Ll_transcript_477175

• Id Trinity: TRINITY_DN47484_c2_g1_i1
• Name Transcript: Ll_transcript_477175
• Sequence: GTATCAGCATGTTCTATTTGGATAGGGACACGAGAAGAACCCACTTGGTATTAAAAAAATAGAGAGATTTACATAACTCACTAGAATTAATCTTTCGAAA TTTGTGTACGGTGGAGTATCAAGTAGTATAATGCTGAATGAGAATATACATTCTTTTTTTCTCTTTTCAAATATTACCAACAAACCTGATATGAACACTG CAAATTGGTCTGCGTGGAAATGACATATAATTGTTGGATTGTGAAACCCTAATTCCCAATTGAATGGAGGAAGAGGGTGTAATAGAGTCTTCAATTCCAG ATGCAAGTGAATGTGATGTCTCAATTCCAAGGGGTGGACCCATTTATGTTCCTAACATGCTTTCTCCTTCCACTACCCTCAACCATTTTCACTCTTCTCT TCTCTATCAACTTCAGGATATAGAAGCAGAGCTACTTAATCATCTTCATCATGAACATGAACATGAAAATGATCTCTCCGTTCATGACCTTAAACTATTC ACAGACCATGACTTAATGGATATGGCTTTGAAGCAACTCTTTCATGACAGGGACAACAACAGCAACAACAACAACAACAACAACAACGAAAATCAGCCAC CACTTTTGGACCAATCCAATGCCAACAACTCTACAACAAAGAGAAAGAGAAAGACAAGAGGATCAAATAATGCCATTCTTCAAAGTGATTGTCTAGAAAA GGCGGAGCAAATTGTGAGAATTAAACATAAGCAGGAAGAAGACAAGGAGGCAGTCAGACTTAATTCATTTAATCCTGCTTGCAAGATCACTGAATCAGCT CAAAGTTCTACAAGAGTGGAAAGGATGAGATCCCTTAGGTCTACGAGTTCCATTAGAAAGGTCAACACAGTGAACCTTCAGGAACAGATACCTGTGCAGC ATCCAGAGGTTGTTCTATCTGTTGAAGTTTACCATAATGTTCGAAAGCGTGTCAAGGTATCCAGTGCCATGCTGATTTAATGACAACAAAATTAGTATCC AACTTCTGATCAACCATAAAATAGGTAACAAGCTGGACGTCTCTGCTTTTTGTTTTGGTAGACCCAGGAGTTGTTAGTTCTTGGAGGACAAACTCTTAGT GCTTTAAGGGACAAGATCTATTGCTCAATGGACCATGTGATGCAAAAAGCTGGGCAGGGCGACCCTTCTGGTTATTTTCTCATTGAAGATGTATTCTACA ATGATTTGAGGGATCCATCTGCTATTGATTATTCCAGACCTATACTGGATTGGCTTCAAAACTCCAAGGAGGAGGTACAAAAGAAATGGGAATATATTAT GAA
• Tissue: pods
• Gene name: LI_gene_153031;
• Additional information: details;

Expression of Ll_transcript_477175

FPKM

• PAB: 0.5
• PNAB: 0.3
• PS1: 0.5
• PS2: 0.7
• PS3: 0.8
• PW1: 0.6
• PW2: 0.9
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_477175

• Blastp: snRNA-activating protein complex subunit from Arabidopsis with 34% of identity
• Blastx: snRNA-activating protein complex subunit from Arabidopsis with 37.74% of identity
• Eggnog: small nuclear RNA activating complex, polypeptide 3(ENOG411090A)
• Kegg: Link to kegg annotations (AT1G28560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426809.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;