Ll_transcript_120406

• Id Trinity: FTRINITY_DN58220_c1_g2_i5
• Name Transcript: Ll_transcript_120406
• Sequence: TGAGAAGCAAACAATGTGAGAGACCAATAGAGAAGCACCTTTTTGTGAAGAGTAAAGGTGAAAGACAAAAAATGAATGAAACTAGAGAGAGAAAGAAAAA GACCCACCAAGCTTAGTAGTACAAGAAAAAAAAGTAGTAGCAACAGTTTTTGTGTTTGTGTGAGAAAACAAGAGAAGAAAAAACATCATTTTATCTCTCT ACTTTCTCTCTCTAAAATCTCCATTTGATCGAACCTTCTCATTGTTTCACCGCTTCAATGGAGAGCTTTGCGAGGTCCACTGAAGGCTCTCGCTCCGATC CGTCGCTGGAATGGACCGGACACGGTGGCGAAACCGGTTTACAAGGGTCTATGTGGCAATTGGGGTTAGGTGGTGGTGGCGGTGGCGAGGAATCGTATCC GCTACGCCCCGGTGAGGCTGATTGTATGTACTATTTGAGGACTGGTGTCTGTGGCTATGGTTTGCATTGTCGATTCAACCATCCTCCTGATCGTGGCGCG GTAAATTCATGTTTAGATTTTGCCATTGAAGAGGTTTTGTGATCATGTTGGTTCGATCTTGGTTATGTAGAGTGGATAATCAGTGTTGAGCTTGATCATT CAGAAGGATTTTCATTATTGGGTTGTATTGATTCAAGTCATTGATTGAATTGAACTTTATTTAATTAACTGAAATTATGATGATCGCATTTAACACTCCA ATTTAATGTTTTTCCTAATTTGAAGATATCTGTGTATACTGTATAGGTTATTGGAGCTGCAAAGACCGGGGAGTTTCCGGAACGAGTAGGCCAGCCTGTG TGCCAGTATTATATGAGGACAGGATCATGCAAATTTGGTCCATCCTGCAAGTATCACCATCCTAAGGAGGGAGGAGGCACTGCTAACCCTGTCTCGCTAA ATTATTATGGTTATCCATTGCGACCGGTTTGTATTGCTTTATATTTACTGCATGAAACTATGCATGTTTTGTGAATGTCAGATCTAATTTTCTAATCATG GCAAAAGTTTTGCTCCAAATTTGATTTTTTATAAACAATAACAGGGTGAGAAAGAGTGCTCCTACTATGTGAAAACGGGACAATGCAAGTTTGGTTCAAC TTGCAAATTCCATCATCCACAGCCTGCTGGTGTCCAAATTGCACCACCACCACGGCCAGTTCCCCAAGTTTCACATTTATCTGTGCCCGTGCCTTCACCA TTATATCAAACTGTACAGCCTCCATCTGATCCTTTATCACAACAGCTTAGTGTACTGGTTGCAAGGCCACCTCTGCTACCTGGATCATATGTCCAGAGCC CCTATGGCCCTGTGGTACTGTCCCCTGCTATGGTCCCTTATTCAGGCTGGGCTCCTTATCAGGCTACTGCAACAAGCACCGTACTTCCTTCAAGTACTCC ATCTAATGTTGGTTCAGCACAGCTCTATGGGATAACCCAGCTACCTTCATTAGCAGGTGCTTATACTGGACCTTATCAACCTTCCGGTTCCGTAATTGGT CCTTCAAGCAGTAGTCAGAAGGAGCACTCACTTCCAGAAAGACCTGATCAACCAGAATGCCAGTATTACATGAGAACAGGGGAGTGCAAATTTGGTCCAT CTTGCAGGTACAACCATCCACCAGACATGAGTGCACCAAAAGCTACTGTGACCCTTAGTCCTGCGGGTCTACCTTTGCGCCCGGGGGCACCACCTTGCAC ACATTATGCGCAACGTGGAGTATGTAAATTTGGACCTGCATGCAGATTTGATCATCCTGTAGCACCACTGAGTTATAGTCCATCTGCTTCCTCCCTGGCT GACATGCCGGTTGCTCCCTATCCCGTGGGTTCATCAATTGGTACACTTGCTCCATCATCTTCATCATCGGAGTTGCAGCCTGACCTTACCCCAGGATCCA ACAAGGAGGCTATTTCATCCAGGTTGTCTTTGCCAATGAGCACAACGACTGGGTCAGTCGGCTTGACTTTGTCAACCGGTGGATCTGTCTCTCAATCTAG CAGTCAACCATCTTCTTAGATTTCCAATCCTTTAGCTGCTCCCAGTACTACTACAAGTGGCAATGCCTTTCACATCTCAAGCTAAGCGATGTGAACGCAA ACCACATCATTGCTCCTTTTTATCTCAATTCTTCAACCGGACATCATTATTCAAGGAGGTCCTCAAATAGGTTTTATTTTTCAATTATCCATGTTCCATA TTCAGGTGTAGTACACGTCCCACGAATTATCCGTGTCCATAGAATCCTTTCTTGGCCATCCCTTTGATCTTGAATAAACCATGGCCAACCCATACAGCTA CCTCGCTTTTGAATAACTCCAAAGGAATCTGCAACTCCATTATGCACATTCCATCCACTCTCCATTTTTTGGTGTTTGTTGTGCTTTATTTATGTTTCAA TATTTTCTTATATTAGAAAATTCAGCCCAGATTTTCATTGACCTTACATATATGTTTCCTCAGCTGAACCTTTTTGAACCAGGAGACTGTCAATCTGTAA TGAGGTTTCACATTGCTATCTTATATGGTTTTGGATACAGTGATGTTGTGACAATGAAAAGCTTGACTTGGTACTTCAATTTATTACAGAATATGTATAT GAAGAAACACATTTAAATTAACACAAATGATGTGTAATAACCCCTTTTTTCCTTCTCCATTTATATCTGTTTATTTGATCTGTTTTGATGTGAGATCAGG TAATTTTCTGGAGGGAATTTTTTATCTGTTTAACACTCCC
• Tissue: flowers
• Gene name: LI_gene_75193;
• Additional information: details;

Expression of Ll_transcript_120406

FPKM

• FPAB: 0
• FPNAB: 0.8
• LF1: 0.1
• LF2: 0.2
• LF3: 0.2
• LF4: 0
• UF1: 0
• UF2: 0.6
• UF3: 0.3
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_120406

• Blastp: Zinc finger CCCH domain-containing protein 6 from Oryza sativa with 48.79% of identity
• Blastx: Zinc finger CCCH domain-containing protein 58 from Arabidopsis with 56.57% of identity
• Eggnog: zinc finger, CCCH(ENOG410Y25U)
• Kegg: Link to kegg annotations (4326236)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439709.1)
• Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;