| Id Trinity | TRINITY_DN48050_c5_g6_i1 |
|---|---|
| Name Transcript | Ll_transcript_325758 |
| Sequence | GGCTTATTTGCACCTACTGTGTAGAAAAGGCAGAAACACGTTTCTCCTATAAACAGAAAAAGATTATGACTCACCCCAACCTACCTAAAGAGATAGGACA TAAATCTCATATATTTAGAGGCACTGATGACATGCCACCGAAAATTGAAGTATCCCATGTGTTAACTCCATTATCACAATAATAGCAACCATATTATTGC TCAATCACCACACTACAAAAGCCTTTCCACCACTTCAAACTTCCACCTACAAAACACTTGCCCAAGTTGTTTCTTCAAGTTTCAGTTTGGAAGAGAACAA ATATGTCTTCTTTTTAATAAAGATGTCTCTGCATAGAGATATCTCTTTCTTCTGTTCCTTGGATTTTTTCATACTTGGCCTAAGGGAGAAAAGGGGTCAG GGATTCTATACAAGTATTGAGAGTTTGAGAGTTGATATCTTATTATAAAGATCATATCTTTGTAGTAGCAGAAGCCAGAAGGTTTCAGCTGAAAGAAATA AAAATAGATAGATGACAATACTATGTGGTTCAGTTTTGAAGGACAACTATGATAACAGTATATGACAAAGGTAGAGGAAAACCAAGAAATAGAACTAGTA CATATGCTATGCAATAAGTCCATGGATGAATTACCTGGCTCTGTGGGCACTAGTGCCAGCTTCAGTCTGAGATTGGGCCAGACCATATTCTCTTCTTCTT CCCTTCTCTTTATGTCTTTTGGTGTTGAATTCTACAGCTACACAGCTTTCTGCTATTTGGTAACAGTGATGGGTTTGGTGATACCTTGGAGTTTCACATT AGCACTGGTAGATGGATACTCAGTTCTGGTAAAATGCCCCATTCGCCAACCAGGAATACTGCTGATTATTTTTGTTGGAGATTGGGTATTATCAACTCTC ACATTATCTGCAGCTTGCTCAGCAGCTAGTGTTGTAGATCTGCTGCTACAGTCTCATGGACCCTTTTGTCCTCCAAAACTTTGCAGCAGATATAAGATAT CTGCAATTATGGCCTTTTTTTCTTGGCTTCTATCTTTGGCATCCTCTCTGTTTAACCTTTGGCTATTACCCTCTTTGTGATTCTCATTTAATTACCTTGT AGAGTGCTAAAGATTTCACATCATTTATTCTGTAAATTAGTTTTTTTTGTTTTGTCAATTATAGCATGAGAATCCTGGGGATGTCCAAAATATTTGGTAA AAGTCTTATAATTTTGTTCAAAGCATGTAGAGATACTCAATATTAAAGTGTACATAGGATGGCAATTGGTAATGATGTCAATTTAAAACAGGGCACTTCC ATGAAAAACCGGAGTTAGGCTCTTCTATATTACATGAGAGACAAGTGTCACACAATAACAAATAAAAGATATGTAATAAACTTTTATCATTTTATTAATC ATGAAATAGAAACAAATTTTGTATTATGGAGAGGATCCTTTTTCGAAAAACTGATGGTAACTATAATAAGACTTATCACTTAGGTAATTTATAGGAGTCA CATCTTCTGTCCCAAAGTTTGTACCACTAATGTACCCCATGTTTTTTATTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_157772; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_325758
| Blastp | CASP-like protein 5C1 from Oryza sativa with 64.96% of identity |
|---|---|
| Blastx | CASP-like protein 5C1 from Oryza sativa with 65.22% of identity |
| Eggnog | CASP-like protein(ENOG410YMN0) |
| Kegg | Link to kegg annotations (4334238) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019412871.1) |
| Pfam | Domain of unknown function (DUF588) (PF04535.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |