Ll_transcript_365330

• Id Trinity: TRINITY_DN46318_c0_g1_i4
• Name Transcript: Ll_transcript_365330
• Sequence: AGGAAATCTCCTACTCTATGGGAAACATACTAATCTTTTTTTGTTGTGAATTGTATAAAGCCCATGAAGGCTTTGCTCTCTAGAATTAAATCTTTAACTT TTGGGCTAACATAATATCTGTATATCTAGTCGGACCTTATATAACTAGACCAATACCTCTCGTATGTTATTGTCTCTTACCTTACCTTGTTCTGTGTTTT TGACACTGAACCAAGTAGCATAATGAATCTGAGACCTTAACACATCGAACCGGTTTTTTCACTTTCCAAATCTCAAAACCCTTTATTCCCTTTTCTTCCA ATGCAAGACGACGAAGACGAGTTCGGTGATTTGTACGGTGACGTTCTCTTACCCTACACCGCACCCCTCTCTAATTCCGATGCACCCATTCTTTCCACCA ATCAAATCACTCTTCCTCTCCGCCCTGATTCGACCCGCGCCGCCGCCGAAGAGGAACCAGATGACCGAGCTAGGGTTCGTGATGGCGTCGCCGAAAGCGT TTCGAAATCAGAAGAAGATAGGACTTTGCTGGATTCGAAGAAGGAACTTGTTGCTGCCATTGATGGGGAAGGTGTTGATTTGCTGGATAAGGAAGTGAAA TTTGATATCGAAGACGATGATGATGGCAGCGGCGGTGGTGAAATTGGAGAGGTTGGTTCGGAATTGGTTATTCCAGGGCTATTGTATGAGGATGATGGCA GTGGTGGCGGCGGCGGTGGTCATGGAGGTGGTGGAGGCGTAGGTGACGGTGATGATTGGGATAGTGACAGTGATGATGATTTGAAGATAGTATTGAATGA CAATAACCATATGGCTGCAATGGAAAGAGGTGGAATAGTTGATGATAATGATAATGATGATGACGATGATGATGATGGTGAGCTTGTTATTGTGACGAAT GGTGATCCGAATCAAGGCGTGGAGGAACAAGAGTGGGTTGAGAATGCAGCACTACCTGTGGATGGTGAGAGGAAAGATGAAGGGGAGCCTGGAAAAACTG CTGTTAGCGGCAGTATGATTGTGGCACCGAAAGTTGGGTATAGCAGTCATGGTTATCATCCATTTCGGGCGCAGTTTAAGTATGTTAGGCCAGGTGCAGC ATCAATTCCAGGAGCTACTACTTCTGCTCCAGGAGGACCTCCTGGCCCGATTCGTCCACTTGTTAACATGGCTGGTCGTGGCCGAGGTGATTGGAGACCA CCTGGAATAAAAGGGGCTTCAATGCAAAACGTTTTTCATGCAGGACCTGGATTACCTGGTTGGGGCAATAGTGTAGCAGGCCGAGGTTTTGGTGGTGGAT TGGAATTCACTCTTCCTTCTCACAAGACAATATTTGATGTTGAAATTGAGAGTTTTGAGGAGAAACCATGGAAATATCCAAATGTTGATGCATCGGATTT TTTCAACTTTGGCTTGAATGAGGACAGCTGGAAAGATTATTGCAAACAACTGGAGCAACTGCGCCTGGAGTCTACGATGCAAAGCAAGATCCGTGTTTAT GAGAGTGGTCGAAAAGAGCAGGATTATGATCCGGATCTGCCACCTGAATTAGCTGCAGCTACTGGTATACATGATGTAACTACTGAAAAGGCAAATTCTG CGAAGTTAAATGTCGGACAAAGTGGTGTCATGAAAGGTTCTGGGCACATGCGACCATCCCTACCAACTGGTAGAGCAATACAGGTAGAAAGTGGCTATGG TGAACGACTTCCTTCGATTGATACCCGCCCTCCTCGAAACCGTGATTCAGATGCGATCATTGAGATTGTTTTACAGGATACCGAAGATGATGGTTCTTCT GCAGGAAACTGTGTCCAAGATGAAGCGGAGGACGGAGAACCCCAGAGAGAGGATTTTAGAGAAGACCATGTAGCTGAACTTCCAAGGTTGGAGCCTGAGT ATTTTGATGGTTTTTCACGGGACTATAATGGTAGAAAGAAAGAGCTTGCAGGAAGAATGCCATTTATGAATTCTAGTTCTGCTGACATGCCTAACGGAGA TGAAAATTTGTTCTCCCCACAGGAAGAGCCATTTTCCTACTCTGGTTCTAGGGGCCCAAATCCTAGGACCTGTGGTGTCAATGTCAGCTCCTCCAGTGAA GAAAGGCGAACACAAAATAGAGTGCAACCTCAGTCTCCTCCTATTACTCCTATCCGAGAATTGGTAACTATTGATGATAAAAAAGAAGAGTCAGTCGAAA GCATGGAAGTCAGACATAATGCACTTCTGTCATCTCCTGTGATTAAGGACACAAGGGAGTCCAGTGTGGAGGACATAAATACTGAGCTTGAGGACACTGG GGCAGCGGATGAACGATCCAGATTGGAAAAGGGAGTAGTAAATATAGATACAGTAGAAAAAGTAGACACGCTTAAGGATAGGAGACAAATATTAACATCT GATGTTGAGCAACCTTTGCTTGATGAAGTTGATGATCGAGAGGACTCAAAATCTGCAAGAGGCAGTTATAACAGCAAAACAAGATCATCAAGCAGCAGGG ATACTCAGAAGCAGCAGGAAGGTTTTGAGGAAGTAGTTCAGGATCCACGATCGGCACGATTGGGTAGCATCAGACAGCACCCTGATGAAAATGAGCAGGG ACTCTATAGAAGGGAGCATGATGGAAAGCAGGAACCTGAAAGAAATCGCATGATACCTAAAGGTAGAGAGGGATCATACCCTTACAGGGATCGGCATCCT AACCCAGCTCATCGTTTGCCCACAAATATGGATGGGTTAGATAGGCAAAAACTTAGGGACAATTCTGACATGGATTGGACAGAAAGAGATGATCTCTATA TCAGAAGGATTAGAAATGATGAACATAGAAAGAGGGACAGGGCTAAGGTTCAAGAAAATGAGAGAAACGACAAAGATGATAGCCTTCATTCTAGAACACA TTTCGATAATGTCAGCTACAGGGTTCCGTATGATAAGGATGTTGGGTCAAGAGATTCAAGACATAGGGAAAGAGATGATGGCTCGAGGATCAGGTATGAA ATTATGGAGGATTACCATAGCAAGAAAAGGAAGGACAAGGAATACCTCAGGAGGGAGCATATTGACAAAGAAGAAATTCTGCATGGCTACAGAGAAAATG CAAGTCGGCGAAGGCGAGAAAGTGAATTGTTGGACCCACGAAAGAGAGACGACTTTAAAAGAAGTAGAGATAACTTTGATGATCAATATGTTGCCAGGCA GAAAGATGAGACCTGGCTATTGAGGGAAAGGGGTGATAGGCAGAGAGAAAGGGATGAGTGGCATCAGATGAAACAATCCCATGAAGAACACGTACCTAAG CGTGAAAGAGAAGAAGGACGGAGTTCTGTAAGAAATGAACGACGAGCTGAAGAAAAATCATTGGTTGGCCATGTTCGGACTAAGGGTGAAGTTAAAATTT TCGACAAGGAATATCAATCTAAAGAAGCATTGCGGCACATTGACCAGTTGAAGAGGAGAGGTCGGGTTCAGGATGAAAGTACATATCGCAAGGGGCGTGA TGATGCATATGCCAGTGGAAATCAATATAATAGTGAAGAAAGACGATGTAGGCAGGAAAGGTCAAGTAGTCGCGATCATGCTGCTAATGCTTCAGATAAT CGAAGAGCTAATGGGAGAAAGCAAAATGAAGGCTCAGGGAAAGGCAAAGAACCTGATGTTAATAATCTTAATAGTTTAGGCCTGTCCAGGAGCACTCAAG AAAATCTAAGTGGCCCAACCAGGGAGAAGGACTTGAAAAGCTCCAGTGAGGAAGAACGTGCCGAGCATGAAATTCCAGGGCATCCCCTGTCCAGAAAGCG TCAGGAAGGTATTTCAGATGATGAACATCAAGATATCCAAAGAGGACGTTCTAAATTAGAACGCTGGACAAGCCATAAGGAAAGGGATTTCAGTATCGGC AGCAAGTCGTCTTCTTCCTCGAAGTTCAAAGGCATTGACAAGGATAATAACATTAAGCCTTCTGATGCTGGGAAACCAGTGGATGATTCTGCTAAAAGAG TTGATGTTGATAACCAACATCTTTTGTTGGCCGAAGGGAAGGATACTGTAGAAATGGATAGTAAGGATTCTGATATCAAAGGATCGGGTGATCAGCAGCT TGACACAGTTCAGAGGTTGAAAAAGCGTAGCGAACGGTTCAAGCTTCCAATGCCGAGTGAAAAAGAGGCTCTGGCTATGAAGAAGTCAGATAATGAACCA CCACCTTCTGTCAAAAGTGAAATTCCTGTCGATTCAGAAGTCAAGCATGAGCGGCCACCCCGAAAAAGGAGGTGGATCAGTAACTAAATGAGAAATCTAA GGCCATCATTATTTGGTCTTCATGTGAGAATTTCTGCTTGGGCTGATCCTCTTAATGTCTAGAACCTTGGCAAGCCAGCCATGCTTTTAATGTCAGAAAT AGCATCTACAGGGTTTGGAATAATTTGTACTGCAGTTATATCATTTTGCAACCTATACATTTACTGTACATTGTATATACAGGTAGAATGTAAAACATGA ACTGGTCACTACAGATGGCTCATATTTCGGGCATTGAAATGTGGTTCTTAAGAGTCTCTTTGCAAGTTGAGTTTTAAATGGGGAGAAGGGAAATCATAGA CTCGGAGTCACCTCACAGGTGTATTTCATAGATCCTAAGCCTCCACTTTCCCTTCTCTCCTTGGAAAATCCAACTCGCAAACATACCCTTAATGGTCTTT GATTATGAGGTGAAGGTGACCAAGGCTGGGTGCAATCTAACATTCAGAAATCATGTTGGCATGGCTGGTGTGAGGCAATGAGGCTGTTACTGCCACCTTC CTGTGGCATGGAAGCTCCAAGTTTTTGGAAAATGATAGACATCTTGGTGAATCATAGATGTCAGTGTTGATTACACTTTGTTATAGACTTCAAGCAAGAA CTTGATTACTTTTTCTTTTCGCTGTTTCTCTTTCATTTTTACTACAGAACCATAAAACTTACTTGAGAGACTGTTGTATCTATAGATCTGACATGTAGTT ATAGATTAGAAATTTCTACAAAGAATGAAATATAGCAGTATAGATTATTGCCATTTTC
• Tissue: pods
• Gene name: LI_gene_143747;
• Additional information: details;

Expression of Ll_transcript_365330

FPKM

• PAB: 0.7
• PNAB: 3.5
• PS1: 6.1
• PS2: 3.8
• PS3: 5.4
• PW1: 3.8
• PW2: 4.3
• PW3: 4.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_365330

• Blastp: FIP1[V]-like protein from Arabidopsis with 47.69% of identity
• Blastx: FIP1[V]-like protein from Arabidopsis with 56.23% of identity
• Eggnog: mRNA processing(COG5213)
• Kegg: Link to kegg annotations (AT5G58040)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415133.1)
• Pfam: Fip1 motif (PF05182.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;