Ll_transcript_120414

Id TrinityFTRINITY_DN58220_c1_g2_i10
Name TranscriptLl_transcript_120414
SequenceTTTTAATTGAGTACACTTCTATAAATAAATTTAATTAAGTACATGGATTAGATGAGGGTAAGCTTAGGCGCAACGGTAAGGTTGCTTGCCTCGTGGCCTT GAGCTCATAGGTTCAAATCCTGGAAACAACCTATTCGTTTGAGGGTAAGGTTGCACAAATCTACTTTCTCCAAACCCTACTAGATGGGAGTCTCCTGTAT TGGGCTACCTTTTTTACATGGATCGGATATTGTTGGGTACACCTAGGTTCAGATTGTTCCAAAACTACGTCATTTTTGGCTAGGTACTTGTGACTTTTTC CTTGTTTTCTTCCCAACCTAACAATGATGTTGAATTTGAGCCATTTAATTAGTCTCTCACCCATAAATCTCACAGCTGATTTTGGGCATCAACCTCTCAT CTTGTGACACTTGCATTCCTTGTCGGCATCTTAGCAATATTTCTTCATTCAAGAAGTTGATCCTTACCTTTTGGATTAGAATACGTTGAATGGTGAGGAT TTGGAGCAACTCTTTTAAACTCATTCTCGGTGTGCAGTTTTTGCTATTATTTGGTGTATAAGGTTATAAAGGATTCATATTTTTTTAGAGATTCTTTCTC CACTTTAGATTTTTTTGGCATCCCTTTGGTTCTCTGCCCATGGACTTTTTTGTTGGTTTCTATTGTAGACTTGCAAAGGGATTGGAATGCTTTGATGCAG AACTCTATCTCCTAGCATAGTGGTTCCCTTTGTTTTTGTTTTTTTTTTGCAAGGATTTCTTATCACCTTCCTTTGTCACTATTCTCTTCTAATGAAATTT CCTTATATCTAAAAAAACAAATAATTGGTTTCTTGTTTGTGCATTTGGTTTGTCATGACAAGGAAATGCCTGAATGTCTGCTATTTTTTCTATGAATGTC ACAGTTTTTTCTTCTATGTTTCAGTAATGCATAAATGTAAAAATCTATATGGTTTTAGATTATATCTTTACTTTTAAACTATTATCATATTTGTATTTTA AAATAAAATACAGCTTTATTGATTTACTTAATCTGGTTCCTTCATTCTTATCCTTAACATTTCTTGAATTTATTGCTGGTGCCTGGTATTATTGACATAG ATTTTGTCACAAGAAAAGTAAGTTTTGGTAAACTAAGGGAATTACAATGATTAGAGTTTTCTCCTCCTCTTAAAAAAAGAACTGTTTTATTAGACTGGAG GGAATCTGTTTTCATTTCACTTGCTTTTTGATGTATGTAGTGGCTAACTTTAGTATGAGCTATCTCATTATCGTCCTCAAATTGGATATAAATTAAAGGA TATTTCGGTATGAATAGATTAGGCTGAGTTACACAACCAAAATCCCTAAGATATTATATGCTATTGATCATATTGGTCAGAATGACGAGAAGATGAAACG AATGGTTGCAGTGCTGATTTGGTTTGTAACTATTCGTGTTTAGATTTTCTTAAATACAAATGTCAGTATGCTGCATACTGAAATTTGCTTATTCGAGTTG ATTTTCACCAACTTATAGTGTTGATATTTGATAAAGAGCATCTATTGAGCTGAGTAGATTTAATACTTATGTTGCCAATTATGTTTCTTCGAATTAGATA ATTAGATTGGTTGGACATGCCATTTATTTTGGGAACTGAGAAGTAAGATAACCCATTAGTATGGAATTGCGGTAATAGTAGACGTACTATTATAATTTGT TATAGATCAAATGAAAAGTTTCACTTTCGATTTGTACCATTTACGAACTTTAAACTGTAAAGTTGTTCAGAAAATTGAAGTTGTCAGTTTAAAATATCAA CAAAGGTATATGTTCTACGGTGGGAGGCTAGGATGGAGGAGTTCTGAATATCATTATCCTTCAATATGATTTGGATTTTGGAAAGGGCAGGGCCTCACAT TTCCAATGGACTAGGACTCCTTTGAAGCCACATGTGTTCCCTGAAATTTTGATCAGATCTGGAATGGGTGTCGGTGGTCTGTGCTTAAGTAAGGGAAGGA TATCTTGGAGATGAGGCTGTGGTGGGGTGGGGAGCTTAAGGATGAGTTTTCACAAATTTGATGAAGGACAAGCGTCTTAGTATGTTTGGAGCATGGATCG TGGAGCTCTACAGCCTCCACCATGATTCTAGATTAGGAGTGCTTCTGGTTTTCTGTATTATAGATGGATTAGAAGTGCTTTCTCCTTTTCTCAAATGTGG CCATCTTCAAACATGATAAACTTACTAGTCTTTGTGATCCCTCGGACTTGTATTTCTGTCTCTCTTCATCCTGCTATAACATTTATTTTTGGACTACGGA AACTATCCTAATATATATAAATTTCTTTTATCATTTTAGGATTTTTGAGAAGTGGCACTTGACAGTGATTGGTTTGTCTGTCAAGTTGGAAATGTTTTTC AGAATTACCGCCTTACTAATTGTCAACCTTATAATGTTTGTGTTTGATATTCAGGGGGCACCACCTTGCACACATTATGCGCAACGTGGAGTATGTAAAT TTGGACCTGCATGCAGATTTGATCATCCTGTAGCACCACTGAGTTATAGTCCATCTGCTTCCTCCCTGGCTGACATGCCGGTTGCTCCCTATCCCGTGGG TTCATCAATTGGTACACTTGCTCCATCATCTTCATCATCGGAGTTGCAGCCTGACCTTACCCCAGGATCCAACAAGGAGGCTATTTCATCCAGGTTGTCT TTGCCAATGAGCACAACGACTGGGTCAGTCGGCTTGACTTTGTCAACCGGTGGATCTGTCTCTCAATCTAGCAGTCAACCATCTTCTTAGATTTCCAATC CTTTAGCTGCTCCCAGTACTACTACAAGTGGCAATGCCTTTCACATCTCAAGCTAAGCGATGTGAACGCAAACCACATCATTGCTCCTTTTTATCTCAAT TCTTCAACCGGACATCATTATTCAAGGAGGTCCTCAAATAGGTTTTATTTTTCAATTATCCATGTTCCATATTCAGGTGTAGTACACGTCCCACGAATTA TCCGTGTCCATAGAATCCTTTCTTGGCCATCCCTTTGATCTTGAATAAACCATGGCCAACCCATACAGCTACCTCGCTTTTGAATAACTCCAAAGGAATC TGCAACTCCATTATGCACATTCCATCCACTCTCCATTTTTTGGTGTTTGTTGTGCTTTATTTATGTTTCAATATTTTCTTATATTAGAAAATTCAGCCCA GATTTTCATTGACCTTACATATATGTTTCCTCAGCTGAACCTTTTTGAACCAGGAGACTGTCAATCTGTAATGAGGTTTCACATTGCTATCTTATATGGT TTTGGATACAGTGATGTTGTGACAATGAAAAGCTTGACTTGGTACTTCAATTTATTACAGAATATGTATATGAAGAAACACATTTAAATTAACACAAATG ATGTGTAATAACCCCTTTTTTCCTTCTCCATTTATATCTGTTTATTTGATCTGTTTTGATGTGAGATCAGGTAATTTTCTGGAGGGAATTTTTTATCTGT TTAACACTCCC BLAST
Tissueflowers
Gene nameLI_gene_75193; 
Additional informationdetails; 

Expression of Ll_transcript_120414

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_120414

BlastpZinc finger CCCH domain-containing protein 6 from Oryza sativa with 48.48% of identity
BlastxZinc finger CCCH domain-containing protein 6 from Oryza sativa with 51.76% of identity
Eggnogzinc finger, CCCH(ENOG410Y25U)
KeggLink to kegg annotations (4326236)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019439709.1)
PfamZinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;