| Id Trinity | TRINITY_DN50814_c1_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_514054 |
| Sequence | CACGAACACGCCTAGCCAACACATGAAATGGCACCGAGTATGTGTACCCACATAATACGGCGTCGTAAAGAGCTAAACGGGTGACGAGTACGCCAAACCT CGGGTGAATTAATTAACAGCAAAAAAACTGAAAAGACAACGCATGCAAGCACAATCATCGTAATCCGAGGAGTGAAGATATCATTCATTTTCAATCTCAT TCTCGCAGGAAAGAAGAGACAACGCCCAAATCCGAAAAAAAGATGGGCAAGGATCTGAGCGATGATCAAATTTCTTCAATGAAGGAAGCTTTCACTCTCT TCGACTCCGACGGTGACGGTAAGATCGCTCCATCGGAGCTCGGAATCCTTATGCGTTCTCTCGGAGGTAACCCGACCCAAGCCCAACTCAAAGCCATCGT GGCAGAGGAGAATCTCACCGCACCATTCGATTTCCCCCGATTCCTAGATCTGATGTCGAAGCACATGAAACTTGAGCCGTTTGATCGTCAGCTCCGTGAT GCATTCAAGGTTCTGGACAAGGAATCCACTGGATTCGTCTCCGTTACGGAACTCCGTCACATCCTCACCAGTATCGGTGAGAAGCTCGAGCCTGCTGAGT TTGATGAGTGGATCAGGGAAATCGATGTTGGATCTGATGGAAAGATCCGTTACGAGGATTTCATCGCCCGAATGGTCGCTAAATAAACTCAGATCCGTGC GTTTGAATCGGTTTAAATGTGTACTTTCTGGTATTGATTCTGTTTAATCATTGTAATGTTTGTTTTTTCTTTCTTATGTGGATCAATCAATTAGCTAGGT TATGTTCAATTTATTTTTAATTGAAAAGTGTTTTGTGTTATGTAGCTAACCGTGAGTGATTTTAGGAATGGTGGCTATTCAATTTGCCTGATACATTTCT TATTTGCGTGGTTAATTAAATAGTATGAGTCATGGTTGTCAAAGTATGTTTATGTAATGATTTGATCATTTTTCAGTCAAATTTGTGTTTGCATTTTTGC TGAAGTTGAATTAAGGAGGGTGTGTAGTGTTTCTAAAATCTAAAAAATGAAATGCACTATGCAAATGTGCTCATGACTATCTGAATGTGCTTGTGGGATT CTACTCGTTGTGGGATTTGTGGGATACTTTGTCAAATATTCCCCCTTTGTTGCATGATGTTATACTTGCATCTACTTTTTTGTTGAAGGAAGAGTTATAT TGGTTAGAAGTGAATAAGGTGAAGATTTTATTTAGGAAATGTTGTCACTCTGTAAATGGTACTCACAATAGTTGCATATGGTATTGAGTGTTCAGTAGAA GTTGAATTCGGGTTGTCAAAGCTAGAGAATATGGAGATGCAGGGGGTTGAACTCGTGCTTCTTGCATGCAAAGCGGGCACTCTATCATTTGAGCTGTTTT TCAATATGAGGATTGTAAAGATAAATGTTGCCACAAATGTACAATGTAAATTTTATTTTTGTCATCTGTCTTTGTATTCAATAGTGTTATGCAAGTTCTT CTGTAACAAGCTTTTTGGCGATGATCTATGAATGGTTAGTCTAACCTAAAGAAATATTCCCATACTTGTAGTGCTTATTGCAATTTTTAGCCTAGCTCTA AGAGGCATGCACAACTTTGATGTTTTAAAAATAAGGAAAGAGTGCTATCAGCTAGATGTGCACCCTTGCATGTGGGATTGTGCAACTGTATCATCCTTAA TCCTTAGGCATGACTATCAAAGTTAATTTCATGTTTGTGAATTATGATCATGTTAGGAGTCTCATATTGAGTAGAATAGCAAACTCAGTGTGGTACTTAA GCCATGAGACTCTCAAACCTAATAGACTAGTCTTTTGGGTTGAGTTATCTTCATATGCTTAAGTCCTAACAAATGATCAAATAATGTGTTCATACTCATA GTTTTATAAATACCACTGAAACATTGAGCTTTATGATAATAGTATTGATCTGTTATCTGTGTTAAGATAAACTTCATTGTGATCCGTTTTGACTTCTAAT GCCTGAATGATAAATATTGAATGTCAAAACTTAATACTTAATCTATCATAGATAGTTGATGAATATTTTTTTGGTGATTATATTATTCTTTGAACAGAAA TGAAGATAAACTATGACTTATTGATTGATCTTCTTTCGTGTGTCTGCTTGTTTGCTAGTGTATTTTTTTAGATACATTTCTCATTAGGTGTTATATAGAG TTGTGGTACTACTACATTTCTGGTGTTGCTGTCTCATGTTTTCTGCCAAGTTTCTGCCATCTGTAACTATTTGTTGAATCATTTCAATCTTTATTCTTGC AGAGAGGGCCACTTTATTCTTATGCTGATTTGAATGACTTGTGGAAGCTCTTAGCTGCTGTTGTGAGATACTGTGTTGGTACTTTTCCATATTTTTGACT GGTTTTGTATAATTACTATTTAAAAATTCTGACTATTCGGGCTCCCCGATTAACTCATTTTCGGTTTCCATTTTGGCTAAAAACTGAATGAACTTAAGTT TTCTGAAATCATGACACCAAGCTTGAAATTGAAAACAAAAAAACACATTTTACTGTTTCCTTTTATAATTTTGAAACATGGAAATTTGGGAACCCACCCT TGAAATGGAGAAGGAAAATTATGCATTATCAAATCATGTTGGAAGTTTTACTATCAACATGATGTTACTATCTTTTATTTTGTATTATTATCATTGTGGT AGTTAGTCTAAACTACATTGCCGATCATTTTGTTGGTTCAAACATTTTTTCTTCCGTTGGCACGCAATTTTGCATACACTTTTAAGTTTTTTTTTACAGA TGTAACATACTAGAAATATCAATGGCCCTCTCCTACTGTGAGATTTCTGTGGTTGGATTTCTTCTTTGTACTAAATACTAATCACCTTGAGTGCGCGCAT GTTTATGTCAATGTATGACTTGAAAAAAGATTAGAGCAAAATTTCTTATGTTTGAATCAGAATATTCAAACACCACTTCTAGCATTTCAAACCGGGTGAT CTGACG BLAST |
| Tissue | pods |
| Gene name | LI_gene_180196; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_514054
| Blastp | Probable calcium-binding protein CML13 from Arabidopsis with 86.49% of identity |
|---|---|
| Blastx | Probable calcium-binding protein CML13 from Arabidopsis with 86.49% of identity |
| Eggnog | Calcium-binding protein(COG5126) |
| Kegg | Link to kegg annotations (AT1G12310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445084.1) |
| Pfam | EF hand (PF00036.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |