Ll_transcript_385343

• Id Trinity: TRINITY_DN47255_c1_g1_i4
• Name Transcript: Ll_transcript_385343
• Sequence: AGACCATTGAAGTTGTGTGAAATGTCCAAAGCATCCTTATAATGTTCCCAACATGATCATAAATTCATAATGTCATTGTAAACATTTTGAGGGGCATTAT TGCATATTTAACTCCTAGACAGACCAAACCTTAATTCAAAAGCAAGACCAAATATAGAAGAAAATTATACAAGATCTCAAATTTGTAATGCTAACCATCA TATACTCATTATTCTGAAAAGGGAAGAAGAGACAATGCTACATGAAGAGAATGAGTCTGAGATTACATATCTCAAGAAAAAACTTGAAGTCCAAATGGGA AGAAATGAGTTACTGGAGAAAGAAAACCAGGAACTAAGACAAGAAGTATCTCACTTAAGGTCTCAAATAATTTCACTTAGAGCACAGAATATAGAGAGGA AAAGCACAATGTGGAATAAGATACAGAAATCCATAGATGAAAACAATCAAGATGCACAACAACATAAAACAACAATTCAGGTTGTTATGTCTGAAAAGAG TTCAGAAAATGAGAATGTGCATACAAATGAAAGATCAACAATAGTACCTAGTCCTCCACCGAGACCAGCTCCAACACCTCTTATTCATTCACATAAAAAT GAAAAAGGAGTTAAAGTTCAGTCAATGATTGCAGCAGCACCACCTCCCGTGCCACCAAAATCATCGGTTCGAGTAAAAGCAGTGCGCCGTGTGCCAGAAG TAATAGAATTGTATCGTTCTCTTACAAGAAAGGATGGCAACATGGAAAACAGAATGCATCTCAATGGAATTCCTGCAGTAGCATTTACAAGAAACATGAT TGAGGAAATCGAAAATCGCTCAACTTATCTCTCAGCTATAAAATCAGAAGTTCAAAGTCAAGGTAAATTTATCAGTTACTTAATTAAAGAGTTAGAGTCT GCATCATTTCAAGAAGTTTCTGAAGTGGAGGCATTTGTGAAATGGCTGGATGGTGAATTATCTTCATTGGTAGATGAAAGATCAGTGCTCAAGCATTTTC CTCAATGGCCTGAACAAAAAGTTGATGCGCTCCGCGAAGCTGCTTGTAACTACCGAGATCTAAGGAACCTTGAATCCGAAGTTTCATCATATGAGGACAA TCCTAAAGAGCCTTTGGCTCAGACTTTAAAAAGGATACAAGCAATGCAAGACAGATTGGAGAGAAGTATAAGCAGTAAAGAGAGGACAAGAGAGAGCACA AGCAAGAGATATAGGAATTTTCAAATCCCTTGGGAGTGGATGTTGGACACAGGCCTCATTGGTCAGATGAAGCTAAGTTCATTGAGGCTGGCAAGGGAAT TCATGAAAAGGATAACCAAGGAATTGGAGTGTTATGAAGCTTTGCAAGAAGATAACCTCTTAGTACAAGGAGTTAAGTTTGCATTCAGAGTACACCAGTT TGCAGGTGGCTTTGATGTAGAGACCATACAAGCATTTCAAGGATTGAAGAATATTGGGAGCACTATACCAAGCTATAGTGGTCTAATCAAATGCCCCACA GTTGTTAAAATTTGCCAGAAACCTGTATCTTAAATTGTCATCCACTATTGGGTTAGCAAAACATGTATAATACCCCCTATTTATATAATTTCTGAATGCA TTGCCAATCTTGACAGATTAGTTATATGTTTTTTATTATGCAAGGGAAATATGAGGATGATAATGAACCAAACAAACTCGATATTCAGGTTTGAAACTTG ACTCATTATTTAGTTTGATAAACTTCGTTAATGAACCAAAAGAGTCGAAC
• Tissue: pods
• Gene name: LI_gene_151150;
• Additional information: details;

Expression of Ll_transcript_385343

FPKM

• PAB: 0.3
• PNAB: 1.1
• PS1: 0.8
• PS2: 0.3
• PS3: 0.6
• PW1: 2.5
• PW2: 3.3
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_385343

• Blastp: Protein CHUP1, chloroplastic from Arabidopsis with 46.27% of identity
• Blastx: Protein CHUP1, chloroplastic from Arabidopsis with 46.21% of identity
• Eggnog: Chloroplast unusual positioning(ENOG4111F63)
• Kegg: Link to kegg annotations (AT3G25690)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417147.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;