Ll_transcript_514300

• Id Trinity: TRINITY_DN50869_c0_g1_i19
• Name Transcript: Ll_transcript_514300
• Sequence: CTCAATTGATTCGTTTAATTTTATTGTTGTAGTCATTTCTTTTCTTGCACGTTGACGTTCGGCTAGGAAAGATAGTTATGATTTACGAAAGGTGTTAGGT TTGTGTGTGTAGTCTGACTCGTAAGGACCAAAAGCACATTTCACAGTTATGAATTTTGATCTGTTTTGGACCAATTGGTGACGTAAGCCGAAAAACCCCT TAAACCTTTTCAAACACTTTTTTTTTTCCAGCAAAACCCTAATCCCTTTCCACCGCAATGGAGGAACAGAGCGAGGGAGAAGATAACAAAGAATTATACG CACTTTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTGTATCACCCTGACAAATATCAAGCTCCTCT CATGAAAGATATTGCTACGGAGAATTTTCAACGGATATGTGAAGCGTATGAGATATTATCAGATCCAAATAAGAGACAGATATATGATATCTATGGAATG GAAGGGTTGAAGTCTGGTTTGGAACTTGGTCCAAGGCTTGAAAAAGCTGAAGAAATCAAGGCTGAGTTGGAGAGATTGAAGAAAATGAAGGAACGCCAAA AGATGATGTCGCAGTTTCAATCTTCTGGTACAATTCTAGCAAGTATGTCTATGCCACACTTTCTAGACGGTGATGGCCTTTTCAGAGGGTATTGCTCACT TCATCACACTTTTCTCTTGTCTCTGTCACTCTTTTACTATGCACTGCCTTGATGATGAACAGTGAATAGTGTAGAATTTGCTAGACATATTATAGGGGAT GGAATAGAATATTCTGTTATGTTTGGCGTATCTTAGAAATAGAACAAAACAGGACATAAGATTACAGAAGTAGAACTTCCATGTTCTGTCCTGCCAAACA CTATCTGAGATTTGTCGGCTCAATTTGAAAACATAATGTTATTATTATTATTTTTATTAGTGATAAAACAACATGCTTTGTTTTAGGAATGGTTTTAATG ATCTTGAGACTCCATCTTAATATAACAAATTGCGGATAAGGCAAGCTGTTGTTAATATTATTATAAAAAATGCTTGTCTTCGGTACAATTGCAGCCTCCA TCTTAAGATTTTGTCAAAAACTGAAAATCCTTTAATTATTTCATCCAAAGACCTCCGTCACAGCAAAAATGTTGTAATGCGTATTTGATTATTTCATCCA ACTGTTTGTGTCTTTTATTATGTTTCTGAGTTTCAGAATGGCTATGACAAGCGAAATTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGC AATTTAGCAGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTACTTAAGCATCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTG GTTTACGTTCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCACACTCAGCTGCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAA TCTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACATATACAGCTTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAG AAAGAAGAGAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGTTCATTTGACACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTG GCTGCATAGGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGGTGGTGGGAGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGT AGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTACCGTGGGGGCCAAAAGTTAATTATTCCAATTTTGCTGACAAGGCATTTAAATCCTGTGTTTGCT ACTGGAGCGCTGTTTGTCCCAGGATCTCTTTACTTTGTGCTAAAGGTTATCATTCAAATCAATTTTACATTAAAACCGAATTATTGAGCAGTTTCTGCTG GTTTGTTTTTGTGAAGGCCTATAAATATTTATACTCCGTTAATTGTTAGTATGTCAGTTAGGAAGAAAATATTTTGTTCTGATCATTTGCTTTCCTATGA ATAATGTAGCACATTAGGACCCTGTACACGTCGTTGTTATCTTCTGCCAAAGAGAATGTTATTCCAAATGAGCTATCAATATCCAGTACTGTGATATCTT TAAGTTCTATATAATTTTTTAATGAAAACATGAATTGTATACTGTGCACAACCAGCATCTCTGTAAGAGTACACTGCTAAATTTTGTACCTACTAATAAT TTCCCTCTCAAGATTTTGAGTTTCCCTTTATGTAGTTGACATGGCTATCAAGTGTATTTCCTGCTATTTTCGTTTGTCCGACTTACAAGCTGTATTTTCT TTTGGTGGTATTTCCTGTATAGTCATCTTCTATTCTTACTTTATCTTGAGCTCCATTTCAAGTAAAATTGATTGAAAATAAAGAAAACACGCCCCTAACT TTTCAAAGATGCATTCATTCATATAAGCTGCACCATTAGTTGCAAAGATCTTTTATTACCCAGCGTTTGATGATTTTTCCCTCGTCCTTTCTCCTAATTA TTGAGTTGTGTATTTACAGAATTTTTTTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAA
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514300

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514300

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 71.72% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 62.2% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;