Id Trinity | TRINITY_DN48032_c5_g1_i4 |
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Name Transcript | Ll_transcript_327121 |
Sequence | GAGTAAAATAAAATGAAAGTTAGTCCAATTTCTAGAGAAGAGGGAGACCAAGAAAAACTATAAGCAAAATGACTGGGAAATATTTAGAGTTCAATGTTTC GTCAATGGACATGATTTATGGTAGACCATGTGGTGGGTCGTTCAGTCCATGTAGCTGACCTAACCTAATGGGACTAAGACTTAGTTGTTGTTTTGGTTGT CCAGAAAACAATATCAGTAAGAGGAAGTGTAGTGACCCGTTTCATTTTTCAAATTAAATTGCTTTTGTTAGACGAAGTTTTTGATGGAGAGGGGGAATTG TGTAGCTGCCGAGGTTTGAACCATGATGTTCACACTTTATGTTCCACACCTTTACCACCCGAACTGAGTTGACTGACTCTTGGTGGCAGATTAATCTATT TTTTATTTCTTGAATTTTTATCATGGATAGTTCGATAGTGTGATATTTCGGGCTTAATTATCACAGGTGGAAAATATTTTTCATTATGATTCCTCAGCGA CCAATTGAGCTTCTGCAGCTTCTGATGTTCTTCCATGGAAATTCATTTGATTTTTATTTGTTTGTTACAGACATACAGGACAGACCCTTTAAAGTTAAAT GCTATAGAACAGGAAGGTGCAGGAAAATTAGAAGAGCCAAAGCAAGTTGTTTATGAAGAAAAAGATTTTGGTTCTAGAGGTAATACCAGTGCTGAAAAGA TTAATGATTCTGTGGAATCTAGACATGAAGTGCACAGAAACATATTTTTGGAAAGAAATGAATCCCAACATGACAAAGGACAAGACCAGGTAGCTCAGCA TAAAGGATTATCCTCCTTGGATGGAGATAAGAAGAAAGTTAATACAACAGCCATGCACAATCAGAATATGCACACTCGTTCTGAAAGAATGGTAGATGGT AACATCGAAATGGTAGATAAGCAATCTGGTAAGAAAAAAACCCAACATCAGATTTCACGCTCTCGGCCTCGTAAAGTGGGAAATCAGAAGGTTGAGGAGA TTAGGGATCAAATTATTAGAGCCAGGGCATACTTGAGCTTTATTCCAGCAAGCAGGAACTCACCCCTGGCGAAGGAGTTGAAGCTGCGAATTAAAGAGAT GGGGCGTGCAGTTAGAGAAGCTACAAAGGATTCAGATCTGTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCATTGTCTAAAGCTCACCGT GCTTTCCCAGACTGCACTGCTATGGCTACTAAGCTCCGTGCAATGAATCATAATGCTGAAGAGCAAGTTAGGACTCAGCGATACCAAACATCATATCTTG TTCATCTTGCTGCAAGGACCACACCGAAAGGTTTCCACTGTCTTTCTATGCGGCTGACTACTGATTACTTCTCTCTGAGGCCCGAGGAGAGGAAGTTTCC AAATGAAAATAAGATTCATGATCCAAAACTTCATCATTATGCAGTATTCTCAGACAATATTCTGGCGTGTGCAGTGGTTGTAAACTCCACTGTCTTTACT GCCAAGGAACCGGAGAAACTTGTTTTGCATGTATTGACCAATCCACTCAACTTTCCAGCAATCTCGATGTGGTTCTTATTAAACCCTCCTGGAAAAGCCA CCATCCACATACAGAACATAGACAACATTAAATGGTTGCCCAAGGACAATACCTTCAAGAAACTTAATTCCAGCGATCCAAGATATACATCCGAGTTGAA CTACTTGCGTTTCTACCTGCCAGACATCTTCCCAACTCTAAATAAGATCGTGCTCTTTGATCACGATGTGGTGGTGCAACGAGATCTCAGTAGACTATGG GATGTCAATATGAATGGAAAAGTCATTGCAGCAGTTGGGACATGTAAGGAAGGTGAAACTCCATTTCATAGGATGGATATGTTCATAAACTTCTCAGATC CATTCAATGCAAAGAGGTTTGATGTCAATGCTTGCACATGGGCGTTTGGGATGAACTTGTTTGATTTGCAAAAGTGGAGGAGACATAATTTAACTGCTGT TTATCACAAATATTTGCAAATGGTATGTTAAAGAAACACCTTTACTTTGTTGCAGGCTTTTCTTTTCTTGGTTCACAGAGTAACTAGTTTTATTCCCCCA ACAATTTTTCTTGCATTTAAATGTCATTAAACCTCCAGCTTGACTCTTCGCATTGAAAAAGTAATGAGGTTACAATGCTTTATTTTCATCTGTTTCCTTG AAATTGCCTTGTATTACTAGTGGGCAATTTTCTTTCGCATTAGAATGCTTAAGGTAGTAGTTTATGACTTCTTAAAATGATTTTTTTTACCTCGTTAATA TTTGTATAAGATCAAAGATTTGAACATCCCATGGCATATTCAGGGTTATTCTAACTGGTGTTTTCATATTTATAATTTTGGTGGTTGTATATGATAATTC GGGAATACGTCTAAGCTCTAGTTCAAATTGAAATTAATAGAGCAGGTATAAGCTTGTGATACAATTATAATCTAATGTGTTTATATGGGTTTATAATTGC AGGGTTTTGAGAGGCCATTGTGGAACATTGGCAGTCTGCCTCTAGGCTTGGTTACATTCTATAACAAGACAAAGTTTTTGGACAGACGGTGGCATGTTCT TGGGCTTGGTTTCAATTCCGAGGTCGAAAGAAATGTGATTGAAGGTGCTGCCGTTATACACTACAATGGAATTAGGAAGCCATGGTTGGATATTGCAATG GGAAGATATAAGAATTATTGGACCAAATTTTTAAAGTTTGATCATCCTCTTCTGCAACGCTGCAATCTCCAGGTGTAGCCCAAAATCTGAATATGAAGGT TTTAAATTGTGGTTGTGGATGCAACACAATTTGATTATGCAATCACAATTACAATTGCAACGCGGTTGCAGAGATTATGAAAAGCACAATATTCTGGCCC TTGATTGCGATCGCGATTGCGGATCTTATTTGAAATATTCTTGTACCTGGTATGTGTTGTTTAATTAGTTTGATCTCAGTCGATTCTTTGTTGTTTTTGG GAATTGTTCTTGTAAAGCTCTTCACTCACAGCTCCTCAAAATTTCTATACATACTTTTTTTAGAAGGTTAGCTAATCTGTAGTGACATTTAAAATGAAAT GAATAATAATAATAATAATAATAATAACAAGCCATTTTAGCTTTAGAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_157611; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327121
Blastp | Probable galacturonosyltransferase 6 from Arabidopsis with 49.07% of identity |
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Blastx | Probable galacturonosyltransferase 6 from Arabidopsis with 49.07% of identity |
Eggnog | Galacturonosyltransferase(ENOG410YA0P) |
Kegg | Link to kegg annotations (AT1G06780) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456475.1) |
Pfam | Glycosyl transferase family 8 (PF01501.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |