Ll_transcript_420978

• Id Trinity: TRINITY_DN48701_c0_g1_i1
• Name Transcript: Ll_transcript_420978
• Sequence: CAGCGATCCTCGACTTCACTCGCAAGTCGCAACCATACTGTTTCACTCACTAACCCGTTTTGACACAGCGCCGCCAATAGTTCACTTTCATTCAGTCAAA GCTTCTCGTTTCAATCTCAACTAACAGCCATCCATGGCCTTCATCATCTCAAAGCTACGTTTGCACCACTCTCTCTTACCACACACTTTCAAACTCTACT CTTCTACTTCAACTCTAGTTTCAGACCCTCTTCTCCAACATGACTTAAACAACACCACTCAAAACACTAATCTATCAACACAAGAAGAAACAAACATAGT TGATAAATTCCACTCTCTCATTAAAGACCACTACAGCAAAAACCCTAACCCTAACCCTACCCCACCCTCCCCCAGCCACGTCATACCCGATCTCTCAATC GAATTCGCGAAGATCTCCACCGTTCATTCACTCACCCCCTCAATCGCACGCAGGGTCATAGAGAAATGCGGTGGGGTCCACCACGGAATCCCGTTTCTCC AATCATTGGGCTTTTTCAATTGGGCCACCACTCTCGACGGCTTCGCTTCCTCGCCTGAACCCTACAACGAGATGATCGACCTCGCCGGAAAGCTCAGGCA CTTCGAGTTAGCATGGAATTTGATCGATTTGATGAAAGCTCGCGGCGTTGGAATCACCATTGACACGTTCTCTGTCCTCGTCCGGCGATACGTGAGAGCT GGACTTGCTGCCGAGGCAGTGCACGCGTTTAATCGGATGGAGGAATATGGTTGTACACCTGATAAGGTTGCATTTTCAATTGTGATAAGTATGTTATGTA AGAAGAGGAGAGCGAGTGAGGCGCAATCGTTTTTCGATAGCCTTAAGGATAAGTTCGAGCCTGATGTTATAGTGTACACTAGCTTGGTTCATGGTTGGTG TCGCGCTGGTGATATATCAAAGGCTGAGGAGGTATTCAGGGATATGAAGATCGCGGGAATCAAGCCTAATGTTTATACTTATAGCATTGTGATTGACTCG CTGTGTCGATGTGGTCAGATTACTCGTGCACATGATGTTTTCGCGGAGATGATAGATGCGGGTTGTGATCCGAATGTGGTTACTTTTAATAGTTTAATGA GGGTTCATGTGAAGGCTAAGAAGACTGAAAAAGTTTTGCAGGTTTTTAATCAGATGAAGAGGCTCGGTTGTGATCCTGATACAATTAGCTATAATTTTCT AATTGAGTGTTATTGTAGAGATGGGAATCTCGACGAAGCTGTGAAGGTTCTTAATTTGATGGTTTTGAAAAGGGTTGATCCTAATGTGTCCACTTTCAAT TCAATTTTTGCACGCATTGCTAATTTACATGACGTTAATGGCGCTCATCGGATGTATGCTAAGATGAAGGAACTGAAGTGTCAGCCTAATACGTTGACGT ATAATATATTGATGAGAATGTTTGCTGACTCTAAATCAACTGATATGGTTCTGAAATTGAAGAAGGAAATGGATGAGAATCAAGTTGAACCTAATGTGAA TACATATCGAACTTTGATTATGTTGTATTGTGCAATGGGGCACTGGAACAATGCCTACAAGTTAATGAAGGAGATGGTAGTGGAGAAAGGCCTAAATCCA AATCTATCCGTTTACGAAATGGTTCTAGACCTGCTGAGGAAGGCAGGACAGCTTAAAATGCACGAGGAATTGGTGGATAAGATGGTTGCCCGGGGATTTG TCTCTCGCCCTATCTAGGAGAAGAATATGAGAACTTTCAAGTAGGACTATAAAATGATGGTATTATTTGACTGTTCAATAGTTGACACAAAAAAATTAAG CCTTAATTTATATTTTTTTATATTTAGAGGCTCCAATTCTTTCAATGTTTGTTAGGTGCTTAAGGTCTTGGATATTTTGTTAATTTGATTAAGTTTTGAT GGCCATGATATACTTTGATTTGCTGAAATTCTAGGTTTTCTTCTTAAAAGAAAATGTTACAAATGTTGTTTGATGTAGTTCATTGGGCCTGTAATTTAGG GGCACCAGTATCATTTTTGCTGGCCAGGGTATTCAATAGTGCTCTTGTTCTCTAATTGCAAGTTTGCGAGGGTGAGCCACGGCGCAATGACAATGTTATT GTTTAGTGACCAAGAGGTCACAATTCAGATTCTGGAACCAACCTCTCCGCCTATGGGGTAAGGCATGTACCCTTCCATACTACACTAGGTCAGAACCACT TGCATTGAACACTTGAACCCATCCTATATATCTTCTCGTAGTGCTAAATTTTGGTTTAGAAGCTATAGGAAGATAAACTGAAAGAAAAATGTACCTTATC AAGTTTTGGCATGTTCCAATGAGATTGATATCTTGCTTGCATATAGGTATTGGTAATGTTATCAGTGACTCTGTAATGTGAACTAGTCCACCAACCTTTT CCCAAATTCTGTGCTGCCCATATTTTGATAGTGATTGACAAATGCCCG
• Tissue: pods
• Gene name: LI_gene_163358;
• Additional information: details;

Expression of Ll_transcript_420978

FPKM

• PAB: 1.4
• PNAB: 4.8
• PS1: 5.2
• PS2: 2.5
• PS3: 3.5
• PW1: 2.9
• PW2: 3.1
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_420978

• Blastp: Pentatricopeptide repeat-containing protein At1g20300, mitochondrial from Arabidopsis with 65.31% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g20300, mitochondrial from Arabidopsis with 64.02% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G20300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438067.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;