| Id Trinity | TRINITY_DN46404_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_390224 |
| Sequence | TATGTGCATGCTCATTCTCTCTCAGCTCAAAATGATCATTTTTTGAGACTTCATATGTTTTTTGTTTTGTTGTACTTTTTATGTGCATGCATGTGACCCC ATTTGAGTTTCTTGATTTTTTTCTTTGTTCATGATGATGAATTGCTACTAGGACTTCTACCTTGTCTAGTTTGTTGTAAAGTTTTCATCTTTTATCTTTT TATGATTCATGATAATTCAGCTTCTTTTTATGATTCATAAAATCTATGTTACTGGTATCTTTTTTTCTTTTTCTGTATGCTGTTATGTGAAAATGCCATC AGCATATGAGATCCTTACAATAGAAAAAGAAACTTGTCTCCTTCATTTGTTTAAAAAATGTTTCTTGGGAAAAAAACATTCTCTTCTAGTTAAGTAGAAG TTTTTTTTCAGTTTAAACAAATTTAAGTATCCAAATTGCAAAGGGTTTTCTACTTGTTTTGTTTTTCCATGTTCTGTGATTTTATACTGAAATCTAGCTT GTGATTGTGCAGAAGGAATTGGATATTGATAAGCAAACAGTATTGATCTGTAACTTTCTGTAAGGGACTGAGAAAGGATGCCAAGCCAGCTATGGTTTGC ACTGCCAATGATTTAAAAGAATGGGAAGATTTTCCTAAGGGACTAAAGGTTCTTCTCCTTGATGATGACATTGATTCGGCGTCCGAGATACGTGCAAAAC TTCAGGCCATGGACTATAATGTTTCTACATTCTGCAATGAGCATGAAGCCTTGTCCGCAATCTCAAGTGGACCGGAAGACTTCCACATTGCCATAGTGGA GGTGAGTACAAGCAATAGCCTTGGAGGTTTCAATTTTCTTGAAAATGCCAAGGACTTGCCAACCATTATGATTTCAAACAACCATTGCTTGAACACCATG ATGAAGTGCATAGCACTTGGTTCAGTTGAATTCCTAAGCAAACCACTCTGTGAGGACAAGCTCAGAAATATCTGGCAGCATGTGGTTCACAAGGCATTCA ATGCTGGAGCAAGTGTCGAATCTGAATCACTAAAACCTGTCAATGAATCTGTAGTGTCCATGTTGGAGCCCGGAAAAGGCAATGGACAAAATGAAACTAC AATATCAGTTGATTTGGAGAAAGCATCCAGCTTTACTGATAATGATACTGAGCAGTCTACTGGAAGTGATAAGTATCCGGCTCCTTCAACCCCGCAATTG AAACAAGGAGCAAGGTTACTGGATGACGGTGATTGCCAAGAGCAGACTATTTGCTCAACAGAAAAAGAAAGCAGTGAGCTTGATGGAGAATCTAAATCTG TCGAAACTACGTGTGGAAATTTGAATGCTCAAAGTACTTCACAACAAAGGGAATCCGAGAAGATTCCGGTTAAGAAGGAAGATGATCTTGCCAACCAATC TAAGGATGAGAGTGGAAATGCTGTTTCTTCACATCCGTGTAATGTAAAGGTTCAAAGCAAGGCTGATAGTAATAGAAAATCTCCAAAAAAGGTCGGGGTT CTCAGTAATTCATGTGAGAAAAAGGGTAATCGGAAGAAGATGAAAGTAAGCTGTTTATGATTATTCATTCTTTGAATCATGTTCTTCTAACCGTCTTGTC TGTACTATTTGCTTACACATGCTCATGATGCTGATATAAATGACTATATGGCTCACATAACCAGACAAATATTTCCAAACTTTTCTTTCATCTGTTAATC TTATCAATGTACTGTATCTGCATACATGGAGTTAATCGAGATTTCATCTCGAAATTTCCATGTTCATTAAGTGGTTAAAGGAAAGTTTGTTACGGAATTT TCAATTCTTAACTAGTCTTCGAATGGAAATCTTAGAAAGGACAGTTCCAATGCAGATTTTAATTGAAACGGGTTGGTTAAACAGCAGATCCAGCCTTAAT TTTTCATTATCTTCGGTTTTAAATAAAACATACTGTCAAGTGATGCAAAATTCATTGACATATTGTTGTTATCGAAGTAGAAATTTATGACCCACTGACA AATAACTATTGAAATTGAAAACAATGATGTAACTTTTGAAATACTCCAACCACACTGTCATTACTAAATATTTTTGTAGATTCATACATGTTGTGTTGTT CATTGCTTATGCATGTTCTTGCCATATAAGGCTATTAGTTTGTTATATAAGTTATCTGTAGTTTTGATTATCTGAATACAGTTTTGGTAATTGATTTTGG TCTCAGGTAGATTGGACACCAGAGCTGCACAAAAAATTTGTGAGGGCTGTGGAACAACTAGGCATTGAACACGCCATTCCTTCTCGAATATTGGAGCTAA TGAAAGTGGAGGACTTGACAAGGCATAATGTAGCAAGCCACCTTCAGAAATATAGAATGCATAAGAGACACATCTTGCCTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144407; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390224
| Blastp | Two-component response regulator-like APRR2 from Arabidopsis with 48.36% of identity |
|---|---|
| Blastx | Two-component response regulator-like APRR2 from Arabidopsis with 48.36% of identity |
| Eggnog | Transcription factor(COG5641) |
| Kegg | Link to kegg annotations (AT4G18020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430479.1) |
| Pfam | Response regulator receiver domain (PF00072.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |