGGGTACAGAGAAGTATCAAAATTCTCACTTTATTGGGTTTTTCCATTGGAAATGTTATGTCACATTGACTATGTCTTTCCACACATTATTAGGTTCT ACAAACCTGTGCAAGTTAAGGTCTCGTCATGTTCAAGCTATGACTCCATCTTCAGTTATTATGAATGCAGATGAAAGTGGCAAAATTTCTCAAAGTAAGA AGCTTAATGGCTCAAATCTTGCTCAGGAATAAAGGGTGAACATGTTTCTCCTTTGATCAGTCATGGTAATGCTGTTGGTATAATTGGAAGGGTGTCTGTT GATACCACCTTGATTTTTTAAAGAAAACTTGTGGAGTTGAGTTCAGATTCTTCAGAAGATGGAGTAAATTGTGACATATGTTCAGTTTCATGTAGGTTGA TTTATTATGATAATATAATTGTTCATGATTGTTGAAGAATCACAGATGATATGCAAAAAATGTGACTTACAACTTACAACTTGGGAGTTGTTTGGAATTT GAATAAATGGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73413; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258368
| Blastp | Nuclear pore complex protein NUP93A from Arabidopsis with 74.47% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP93B from Arabidopsis with 73.36% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XPN3) |
| Kegg | Link to kegg annotations (AT2G41620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457997.1) |
| Pfam | Nup93/Nic96 (PF04097.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |