| Id Trinity | FTRINITY_DN58807_c2_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_49475 |
| Sequence | ATCAAATATTGAGCCCAAAATATTGAAGACCCTTCTTCCCTAGGGTTTAGTTTATAACAACGTTTCTTCATTTCATTCACTTCTTATCAAACCCATTTCG CCGCCATTCTATTTTGCTTCAAGGAAGGAGAACTTGATTTTTTGTATCAACAAACAACAATGTCAGGGTATGATCATTTTTGCTATCATGTTTAATTGTA TAGGGTAGTTTGTGTAATTTTGAAACTACAATGTCAATACTCAATAGGATATGTGACTATAGTTTTTGTTGTTATTGCTATTTGGAATTTGTGAGAACAA TATTCCGATCAATGTAGTATAATTGTCTGTATTATGTTACATAGCAGATAGCACACATTTGTGAACAGATGAAAGTAATGTTATGTATAGAATTTCAGCT GTTGTCATTCTTGTGTTTGTAATACTGTTTCACTCTCCAATTGTAAATCCATTACCAAGTAGTATATATTCCGGAAGTTCTCTGTTCGTTTTGTTTTGTT TAAATACAATACCAGTAGGGGCTTGAAAGTTTAGTTAATGTTGTTTTTGATATTTTATTATGAACTGCCATGTTACTGTAAGTTTAGCTTAGGTTTACTA ATTGGACATGGTCATCCTACTGAAAATTTTATCTTATATTACATGACTTGTCGAATGCACGTCGAAGTAGTTGTCATGTAGGATTTTTTTATTAAAGGTT GTCACCGTTCCTGTGAACATGCTTTGTAGTTAGTTTCTTTCTTGAATAGCATGGAAATCCTTGACAAAATAGCAATTCATATGAGTTCATATGCACATGA TATTTTCTCTATGCAGTGATGAAGGTGTTGTTGCAGCCGAGCCAGCTGCTGCTCCTGCCTCTGTAATTCCCGGTGAGCCTATGGACATCCTGACTGCCTT ACAGCTTGTGCTCAGAAAATCATTGGCTTATGGTGGTCTTGCCCGAGGCCTTCATGAAGCTGCAAAGGTGATCGAGAAGCACGCTGCACAGCTCGTTGTT CTTGCAGAAGATTGTGACCAACCTGACTATGTTAAACTTGTCAAGGCCCTCTGTGCTGAGCACAATGTTAGCCTTTTGACAGTTCCAAGTGCAAAGACCC TTGGAGAGTGGGCCGGTGTAAGCATCATCGACTCTAAACCATATTTACTTTTTTTAATAGGAAGCTTTGAATATTTAGTCTCAAAATATGTTGGTCAACA TTGATCTTTTGGATAAAAGATTATATATTTTTGCAAAGGAGAAATGTACAATGAGAGGAGAGTATGAATGAATATTCAACATTTTTGTGTTTACCAGATC ATTCTTTGGATATTCATTTTGTTACATTGTTTTCTTATATTAATTCTGCAATGTCTTTTCCTTCCAGTTGTGCAAGATTGATTCCGAGGGAAAAGCTCGA AAGGTCACTGGCTGCTCAGTTGTGGTTGTCAAGGTAGGATTTGTTTTGAAATGGAAATATCTGTATGGTATCTTGCCATGCCTTTTTATCATATGTTAAC CATTGGCTTCTTACAGGATTTCGGGGAGGAACACGAAGCCTACAATGTTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_80276; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_49475
| Blastp | 40S ribosomal protein S12 from Hordeum with 65.52% of identity |
|---|---|
| Blastx | 40S ribosomal protein S12 from Hordeum with 68.87% of identity |
| Eggnog | (ribosomal) protein(COG1358) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455434.1) |
| Pfam | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (PF01248.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |