| Id Trinity | TRINITY_DN49449_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_354132 |
| Sequence | AAACAAGTGAAGTAAGAATCTTTTCCTACACGTTCACGAGCATCACAGAACGAGTAAGGAACACGTATATTTATTTCTCTATCTTCATTCCCACAAGTCT TCAAAACCATCACCAAACCAAACACCCCTTAATAATACAATTGCACTTCACTTCTTCATTTCACAACTATACTCTTAGGTAATACTCCACAAACCCATTC ATTCCCAAACTTGTTATCACTCATTTTATAACAATGGCTTCTTCCCTTCTTCTCCTTCCAATTCTCCTTACTGCATTAACATTGCCATTACCATTGCTGG TTTCTGCCGACAACGGTAAATGGCAGCTTCTACAGAAAAGCATAGGAATAGTGGCCATGCACATGCAATTACTACACAATGACCGTGTTGTTATTTACGA CCGCACCGATTTCGGGTTCTCTAATTTATCTTTACCCAATGGAAGGTGTCGCCATGATGATAAAGAGCTTGCTGTGAAAACGGACTGCACCGCGCACTCT GTTGAATACGACGTCGCATCGAATAGATTCAGAGCATTGTTTATCCAAACTAATGTTTGGTGCTCCTCGGGTTCAGTTTCTCCTAATGGGACTTTGGTTC AGACCGGTGGTTTCAACGATGGAGAACGTAAAGTTAGGACATATAGTCCTTGTCCCACATGTGACTGGCAAGAACTTGAAAATGGACTCGTTGCACGAAG ATGGTAATGTTTATAATTGTGAGTTACAGTCAACTATATGATTTCTTGTTTTGATAAAAATGGGATAATTTATCACTCATTTCAACAAGGATCTAACTTT TTTTAGTTTTGGATTTGGATAGACAAGAGTATCACATTTCTCAAAAAACTAGATTTCTCTTCATTACTCAATGAAGCAATTACACAAATAAAATTTAACA ATCTATTAAATAATTACATTTTTATCTTTTAACTTATAACAATATTACCTTTTTACCATTAAAATTATACTAAAAAGGATAATTGGCCTCTCAATTACTG AAGAGGAGGCTGACTCCGTATGGAATAGTAGGTAGCATAGTGCTATAAAGGATAAACTCTCACTATGTGCATTGTGTAGGGAAGGGTTGGACCCATTTTA TGGCTCTGTATTAGGCAGCCTTACCTTTTGTTGATACGAGATTGAGTTCACCTATGATCTCATTGACTTGTGGATTGTATAGCGACCACTCCCATCTGTT GCACAAAGACCATTATGGGGTCTAGAAAAATTCTTAAAATATGCCAGTGTTTCAAACCATTGAGAAATTAATTTGATGTGTGCCTTTTTCCCTTGGTCAA TCCTTTTCTCACTCATTTCTTCTGGATCTCACCTTTTGTGTTTACATTGTTTTTATTTTAAAAATTAGCAGAGGTAAGAAGTATTTTGACCTTTTACATT TCTATTCTGAGTGTGGAGATCCTTGCAAGAGAAACTTAACGACATCATATCTACTTTATGATAGATGGACTCTGGCCTGATTATAACAATGGAACCTGGC CAGCGTGTTGCACTAAATCTTCTTTCGATCCAAATGCGATATCAACATTGACTGATGCTTTAGAGCAATATTGGCCATCATTAAGCTGTAGGGAAGCACC ATCATGCCATGGTGGGAAAGGTTCATTTTGGGGTCATGAGGGGCTACCACATCGGTTCGCATTTGCAGTGGGAGAAGCATGGGACATGCGCATCACCTGT GGTTAGCAACGAATATGATTATTTCCTGACAGCGCTGAACGTCTATTTCAAATATAATGTCACAAAAGTTTTAAATGAAGCTGGATATGTTCCATCTAAC TCAGAAAAGTATCCCATCGGAGGCATTATTTCTGCCATTGAGAATGCTTTTCATGCATCTCCTCAAATTGTTTGCTCAAGAGGTGCTGTGGAGGAACTTC GTCTGTGCTTTTATAAGGACTTCACGGTTGGAAATCTACCTTTGCTCTGTAATATATTCAGCATATAAGAAACTAAAAGACGTTGTTCAAACATTTGCTT TATTCACCATTGAGATTTAGATACCAGTTGGCATTGTTAAGAACTAAATAATTTAGTCTGTGGTAATTGGTCAATTACTGATATGACTATTGTACTTCCT GCTCATATTTAAGGCAACACTGAAAAAGATTCATGAGTTATAATTGTGAGATAACTAAGCTGTTTTCTACCTGTAGGATAGTGGCATTTAATTCGAAACT TATAAATTCTGTGCAAATTTGGTTTAATTTTACAAAATGTAGGAAAAGCCACACTGTACTGTAGAATGTATTACTGATTATGATAGAATCTCCATGACCT TGTACTCTGCAGGGTACTCTATTCAAACCCAATATTTTGGCAAGCATAATTATTTTAGCACATTGTCCTTTTTTTGCAGCCACGAGATTGTGCTGTTGGA CCTGACAATAAAATTGACATCGTCGCTTCAAAAGGATCATGTCCCCAATATGTTAGCTTGCCGGAACTTGCATCGCCAGGTTAGTTCACTGTTGTTCTAT CTTTACACCAGTATAGCTATATTTCTATTTCGTAATATTATAGTAGATTGCTAAAAGTTACACATAAGTGGTCTTGTTGGATTAACATTGAAGGAAGAAA CTGGTCTGGGGTCAATTCCAGACCCACTAAGATTTACAAATGATGTGTGCCTGGTCAAAATCCTGTTGTACGTTGTGAGTATATCTGAAGCTAGTTTACC TGAGGCCACATAGAGGCACCAAGTTGGTTCAAATACCTATTTCACTATTAATACTTGGTTCAACACCACGTGCGGGGATTGATTTATCTGTATCCCTATT TTTCAAATCGATTTATTCGTGTCGCCAGTAATGACATTTATACTTCAACATGCTGATTCTGACTTGACTTATATACATGATTCTTTGTCATTTTCATCAT TTGAACAATAAGCTTTATATCATTTTGTCACAAGCATTCTAGGCATCTGTATCACTGAGAAAGAGTCAAAGAATAATTTTCCTTTTCCTGACAGAAGAAA TTCATAAGATAAAAAAGATGCACAATTGTGAATATGATAAGAAATTTACCATATAAGACTACAACAACAAAACCTAAATTTAGGGGTGTGGGTGGGGACT AAGTATTAAGCAACTCTTCCCAATCTTTGGAAACCCAAGAGCATAACACCATTCCAGCAGTCATGATTTGAGCATAACACCAGAGTCCAAAAACTATCTT GGGGCAAAGAAATCTTTTTAAAGATATGATTGTTTCTCTCTAACTATACCATGGTCCTTGCCCTCTCTCCTAGAGCACCTGGCAGAAAAAGTCCAAATTG TGCACTGAGGTTTGTACCTGTGATCTTTGCAAATGACTTTTAGCTGCAACATTGAGTATTGTGAAAGTTACTTGAGTTTGGTACACACGTACAAGATTGT AACTGGCATCACGTGTTACTCATCTGAGTTTCATGCCTTATGTTTTGCGTCATTTGATACCTTTCATAACATGTGGAAGAGTATCTAGAAATTGAAAATT GGATATTTTAAATTTGCTCAGTGGCTGCTAAACATGGGCATAATACATGCTTAGAAGAATATGGTACAGACAATGTGTGTTCCAAACACGAAAATCGTAA ATATCCATGCATCTTTTAGTTTTCTAGGATTCAAAGATGGTGTTTATTGTATGACTTAGCCGCTGTTGACTTGGCTTCAGCTCTGGTAGTCCATAATTCG GTAATCTAGTGCTATTTTATGGCTGTCTAATTTATCATGGCCAATTGTTAAGTTTTCGCTTAGTTGATGCGTTGATAGAACTTCCCTTTGATTTAGAACA AAATATGTAATGTGATAGATTACTCTTTCCCGAAAAATTTGTTGATCTGTTGAGAGTAGCCCAACATTGTGTAAGACAATTATCGACTGCATTTTATTAA TATTATAAAAATCTTTGCATCTGTAGGACGTGATGAACTTCAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_169467; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354132
| Blastp | Aldehyde oxidase GLOX from Vitis with 44.78% of identity |
|---|---|
| Blastx | Ribonuclease 2 from Arabidopsis with 67.44% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458830.1) |
| Pfam | Glyoxal oxidase N-terminus (PF07250.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |