Ll_transcript_344937

• Id Trinity: TRINITY_DN50494_c1_g2_i7
• Name Transcript: Ll_transcript_344937
• Sequence: TGAAAACCTCCACTTCCATTTTCCTTTGCGTTCTTTTCTTTATTTTTTCCTTTCTTCTTAGTGCGTCTCACCCAACTTTTTCTATTCATGCTATAACACT ATTATATTTAAATCCTTCATATTATAAATAATATTCCCATTTATCCTTTTAGACATAAAATTATGACTCATATTAGTGCCTCGAAATTATAATACTGATT CCAGGGACTAAAATGATAAGTTGTTAATTGCAGAAAGAGACAAATGTAACAACTGCTTACAATTTTGAGGTCTTGTTCTGCTGCTATTTATTTCACAGAA GAAACACACTTCTGACTTGTGTTGCTATAAGCCTATAACAATGGCTTCTTCTACCTTGTGTCACCACTCTCTTAATCCTTCAATGGCATCTTTCACAACA ACCCACTTTTCAATTCCTATGTATAAAAAAATTTCACTTCACATGTCACCTTTTGTCAACTATGGCTACCACCTTGGAAACACAACAACCAAGAAGATAA CAACTTTGAAGGCAGTGAAAGCAAAAGTGGCTGAAGAAGCAGTGAGTGAGAATGATGGAACCCCTCAGAAGAAGAAGCTTCGGGTTCTTGTGGCAGGTGG TGGGATCGGAGGGTTGGTTTTTGCTTTGGCTGCAAAGAGGGTGGGATTTGAGGTTGTGGTGTTTGAGAGAGATATGAGTGCTATAAGAGGGGAAGGGCAA TATAGAGGTCCAATTCAGATACAAAGTAATGCTTTGGCTGCTTTGGAATCTATTGATCCTGATGTTGCTAATCAAGTTATGAGAGTTGGATGCATCACTG GTGATAGAATCAATGGCCTTGTTGATGGGATTTCTGGCTCTTGGTACGTCAAGTTTGATACATTCACTCCTGCAGTGGAGCATGGGCTTCCAGTCACAAG AGTTATTAGTCGATTGTCTTTACAAGAAATCCTTGCTCGTGCAGTTGGGGAAGATATCATTATGAATGGCAGTAATGTTGTTGATTTTGTTGATCATGGA AACAAGGTAACAGTGCAGCTTGAGGATGGTCAGAAATATGATGGAGATCTCTTGGTTGGAGCAGATGGTATATGGTCCAAGGTAAGGGAGAAGTTACTGG GGCCTAAAGATGCTACTTTCTCTGGCTATACTTGTTATACTGGTATTGCAGATTTTGTGCCTGTGGACATTGAATCTGTTGGGTACCGAGTATTTTTAGG ACACAAACAATACTTTGTATCCTCGGATGTTGGCGCTGGAAAGATCCAATGGTACGCATTTCACAAAGAACCTGCTGGTGGTGTTGATAAGCCCAATGGA AAAAGGGAAAGGCTGCTTAAGCTATTTGAGGGCTGGTGCGATAATGTGATAGATTTGCTACACGCCACAGAAGAACAGGAAATTCTGCGACGAGACATAT ATGACAGGACGCCGACAATGACATGGGGAAAGGGTAGTGTGACCTTGCTAGGGGATTCTATCCATGCCATGCAGCCAAATATGGGCCAAGGTGGATGCAT GGCTATAGAGGATAGTTATCAACTTGCATGGGAATTGAACAAGGCATGGGAACAAAGTATAAAATCAGGATCTCCAATTGACATTCATTCTTCCTTAAAG AGCTATGAGAAAGAACGAAGAATACGAGTAGCCATTGTTCATGGAATGGCTAGAATGGCAGCACAGATGGCTACAACATACAGGCCATATCTGGGAATTG GTCTTGGCCCTTTAGAGTTTTTGTCCAAGTTTAAGATACCACATCCTGGAACAATTGGAGGAAAGTTTATTATTGATAAGGTGATGCCTTCCATGTTGAG ATGGGTCTTAGGTGGAAATAGCTCAAAACTTAAAGGCAGACCGCAAAGTTGCAGGGTCACAGACAAAGCAAATGACCAGTTACAAAAATGGTTTAAAGAC GATGATGCACTTGAACGCGCTATTAATGGAGAGTGGTTTTTGTTACCTTGTGGAAATGAAGCAGGTTTTTCAGAACCTATATGTTTAAGTCAAGATGAGA TGAAACCCTACATAATCGGTAGCAAGCAGCAAGAAAGTTATCTAGGCAATTCAATTTTAATATCATTACCCAAGGTTTCTGAAACACATGCTCGAATTAA CTATAAAGACGGTGCCTTCTTCTTAACTGATTTGCGGGGTGAATATGGAACCTGGATAACTGACAATGAAAAAAGGCGATATCGGCTACGTCAAAATTAT CCAACTCGTCTTCGCTCATCTTATGTTGTTGAGTTTGGTTCTGATAAGGCTTCGTTTCGTGTTAAGGTGACAAGATCTGCTCCAAGGGTGACTGAGAAGG AAGGGACACAAAATCTCCAAGCTGTATGATTTTGATTCTGTTTGGTTACATTTTTTCTTCTAAAATACGGAATTTAAGGTTGTGCAGCACAGAAATTTGG GTCATAAGGCTATCTGCATTCTTAGTGCAGTGAATAATAGCACAATGCCGATCATTTAGGATCTGAACATGTCAAAGGAACTTTTGATTGAGATTTACAG AATGGAACTATATACTTATTGATAGTAGAAAATAAATTTGAGTTCATTTCTTCGATCTCTC
• Tissue: pods
• Gene name: LI_gene_177603;
• Additional information: details;

Expression of Ll_transcript_344937

FPKM

• PAB: 5
• PNAB: 8.4
• PS1: 27.2
• PS2: 17
• PS3: 29.6
• PW1: 10.4
• PW2: 7.8
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_344937

• Blastp: Zeaxanthin epoxidase, chloroplastic from Prunus with 68.99% of identity
• Blastx: Zeaxanthin epoxidase, chloroplastic from Prunus with 68.08% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423349.1)
• Pfam: FAD binding domain (PF01494.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;