| Id Trinity | TRINITY_DN46462_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_390063 |
| Sequence | TTATGTTCCTTAATTAGAAAAGTTATCTCGTTGTTTCGTTGTTGAGATAGTTTATTCTCTACTATTAATATAGGAGAATAAGATATCTTCGTGCCACATG TGAATGAATTTAAGGGCATAATTTGTATCTAGGAGATATACTTTATTCTCGTATATTAAATTGGTTCTGGTGAACAGTGAAGTAAACTAGGTAGTTGGAT TTGATAGTGAGAGTGAGAGAGTAGCGATGGAGGGTAGTGCCATGCACAATCCGCGTTCGGTGGAGGAAGTCTTCACCGATTTCAAATCCCGTAGAACTGC CATCATTAAAGCTCTTACTATTGATGTTGAAGACTTCTTTCACCAATGCGATCCTGACAAAGAGAATCTTTGCCTTTATGGATTTCCTAGTGAACACTGG GAAGTCAATCTGCCTGCTGAGGAGGTGCCTCCAGAGCTTCCAGAGCCAGTATTGGGTATTAACTTTGCAAGAGATGGGATGCAACAAAAGGACTGGCTTA CCTTGGTCGCTGTGCATAGTGATGCATGGTTACTTTCTGTGGCATTTTATTTCGGTGCCAAGTTTGGGTTTGATAAGGCTGATAGGTAATTATTTTCCTT TCCCATTCATGCATTGTTTTACTCTGCTGGCTAGTGTCTATTATTTTCTTTTGTATATTTTTTGTCTGAACTCTGAAGATGTATAGGTTTATTGTCAAGT AGCTGGATGACTGACATTGTTTTCATATTATTGTCCAAAATTTATAACAAGGGCAGTTCTTTTGCTTCTTTATTGGCACGTGAAATAAGACTAAAACAAT ACATTATAAAAAATGAATCTTCAGACACAAGTGATGAATATCAAATAAATACACATAATGAAAGCAGGCAGAGTTGCATGAGAACAGTTTTGTACCTAAT ACATTTAATTGCCTGTTTGCTATCTCGACAGTTGCATGAGGAAAATTCTTTGACTGTTGAATCAGAATATGAATTTATGACTTATTTGGTTTTTGGTTGT ATCATACTTTATTATTAGCATAGTACCTGTCAATGCATTGGTGTGTTGTTCTTTTTTTGCCCCTTTTCATTAATGTGCAACTCAATGGAATATTTAAAAG ATGTTTGTTCAAATAATAGTATGTCATTGACATGTGGTTTTGGGAGTATAGAGTTTTGGTCTCAGTAAGGCTGACTTGAGATAACATGTAGTTTCAGAAA CATTTTAACACTGGACTGTTCAATTTCAGTTCCACTTTTGTTACATTTGAAAACTGAATCTGTAATTTATACTACCACTGTTCCATACTGCTGGAGGAAC TCACTCAATAACTTTGGGTGAAAGACAAAGTCCATACCGTATCAAGTGATATGTACTAATCACATGGAAAAGGTCTATGTTTCATGACTTGCACTTTTTG TGTGCCAAATACTTGTGTTAGAATATATATGAAAAATATGTTATAATATCATTGTTGTATCCTAGAATATCTTATAGCATTCTAGATGATCTCTTACGGT TTATTTCCTATTTAGATTCCCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144802; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390063
| Blastp | PHD finger protein ALFIN-LIKE 4 from Oryza sativa with 73.04% of identity |
|---|---|
| Blastx | PHD finger protein ALFIN-LIKE 9 from Oryza sativa with 82.76% of identity |
| Eggnog | chromatin modification(ENOG410XP9I) |
| Kegg | Link to kegg annotations (4335954) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414262.1) |
| Pfam | Alfin (PF12165.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |