Ll_transcript_435478

• Id Trinity: TRINITY_DN46641_c0_g3_i2
• Name Transcript: Ll_transcript_435478
• Sequence: AATTCGTCTAATCCATCTCATGGAAAAATCCAACAGAAAATGAAAGCTTATTTTCAATAGATAAACTGTTAATATTAAACAAAATCTAGAAAGAAATGCA CCCACCCACACATATCTTTTGCTCACTCTCAAATTTAAAATCTGATACACTCCACTTCAACTTAAACAAATACTTATAAACAACCATCTAAAATTCCATT TCTAACCGAAGAAACATCACAGCCTAGCTTTTCTTGGATCCGGAGATTCTGGTAAACCTACAAGGGGAAGCTCTTCTTTCATGGAAGAGAACCCTGAATG GGTCCCTGGATGTGCTGAGTAATTGGGACCCAATTGAAGAGACACCATGTAGCTGGTTTGGAGTGAGCTGCAACTTGAAGAACGAAGTGGTACAATTAGA TCTGAGGTATGTGGATTTGCTTGGAACACTGCCTTCAAATTTCACCTCATTGTTTACATTGAGCAAGTTAATCTTAACCGGAACGAACCTCACCGGTTCA ATCCCAAAAGAGATAAGCAATCTTGATCAGCTCAGCTACTTGGACCTAAGTGACAATGCCTTGTCTGGAGAAATTCCAAGTGAGCTCTGCTATTTTACAA AACTTGAGGAGCTCCATCTCAACTCCAACAATCTGGTAGGGTCTATTCCACTTGCAATTGGGAACCTCACAAACTTGAAGAAGCTAATCCTGTATGACAA TCAACTAAGTGGTGTAGTTCCAAGCACCATTGGAAACTTGAAGAGCCTAGAAATTCTCAGGCTTGGGGGGAACAAGAACATAGAAGGTTCTATCCCACAG GAAATTGGAAACTGTTCCAATTTGGTAATGATGGGTCTAGCTGAAACAAGCATCTCAGGCTTTCTACCCCAAAGTATTGGCCTACTAAGAAAGCTTGACA CCATTGCCATTTACACTTCCCTCTTATCTGGCCAAATACCCTCAGAACTTGGCGACTGCACAAACCTACAAAACATCTACCTTTATGAAAATTCCCTCAC CGGATCCATACCCAACAGATTAGGAAACCTTAAAAGCCTCAGAAACCTTCTACTCTGGCAGAACAACCTAGTTGGCACAATCCCACCAGAGATTGGAAAC TGTGACCAGTTATCAGTTATTGATGTGTCAATGAACTCAATAACTGGAAGCATTCCCAAAAGTTTCGGCAACTTGACATCGTTACAAGAACTTCAACTCA GTATGAATCAAATTTCTGGGGAAATCCCAGCAGAGCTAGGTAACTGTCACCAATTGACTCATATACAGCTTGACAATAACCTAATCACGGGTACGATTCC TTCCGAATTTGGAAACCTAGGGAATCTTACACTGTTATTCCTTTGGCATAACAAGCTTCAAGGTAACATACCCTCTTCACTTTCCAATTGTCAGAATCTA GAAGGGCTTGATCTGTCTCAGAATTCATTGACGGGTCAAATTCCAAAAGGGATATTCAAGTTGGAGAATCTCAACAAGCTTTTGCTTCTCTCAAACAATC TCTCTGGGAACATAGCTTCTGAGATTGGGAACTGTTCCTCTCTGATTCGGTTCCGAGCGAGTGATAACCAAATCACTGGGAATATTCCACCGCAGATTGG GAATCTCAAGAATTTGGACTTCTTGGACCTCGCTTCAAACCGGATTTCGGGATTTATACCTGAAGAAATCTCTGGAAGCCAGAACCTCACGTTTCTGGAT TTGCATTCCAACTTTATCGTTGGGAGCTTGCCGAAAAGTCTGAGCCAGCTTGTTTCGCTTCAATTTCTCGATGTCTCTGAAAACATGATCGAAGGAACAT TGAACCCTAGCCTTGGATCCCTTGGCGCCCTCACGAAACTGGTTCTAGGGAAGAATCGTATCTCCGGTTCAATTCCGAGTCAACTCGGTTCTTGCGCGAA GCTACAGTTGCTGGATTTAAGTAGCAACCAGATTTCCGGGAAAATCCCCGGCAGTCTAGGGAACATTCCGGCGTTGGAAATAGCTCTGAATCTGAGCTTG AACCAACTCTCCGGTGAGATCCCCAAGGAGTTTTCAGATTTAACGAAGCTCGGAGTTTTGGATATATCTCACAACGTTCTCACTGGAAACCTTAATAATC TCGCCGGATTGCAAAATCTCGTGGTACTCAATATCTCGTACAACAAATTCTCCGGTCGCATTCCAGAAACAACTTTCTTCACGAAGCTTCCCCTGAGCGT ACTCGCCGGGAACCCCTCGCTGTGCTTCGCCGGAAACCAATGCGCCGGCGATGGAAACGGAAAATCAAGGAAGCGCGCGAAGGAGGCGCGTGTAGCCATG GTGGTCCTGCTATGCATCGCTTGCACGCTTCTCTTGGCGGCACTGTACGTCGCCGTCTCGGCAAAACGACGAGGGGTCGGAGAAAACGACATCGAAATGG ATGGAAAAGATAGTGACGTGGACATGGCCCCACCATGGGAAGTGACGCTGTACCAGAAACTCGACTTGTCAATTTCTGACGTGGCAAAATGTCTCTCTGC TAGCAACGTCATAGGGCAGGGTCGATCCGGCGTCGTTTACAAAGCGAACATGGCAGCGACAGGGTTAACTATCGCAGTGAAGAAGTTTAAGTCATCAGAG AAATTCTCTGCGGCGTCGTTTTCATCGGAGATTGCCACGCTGGCACGAATCCGTCACAGGAATATTGTGCGGCTTTTGGGTTGGGGTGCTAACAGGAGAA CCAAGTTACTGTTCTATGATTACTTACCCAACGGTAATTTGGACACGCTGTTACACGAGGGGTGCACAGGTTTAATCGAGTGGGAGACGCGGTTCAAGAT AGCATTGGGCGTGGCTGAGGGAGTGGCTTACTTGCACCACGATTGCGTCCCTGCTATCTTGCACCGGGACGTGAAAGCGATGAATATTTTGTTAGGAGAT AGATATGAACCGTGTTTGGCTGATTTTGGATTCGCTCGGTTCGTAGAAGAAGATCACGCTTCGTTTTCCGTTAACCCACAGTTCGCTGGTTCTTACGGCT ACATTGCTCCTGAGTATGCTTGCATGCTTAAGATCACAGAGAAGAGTGATGTGTACAGTTTCGGGGTGGTCCTACTAGAGATAATAACAGGGAAAAGACC TTGTGATCCATCATTTCCTGAAGGGCAACATGTTATTCAATGGGTCAGGGAGCACTTAAAGAGCAAGAAGGACCCAATTGAGGTGCTGGATCCCAAGCTT CAGGGCCATCCAGACACGCAAATACAAGAAATGTTACAAGCACTTGGTATTTCTCTTCTATGTACAAGTAATCGTGCTGATGATAGACCCACAATGAAAG ATGTTGCAGCATTATTAAGAGAAATTAGACATGATCCTCCACCAGGGTCTGAATCCAACAAGCTTAAAAGGACTGAAGCTTCATCCTATTCATCTTCCTC AATTACTCCGGCTCAGTTGTTGCTCCTCCAATCCGCTTCTCATTCGTCATCATTCACTTATTCATCTTCCTCCGCAGCAGCCTATCACCCACCAAGGAAT CAATCATGAATAATTGAAGATTGAAATCCTATGTTTATTTCAGAAAAATATGTTAATTACTACGTTTGAGGACTTAGATATGTTAGTTAGTTAGATATTT TGTTGATTTGTTAGTTAGTACCAGTAATTAACCATAGTGTACTGTTCCTGGGAATTTGTAAAGGCACTTCGGGTATTCTTATTCATAACAAGATAAAAGC AAATTGGGATGAGTGTACAGCAGCTTAATCAATTCACACTATTTCTTGTCC
• Tissue: pods
• Gene name: LI_gene_146109;
• Additional information: details;

Expression of Ll_transcript_435478

FPKM

• PAB: 0
• PNAB: 1.6
• PS1: 0.4
• PS2: 0.3
• PS3: 0.1
• PW1: 0.3
• PW2: 1.4
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435478

• Blastp: LRR receptor-like serine/threonine-protein kinase from Arabidopsis with 54.16% of identity
• Blastx: LRR receptor-like serine/threonine-protein kinase from Arabidopsis with 54.92% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT4G26540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464142.1)
• Pfam: Leucine rich repeat (PF13855.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;