| Id Trinity | TRINITY_DN49829_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_343086 |
| Sequence | CAGCGGATCCTTTGTTGTTTGGTTGGTTTGCGTAGCATAGCAGGGCAACGCAGGAAAGAAGTGGAGGCTATACATCACTGTTCCCTTTTTCTTTATTTCA TTCATTCAAAGTGGTCTGAATCTCTTATGCATATTTGTCCCCGGATTCCACTAGACGGAAAAAAATTCTATCACTCTGGCCGCTTTTACAAATTCAAATT GTTCTCGCACCTCCAGAAGGGTGTGGGGCGATGATGAAGAGGGAGTGATTCTACTTTGTGTTTGTCAAAGATCGATATCATCAGACATATGGAGACTGTG TCGTGTTTCAGTTGGTCTGTCGCTTGATTATGGCTAAGGGAGCCTCTTGTTGTATCTCCATAAGCTATTTCTAATTTCAAACTAAATCTCCATAAATTTA GCGTCTTTGATTAGGCTTCTAGGAAAATTGATGAGCAATATGGATTGTTGTTGACATTATTTTTTATGCCATAAAGAAAGTTTCTTGATTAGAGATAGTG TAGTTCTCAAGTCTCAACATCATTGCAGCAATGTTTAGGTTTTCTAGTTTCCAAGCTCAACTCCAAAATAACAAGCAAAAGAAAACAGTACAGTCTTCTT CTGAAGTAATTGCAAAGGCTATGCAAGATGATTTGCGAACGCAAGTATATAATGATTTATCCTATATGAATAGAAGCTCAAATCCACATCCCTTGAAAGG ACAAGTACACAGACAAATGAATATCAATGGGAATCACATTAGCGATCGGGATTCAGTTGAGCACATTTGTAGGTCAGCGGATCTGGATAGCAAATTTTCA TTTGAAAGTCAGGTAGAAGTTCAACAAACCAGGCTTCTTAAAAAAAGTCATTCTGTTGCAAGTGGACTTCACCTAAAGGAAAGCCTATATACTAACCGCA TAACCGAGTATGATGCAGATTCGACTTTTTCTTTTAATGGTTCCAAAAGCCACAATGATTCGCCAGTTTCAGGTTGCGGACAAGATCATGACATTATCCC CATTGATCACTGTAAAAAGAATCAAAACCCTGAGTTTCAAGTTAGTTCAGCTCTTGCAAATGAAGACTTAATTTTTTCAGTAGGAGATCTGACAGCTTCC AATAAGGATGCTCTTGAAATTTCTGATACTCCATTATCTGGTGAGTTTGCTGGTGATTCTGCTGAGCAAACTTCTGGTCCCAGTACACCATCTTTATTGA AGTCACATTCTTTACCCGATTTTGAAGATCCTGCGCTTTCTTCTGGAGCATACGCTTTTAAACACCCACCTTCAATTTCAAGATCTTCTAATGATCTTCA TGCTTTAGGCAAGAGACAGAAAGAGGTATTCATCAATGAATCTGCTGATCAAATAAGGGGAGACCAAGAAAGAGAGAATGGCATAGGAAAAATGGAAGAG AGTCACATGGATAGTTACTTAAATGATGGCATTGATTCTTATCTGACTTCCAATTCAGCAAAAGACTGGGTAATGCCAATTACAGATGATATGATAGATG TTGAAACCCTTCAAGGAGATTCTTCAATTGATTGCTTTGGTGAATATCCTAACAAAGATTTTAAGGTTAAACGCATTGAGGATTGGGTAATAGGTCTCCA GCATTGTGGACCACCTCTAGAGATAATAAATGAGTTGCCTGAATCTGTAGACCCTGAAGTTGATGTTAACACCAAAAATGGTGTAACTCCTGCCAAGGTA GACCATAAGGTCCTTCCTGGAATGGAAGCTGCTAAAATATATATATCTTCTCTGAGTGCTAATGCCACAGCGGCTCAGCTGGCAAATCATGGGTTGGTTG TGATACCCTTTTTAAGTGCTTTTGTGAGTTTGAAGGTGCTCAATTTGGCTGGAAATGCTATTGTGAGGATAACTGCTGGTGCTCTTCCTCGGGGACTTCA TGTCTTGAATTTGTCAAAAAACAGTATCTCCACTATAGAGGGCTTACGTGAACTTACACGTCTTCGAGTCCTGGATCTCAGCTACAACCGTATACTAAGA ATTGGACATGGCCTTGCATCTTGTTCATCTCTGAAGGAGCTGTACCTGGCTGGAAACAAGATCAGTGAAGTAGAGGGTCTGCACCGCCTCTTGAAACTAA CTATCTTGGATCTCCGATTTAATAAAATTTCAACGACCAAATGTCTAGGCCAACTTGCAGCAAATTATAATTCATTGCAAGCTATCAGCTTGGAAGGGAA CCCAGCCCAGAAAAATGTTGGAGATGAACAACTGAAGAAATGTCTGCAAGGCCTTCTTCCCCATCTTGTCTACTATAATCGTCAGCCTATCAAAATGAGC ACTTTAAAGGATGGTGCAGAACGTTCAGTTCGGTTAGGCATGAATTCCCACCAGTTTGATCGCAGCGGTAGATCAGATCGCAAGACCACTACAAAGAAGA CCAGTCGGCCATCGACCTCTTCCACTCATGCTCGCAGAAGTCAAGCAGTAGAGTCACCAAAACTATCCAAAAGCAAGCAAAACCAGTTGCCACCATCAAC TAGAACAAGAGGATCAACCCCAAATCGCAATCATTTTGATGTTCCCAGTAAAGTGTTGAACATGACGTCAGAGCTCTCTATTCGCAAAAGTCGCAGTGAG GGAACTCTTGGAGCTTTGTGAGTGGTTATTCCATTGCCAATTGTTTCGATCACTGCCTTTGTTTCAGTATGCATCTATTTACATTGGTTTTTCATATTCG TGTCGGGTGTTTGTTTGAACCCTTTTATTGTTTGCCCTTAAATATGCTGCACTAGGTTTGGAAACATTGGTCTGTGGGCTGTATGCCCAAATAATAAGCA GCAGCTTTCTGTAATGTACCATTTCTGTTTCAGTACAAGGAGTGCTATGGCAATGATTTCTTTTAAACACCTTTGTTTTTAACATTCTCTCTCCCTCCCA TTTTTTAATCATAATTTCAAGAGAGTATAATGTGATAACTCAATAAGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_172556; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_343086
| Blastp | Protein phosphatase 1 regulatory subunit pprA from Dictyostelium with 32.76% of identity |
|---|---|
| Blastx | Protein phosphatase 1 regulatory subunit pprA from Dictyostelium with 32.76% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (DDB_G0284039) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453753.1) |
| Pfam | Leucine rich repeat (PF13855.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |