Ll_transcript_419699

• Id Trinity: TRINITY_DN48765_c0_g3_i1
• Name Transcript: Ll_transcript_419699
• Sequence: CACAAACCTCTCATCTTCTATACACAAGAAACAACCCCAATAGGATAAGCACTATTCAACTATTCATTCCCTTCTCCTGAAAAAACCCAACACCTCTTTC TACATCACACACACACACACACCTAAAATCTCACCCACTTTCACTTTCAACCTTTCATCTTGGAACCCCTCACCTTAGAGGTAAAACCAGTTCTTATCTA GTTCATGAAGGTTTAAGTAGTAAATAGTCACTGTTTAGATTTGGGTAGTAGCAATAATGGATTTTGTAGCACCCCATGAACAGTTTTGTTCATTTCACAA TATCCATATAGATTCTACAAGAACCTATAGAGGTAGGGTTTTGGATAACACTGTTTCTCGCCCTTTCATTCTATCTGCTGATAGTGCTGTGCACTTGAGA AAACTGAATGGGTCCAGGTCTAGGAAGCATTTAGGCAACCGTGTTTTCGCGGTTTCGAAGTTTGAAACTTCTGGTTTGAATGGTAAGTTGCAGCATTTTG GAAGAACTTCCCCAAATGGGGATTTGAATGTTGTGGAGTCATCCCATAACGGGGTCAATGGTTTGCGAAATTTCGAGGAGTTCGAGTGTAATAATCATCT TAGGAAGTTGGTTAGGAATGGGGAATTGGAAGAGGGGTTTAAGTTTCTGGAGCGTATGAGTTATCAAGGTGATATCCCTGATGTCATTGCTTGCACTACT CTGATTCGTGGGTTTTGTAGGAATGGCTGGACTAAGAAAGCGACTCGAATCATGGACATTCTGGAGAATTCCGGTGCTTTACCTGATGTGATAACTTACA ATGTTTTGATTAGTGGATACTGCAAATCAGGGGAGATAGATAAAGCTTTGCAGGTTTTGGAACGCATGAGTGTTGCTCCGGATGTTGTTACTTATAACAC GATTCTGCGTACTTTGTGTGATAGTGGGAAATTGAAGCAGGCAATGGAAGTTCTTGACAGACAGTTGCAAAGGGAGTGTTATCCCGATGTAATTACTTAC ACTATATTGATTGAAGCTACTTGCAAAGAAAGTGGAGTTGGCCAGGCAATGAAGCTGTTAGATGAGATGAGGAGCAAAGGATGCCAACCCGATGTTGTTA CGTTTAATGTTCTTATCAACGGGATTTGCAAGGAAGGTAGGTTGGATGAAGCTATTAAATTTTTAAATAACATGCCGTCCTACGGTTGTCAACCGAATGT CGTCACCCATAATATTATTTTGCGAAGCATGTGTAGCACCGGGAGATGGATGGATGCTGAGAGGCTGTTAGCTGACATGCTTAGCAAGGGTTGTTCCCCC AGTGTTGTTACTTTCAATATCTTGATTAACTTCCTGTGTCGGAGAGGTTTACTCGGCAGAGCCATCGATGTCTTGGAGAAGATGCCAAAGCATGGTTGTA CTCCGAATTCCTTGAGTTACAATCCCTTGCTTCACGCCTTCTGTAAGGAAAAGAAGATGGATAGAGCTATTGAGTACTTGGAAATAATGGCATCTAGGGG TTGTTACCCGGATATAGTGACCTATAATACTTTACTCACAGCATTATGCAAAGATGGGAAGGTTGATGTTGCAGTTGAGATACTGAATCAACTAGGTAGC AAGGGGTGTTCTCCCGTTTTAATTACCTATAATACAGTTATTGATGGACTTTCAAAGACGGGTAAATCAGACCGTGCTGTGGAACTATTTGAAGAGATGT GCCGAAAGGGTCTTAAACCCGATACAATTACATACTCTTCACTGCTTGGGGGTATCTGCCGCGAAGGAAGGGTTGAGGAGGCTATCGAAATTTTCCATGA CATGGAAGGATCAGGTATCAGGCCCAGTGCTGCTACTTACAACTCAATCATGTTAGGACTGTGTAAGGCTCAGCAAACCGGTCGTGCTATCGATTTTCTG GCTTATATGATAGCAAATGGATGTAAACCTACTGAAGCTACATATACCATTCTTATAGAAGGCATTGCCTTTGAAGGATTAGCTGAGGAAGCATTGGAGT TGTTGAATGAGTTGTGCTCCAAAGGATTTATGAATAAAAGTTCGGCTGAAAAGGTAGCAGTTAAGTAGAATAAAATGCATTTTTTGTCTTATACAAGTCT GTGTAATATTTATGCACTTAGATTTTGTTAACCCCTTTATGTCAGCAATGACTTATTGGTCTGGCTTTTGGTCCTTTGGATCATTATTTTGAGGAAGGAC AGTTTTGATAAACTACTTACCAATTAAATATTTTTCAAAAAAAAATGATAATTTCTTTGGTCTTTTGGATCATCTGTAAGTGAAACAATGCATGATATTA GAAAAAGTGAGACAAGCCATTTTAACATAACATAACATAGCCTCAAGACAATGATTCTATAAGTATTATTACATACCACTCAAACTATTTCACTTGTGAA ACTTCTTGCTTGTTACTTACTTTTCACTTGAATGTTACTTAAGAAAAAAGTAGTAAAAGTAATCAATGATACATGTTTAGGATTGATATTTTGCAAACAA TCCTAGAATGAAGGGTCTAAATAAGGCACTTAAATTAAAACAACCTAACCAACTAATATTTACAGTATTATTTGAATTCCTCTCCCCAGCTTCTTACTAT AGAAAAGTTGAAATAAATCAAAACACAGGGTACTCTGTAACATTTATACCTTTTGCTGTTGGATACTATCAATTCACTGTGTTAGCTGAAGGCATGATTG CAGTTGCTCCAAGAAGTACAGGAAGGTGAATTGATAGTATCCATTTCTGTTTAGGAAAAGCTTTGTGAAATAACCATACAATTCCTGGTCCATTGCTCCA ACAAAGAAGAACAAATTGAGTTGTGGGTATCGACGGATGTTGGTTCAAGTGGTATATGTTTGATTCCTCTTAAGGAAG
• Tissue: pods
• Gene name: LI_gene_163826;
• Additional information: details;

Expression of Ll_transcript_419699

FPKM

• PAB: 0.5
• PNAB: 4.4
• PS1: 2.2
• PS2: 2.3
• PS3: 2.2
• PW1: 2.3
• PW2: 2.3
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_419699

• Blastp: Pentatricopeptide repeat-containing protein At1g09900 from Arabidopsis with 71.4% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g09900 from Arabidopsis with 71.4% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G09900)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417440.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;