Ll_transcript_50477

• Id Trinity: FTRINITY_DN58840_c0_g1_i6
• Name Transcript: Ll_transcript_50477
• Sequence: CCTTAAATTAAGCATCAAAGACCCTTTTCCAAATTATATTTAATTTTTCTATTGAAGCCGTTACAGAGGAAAAATATATATTTAATAATCATTTTGATCT AGGGTTAAATATTTCATCACAATCAAACTTTTCTACTACTTGTATTATTTATTTATTAACATAAGCTAGGTTATGCATTTTGGAAGTACTTTTTTGTGAG CCATCGTTTTTAGGATCTAGGGTTTCTCTCTCTTACGTCTTGTTCTTCAATTTGAAAATTCATCTTCAACAATCTTCGCAGCTATCAACAAAAACCCTAA CTTTTCGCCACCCAAAGATAAAAGGAACCATTCACCGAATACCCCAATCAAAGAGAGATTCAAAATCACGCGTTCCTGCATTAGTTTGTTGTTACTGTTC TTGGAAATTTTTTATTCCCAATTTCCATCGCCATCACCACATTTCAATCACATGTATATCTAAAACGAAAAAAAGGGAAAAGTTAAAGAGAGAATGTATG AGTCAGTGGTGTATGAAGGGGATGTGGTTTTGGGTGGTGTAGTGATACACCCATCAGAGAAGATAATTCATTTGAAGGAAATCAGAATAAGCCATTTTTC ACAACCTAGTGAGAGGTGTTCACCACTTGCAGTGCTTCACACCTTGGCCTCAACCAATGTTTGCTTCAAAGTGGAGTCAAAGACACCACAACAACAAGAT GGGCTTTTTCATTTGCACTCCTTGTGTATCAGAGAGAATAAGACTGCTGTAGTGCCACTTGGTTTGGAAGAAATACATCTAGTTGCAATGCATCCACGGA ATAATGATAGACCATGTTTCTGGGGAGTTGTCGTTGCCTCAGAACTTTACAATTCATGCCTTGTGATGTTAAACCTTAGATGTTTGGCTATAGTGTTTGA TCTAGATGAAACACTTATAGTAGCAAACACAATGCGCTCGTTTGAGGATAAAATTGAGGCACTCCAGAGAAAAATAAACTCCGAGGTGGATCCACAGAGA ATTGCTGGTATGCAGGCAGAGGTCAAACGCTACCTAGATGACAAGATTATATTGAAGCAATATGCTGAAAATGATCAGGTTGTTGATAATGGGAAAGTAA TAAAAGTTCAACCTGAGATTGTTCCAGCATTATCTGATAGCCATCAGCCTATAGTTCGACCACTGATACGGTTACAGGAAAATAACATTATTCTGACACG CATCAATCCACAGATTCGTGATACAAGTGTTCTTGTGAGGTTGAGACCTGCATGGGAAGATCTTCGGGGTTACCTGACCGCAAGAGGGCGCAAGCGTTTT GAGGTTTATGTTTGCACAATGGCTGAAAGGGACTATGCACTAGAAATGTGGAGACTTCTTGATCCGGATTCAAATTTGATAAACTCTAAAGAACTATTAG ACCGCGTTGTGTGTGTTAAGTCTGGTTTGAAGAAATCATTGTTCAATGTCTTCCAAAATGCTTTATGCCATCCGAAGATGGCATTGGTAATTGATGATCG CTTGAAAGTGTGGGATGAGAAAGATCAACCTCGGGTGCATGTTGTCCCTGCATTTGCTCCATACTATGCTCCCCAAGCTGAAGCAAGCAATGCTGTCCCT GTCTTGTGTGTTGCAAGAAATGTTGCTTGCAATGTTAGAGGCAGCTTCTTTAAGGAATTTGACGATGGTCTTTTACTAAAGATTCCTCAAATCGCCTATG AAGATGATATCAAAGATGTACTTTCTCCTCCTGATGTGAGCAATTATCTAGTTTCAGAGGATGATGCATCTGCTTCCAATGGAAATAGAGATCCAACTTT ATTTGATGGCATGACAGATGCTGAGGTAGAAAGAAGATTAAAGGAGGCGAATATATCAGCTGCTTCAAGTATCCCTGTGGCAACTGCTAACCTAGATCCC AGCCTTACTACCTCTTTTCAATACACAGCAGTGCCTTCTGTTTCTGGTTCAGTTCCACCCCCACCAGCACCATCATCTGTGTTGCAATTTCCCAGTGTAC CATTCCTTCAACCTGCTAAGCCAATGGGTCAAGTTGCCCCTTCAGGACCAACCTTGCATAGTTCTCCTGCTAGAGAAGAGGGTGAAGTACCGGAATCAGA ATTAGACCCAGATACAAGGCGTAGGCTTCTCATATTGCAGCATGGGCAAGACATAAGGGATAACAAATCTAGTGAGCCTCCATTTCCCATTAGACAGCCT TTGCAAGCTTCAGCTCCTTGTGTGCCATCACGTGGGGCATGGTTCCCTGTTGAAGAGGAGAATGGTTCCCAGCAACTTAATCGGGATGTACCTAAAGGAT TCCCTGTAGATTCTGAGCCACTGTGTATTGAGAAGCATCAGCCTCGTCATCCATCCTTTTTTTCCAAACTTGACACCTCTATTTCATCTGATAAAATTAT CCATGAGAGCCACCAAAGACTGCCGAAGGAGATGTATCATAGAGATGATTGCTCAAGGTTAAGCCATAATAAACTCTCTACTTATCATTCATTCTCTGGT AAGCATGTTTAGGTACTATGCATGTTTAGTTGTTTCTCTGCTGCTTTTTCCCAAGTCTTCTCTTCTCATGTCCTGATTGATGGTGTTTGGCTGCCATTGT TTGGTTTTGAAATGTAATTCAGTTCGAGTACACTTTTGTTTTGGTTTCTATGTTTAATTAAGATGACTGATTTTTCTTTTTTATTTCCTTTTTGCTTTAG CATTTAGTAATTATTTAGCTTTGGACTATTGTTTTCTTCTTAAAATATACTTTTTGACTCTCACAATTATATCCTCCTCTATTTAATAAATATATCTTTC TAGATCATTCCCTTTGTCTTCCTTCACTAAACATAAGCATTAAAAAACTTTTTTTCTTGTTGTCTACCTTTTGTTTTTGTTTTCATTAACTGGTTCCCCC TTCTCCCAGTTCTATTTGTTTTTATGGTTGTTATGAAGGTGATGACATCCCCTTGAGTAGGTCATCTTCCAGCCACAGAGATCTTGACTCAGAGTCTGGT CATTGTCTATTGCATGCAGATAATACAGTTAGAATAGTACAGGAAATTGCACTGAAGTGTGGAACTAGGGTGGAGTTCTTGTCATCTTTAGTTGCTAGCA CGGAACTGCAATTCTCTATCGAGGCATGGTTTGCGGGAAAGAAAATTGGGGAAGGAATTGGTAGAACAAGAAAGGAAGCCCAATATAAGGCTGCCGAGGA TTCTATTAAACAATTAGCTGATATATATATGTCCCATACAAAGGCTGATTCTGGTTCCACTTATGGTGATGCAACTGCGTTTCCTGGTGTGGAGGACAAT GGTTTTATGAGTGGTGTTAATTCTCTTGGTAATCAGCTATTGCCTAAAGAAGAGTTGGACTCATTTTCAACTGCATCGGATCCATTAAGGGGGCTAGATC CTAGATTTGAAGTCAAGAGGTCAATGGGTTCAATTTCTGCCCTCAAAGAATTGTGCATGATGGAGGGTCTAGGTGTCAGTTTTCACTCTCCACCTGCTCC TGTGTCAACAAATTTTGTACAGAAAGATGAAGTACATGCACAGGTTTGTTGATATACTACTCCAAACAAATGGAGTTAAAATTATTAGTGTCTTTAAATT TCTGAAGGGTTTATGCTTCTCTCTCCCCTTCTATACTAGTTTCTCATTTATGATTTTTAATTTGTATTTATTGTAGGCACAGAGCTTACATTTTTCTTCT TTTCTATTTTCACTGCATATTTGGCCCATAGGGTGGCGGTTAGCGAGTTAAATGTTCCCTAGATGGAATTCCAGAACATTCTTAAGTTGCCTTCACTTTT ATATATACGGCTTACAATTATTTTTGTTTTGAGAATTGGAGGTGAATAGTTACTGGTATACTGACATATAATTGAAATTCACTTTTACTTTCTCTAGTGT GATAGTTTGGCAAAAACATCATCCTGTAGTTGTGTAGGGCTTATAAGAAGTGAAGGAAGCCTTCTTTCTTTTCTATAAATACATTTTTAGGCTTAAATAT ATTTTTTTGTCCCAGAAAAGTATACCGAATTTTGGTTTTATCCCATACAATTTAATTTTTTTGGGTTTTGGTTCTTATATCTTCCCAAAATTTTGATTTT ATTCTCCAATGATGATGTGGCTAACACCAACATGTGACACATGTCATACTATCTGATGGCGTGAACAATTGTGGTTTTGACATATCATTGGCAAGGACAA GAAACAAAATGTTCAACATTACCTATATTGTTGACAGTAAAAAATTATTTAAGCCTACATTTTAGGGTCTTGTTTTTCACCCACGTTAATGTGTTCCTTT TTTTAGTAAAAAGATCTAAAGTTCTCTAATGATTTAGGTCGAAATAGATGGTCATGTGTTTGGTAAAGGGATTGGGTTAACATGGAATGAGGCTAAAACG CAGGTATCTTATTTGCTTTAGTTATGAAAATTTCTTTAAGCATGCATGTCTTTTTGTATGAATTTGATTATTATTATCATTATCTTTTGGCTAAATATGG TTTTGGTCCATGCAAGTTTAGTCAGTTTTGATTTAGTCTTTATATTTTTTTATGGGGAGGGATCAAGTTACTCCAAGAGTAACTCTTTTGGACTTACTCC TCATCTTAGCGATCAATTTCTAGGAAATCCAAGGGTTTGAATTAATGAGTAG
• Tissue: flowers
• Gene name: LI_gene_80538;
• Additional information: details;

Expression of Ll_transcript_50477

FPKM

• FPAB: 0.2
• FPNAB: 0.2
• LF1: 0
• LF2: 0.2
• LF3: 0.1
• LF4: 0.1
• UF1: 0
• UF2: 0
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_50477

• Blastp: RNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 62.64% of identity
• Blastx: RNA polymerase II C-terminal domain phosphatase-like 1 from Arabidopsis with 62.64% of identity
• Eggnog: CTD (Carboxy-terminal domain, RNA polymerase II, polypeptide A)(COG5190)
• Kegg: Link to kegg annotations (AT4G21670)
• CantataDB: Link to cantataDB annotations (CNT0000254)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433418.1)
• Pfam: NLI interacting factor-like phosphatase (PF03031.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;