Ll_transcript_516478

Id TrinityTRINITY_DN50857_c0_g1_i6
Name TranscriptLl_transcript_516478
SequenceAAATTTATTATCAAGTACCAAAAACACACTCTCCTCCTTAAAATCACACACCCAAGAAACAATGGCGGTTCTGTCTTCATCCATTGAAGCACACACAGAA AAGGAGAGAAACAGTTAAAGCAACAAAACTAGTACAACGGCCACCGCCGCCGCCACCACTACTGGAACTGCCACCCATTTCCCATCACCATTTAATAACC AATCCCGAATCTGACCCAACCCTTTTACTTTTTCAACAATAAAAAATAAAAAATAAACTCTTTTTAGTCACACACTGTTTTTCTGTCCCCTACTTGGAAA AAGAACAAGTAAGCACGTTTCTTACACTGTTCGTTTTTTCCGTTACAACTTTTGCTTCAGTTTTCAGCTCTGGCTTGAGTTGTTCACTCTGATTGCTATG CCCATTTGCTCTTTATCCTTGTTTGCTTCGGTTCTGTCGTGAGATTCGTGTCTTTTCTCGGATTCCTTGCTCTTTTGCTAAGATCTGTTTGGTTTTGAAG ATTCTTCAGTTGTTTGGTTTCTGGGTAGTACTTGGTTTTTTATGTTGTTTCCAAATTTGGTAACTTTTTGCAGAATGAAGTGTTTTATTGAAGATTGCAA CTTGGGGTGGTTTTGGTTAAGGAGGGTTGGAAGGGAATGAAGGGTGAAGTCAAAAAACTTGTCTTTTGTAGTGAAACTGGTTTTGGTTGAGGATTGAAAA GGGTGTGGAATATTCTGAGCTTCTTAGCGTTTTATCTTTGATGGGTCAGAAAATTCTGTAACTGGGTGTTTGAGTTTTGTTGAGGTTTAAATGGGTTTTT GGTAGTAAAGATATGAAGAATGATATTATGTAGTGAGAAGAAAGATATGAAGAATTGATCCACTTAAGATTTAAGAGTGTGTGTTTGAAACTTTGAATCA TTGACTGTGATCTCAATTCCAAGGTTTGAAATTTCTGAAATGAAGCTCTCTTCAGCTGGTTTTAGTCCTCCACCTGAGGAAGGAGAAAAGCGAGTTTTGG ATTCAGAACTTTGGCATGCATGTGCTGGTCCCCTTGTTTCTTTACCAGCTGTTGGAAGCCGTGTGGTATACTTTCCACAAGGTCACAGTGAACATGTTGC TGCATCAACCAACAGGGAAGTGGATGGCCATATGCCTAATTATCCAAGCTTACCTCCCCAACTTATGTGTCAACTTCATAATTTGACTATGCATGCAGAT CCTGAGACTGACGAAGTATATGCACAGATGACCTTGCAACCTCTGAGTCCTGAAGAACAAAAGGAGGCATACTTTCCAGCAGATTTGGGCACTCCGAATA ATCAGCCAACAAACTACTTTTGCAAAACTTTGACTGCCAGTGACACAAGCACTCATGGGGGGTTTTCAGTTCCTCGTCGGGCAGCTGAGAAAGTGTTTCC TCCATTGGACTTCTCCCAACAGCCTCCTTGTCAAGAGTTGATTGCAAGGGATTTGCATGGTCATGAATGGAAATTCCGACATATCTTCCGGGGCCAGCCC AAAAGGCATCTACTTACAACGGGGTGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTGTTTATCTGGAATGAAAAGGGTCAAT TGCTTCTTGGCATTCGGCATGCTAATCGGTCACAACCTGTGATGCCTTCGTCGGTGTTGTCAAGTGATAGTATGCACTTGGGCCTTCTTGCTGCTGCAGC TCATGCAGCTGCAACAAATAGTCGTTTTACCATTTTCTACAACCCACGTGCTAGCCAATCAGAATTCGTCACACCTTTAGCAAAGTATGTTAAAGCTGTC TATCATACTCGAGTTTCAGTAGGCATGCGCTTCAGGATGTTGTTTGAGACAGAAGAATCTAGTGTGCGGCGGTAGGTTCTTGAAATTTCTCTCGTTGAAA GTGATACCCTGTAATATCTATGTCCTGTAATATTTCATTTTGAATTTTAACATGGTTGCTGTTTCCAATTTGCCTTTAGTGTTGGCTTAATATTGTAGAT TTTCTTCGCTTTTGTAGAGTGGTGCTATGATTTTCTCCAATTAAGTGCCTTAAATCTTTGATTCATGATAGGTGAAGACCCAAATATTCTAAGAGTTAGA AAAAAAAACTAATCGGATCATCTTGCAGTTGAATCAGAAATATCAGATTAATGAGGTTCATTTTTTGCTTGGTGCCTTGTTCTGTGCTTCTTTTATTAAA CAAATAGGAGGTTTTATTCTAAACCGTGCGCCAATGCCTCTAAGGTTTGATTGTAAAGTTAAGGTGATATTTGTATCATGTTTCTTATGGCTCTATCAAG TATAGGCACGTGCTACTGGAAAGTATTCCTGAAATTGAATTCAACATAAGATACACAATATGTTTTGCTTCATTTATCTTGACATGTCATTAATCAATTG CATGGGTAGTAGTTTTCCTTTCTTCTCTTTAAATTTTTTGAATGATGATCTATAACTTATGGCAGTGAGATGAAGTAGGGACATGGATTCGAATCTATCC TTCTTATTATGATCTTGAATAATGGCCTAGTATAACAATGATGCTATCTATGAAGTTGATGTGATGAAATTTCTCACTGATAGGATAAATATAGTTAGCG ACTTTGTAGAGTTGGTGACCCATGTCTATAATATACTAATATATGCTCATGCAGATACATGGGCACAATAACAGGCATTAGTGACTTGGATCCTGCTCGG TGGCCAAATTCACATTGGCGCTCAGTCAAGGTTGGCTGGGATGAATCCATAGCCGGTGAGAGGCAACCTCGAGTGTCTCTATGGGAAATTGAGCCGTTAA CAACGTTTCCAATGTACCCATCTCCTTTCCCCCTCAGGCTTAAAAGACCGTGGCCTCTAGGACTGCCTTCATACCATGGCATGAGGGATAATGATTTTGG CATGAATTCTTCACTATTGGGGTTTCAGTCTCTCGATTTTCAGGGAATTGGTATTAATCCTTGGATGCAACCAAGGCTTGATCCGTCCATGGTGAATTTT CAAAATGATATGTACCAATCCATGGCTGCTGCTGCACTTCAGGATATGAGGACTTCAGATCCTTCCAAACAGCATCCTGCTTCTTCACTTCAATTTCAGC AACCACAGAACTTCCCCAACACGACTCCCATTTTAATGCAGACACAGATGTTGCAGCAGTCTCAACCTCAGCAGGTTTTTCCGAATAATCAAGAAAATCA GCATTCATCTCCATCTCAATTTCAAAACCAAGCGCATCTTCAGCAGCATCTGCAGCATCAGCACTCATTTAATAATCATAATCATCATCAGCAACAACGA CAACAACAGCAGCAACAACAGCAAATGGTAGATCATCAGCAGACTTCAAGTTCTGTCTCTCAGTTTGTTTCGATACCTCAATCTCAATCATCGCGCATGC AAGCTATCTCTTCGCTGTGCCAACAGCGAAGTTTTTCTGATTCAAGTGGGAACCCTGCGGCTACTGCTACTGCTTCTCGCCTGCACAATATGATGGGTTC ATTTCCCCAGGTTGAAACATCCCACCTTGTCAACCTTCCGAGAACAAGTTTTTGGATGCCTGTTCAACACTCAACTGCATGGCCTCCTTCCAAGCGTGTT GCCGTGGACCCACTCCTTTCATATGGAGGATCTCTATGTCAAGTGGAGCAGATAGGGCAGCCACAAATAACCATGTCTGAAAATGCTGTTACGTTGCCAC CCTTTCCTGGTAGGGAATGCGCCGTAGAAGGGAGCACTGATCCACAAAACAATATTTTGTTTGGTGTTAATATAGATCCCTCTTCACTTCTAGTCAATAA TGGGATGTCAAGTCTTAAAGGGGTCAGCGTCAATCGTCACTCATCATCCATGCCTTTTCAACATTCTAGTTACCTGAATGCCACAGGCACTGATACTTCA CTAAATCCCGGAATGACACACAGCATTGATGAATCGGACTTCCTACATACTCCAGAAAATGGGGGCCGAGGAAACTCGCCAATCAAAACCTTTGTGAAGG TTTACAAATCAGGGACCTTTGGGAGATCATTGGATATCTCAAAATTCACTAACTACCATGAGCTGCGCAGTGAGCTTGCTCGCATGTTTGGCCTTGGAAG TGAGTTGGAGGATCCTGTAAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTGCTCCTCGGTGATGGTCCTTGGCCGTAAGTATTT TCCACACTCTGTTGCCTTGTTCTCTGTTCCTTTTTTAAATTACAATATACATGAATTGCAGCCTCTTCTTTCAGTCATATGGTAGTTTTATAAAAACTAA AACCGCAGCCACTTCAGAAATAATTGAGTTACATAATCTTCCTCGTTTACGGGCTGTCCTTATGGAGAAGATGATATAAATAGGATAATGCTACTCATAG AAGCACGAACACTTCATATTAGCGACACTCTTAATCATATTCTTTAACGTTTTATATTCTTCACCATATCCCATTTCCGTTGTATCCGTGTCCCATGTTG TGTTTGTGCTTCCTTGATACTACTCAATCACATTTTATATTTTTCACCGTATCCCATTTCCATTCATGTGTTCTGGATTCCAGTACCTATAATTTATTCT GTTTATGAAAGCAAATCACTACGCCTTCTGTCCTTACGCGATCCTTTTTATTACAGGGACTTTGTAAATAGCGTATGGTGCATCAAGATACTTTCCCCGC ATGAAGTGCAACAAATGGGCAACAATAGCCTGGAGCTTCTGAACTCAGTTCCAATTCAGAGGCTCTCCAATGGCATCTGCGATGACTACACCGGCCGAGA CGACCAAAGAAACTTAAGCAATGGAATAACCACTTTAGAGTACTGAATGATGTTTACACTCAATACTTTAAAGTCCTTCTCCTTGTATTATTACCCTTGC TTCTCAACATTAGGGTTGGGAAGTGCTACTTAAATGTAGTTTGTAGACTACTATATAGCCTTTTATTTTCATGTTTTCACTACTTAGGACCTTTTTATAA ACTAAAACAATGTAACTATATGGCATCTTGTCACTGTACTTATCTATATACAATATATTGTTTACTAAATCTATTAGGAAGTCAATGTGTAAAGATGGTT CCTTCTATCTCTTGATATATTGATGATTTTTCTTCTTA BLAST
Tissuepods
Gene nameLI_gene_180513; 
Additional informationdetails; 

Expression of Ll_transcript_516478

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_516478
BlastpAuxin response factor 6 from Oryza sativa with 49.35% of identity
BlastxAuxin response factor 6 from Arabidopsis with 87.86% of identity
Eggnogauxin response factor(ENOG410YA3R)
KeggLink to kegg annotations (4328406)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019460128.1)
PfamAuxin response factor (PF06507.12)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;