Ll_transcript_514310

• Id Trinity: TRINITY_DN50869_c0_g1_i28
• Name Transcript: Ll_transcript_514310
• Sequence: CTCAATTGATTCGTTTAATTTTATTGTTGTAGTCATTTCTTTTCTTGCACGTTGACGTTCGGCTAGGAAAGATAGTTATGATTTACGAAAGGTGTTAGGT TTGTGTGTGTAGTCTGACTCGTAAGGACCAAAAGCACATTTCACAGTTATGAATTTTGATCTGTTTTGGACCAATTGGTGACGTAAGCCGAAAAACCCCT TAAACCTTTTCAAACACTTTTTTTTTCCAGCAAAACCCTAATCCCTTTCCACCGCAATGGAGGAACAGAGCGAGGGAGAAGATAACAAAGAATTATACGC ACTTTTGAACTTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAAAGCTTATCGTCAATGGGCTCAAGTGTATCACCCTGACAAATATCAAGCTCCTCTC ATGAAAGATATTGCTACGGAGAATTTTCAACGGATATGTGAAGCGTATGAGATATTATCAGATCCAAATAAGAGACAGATATATGATATCTATGGAATGG AAGGGTTGAAGTCTGGTTTGGAACTTGGTCCAAGGCTTGAAAAAGCTGAAGAAATCAAGGCTGAGTTGGAGAGATTGAAGAAAATGAAGGAACGCCAAAA GATGATGTCGCAGTTTCAATCTTCTGGTACAATTCTAGCAAGTATGTCTATGCCACACTTTCTAGACGGTGATGGCCTTTTCAGAGGAATGGCTATGACA AGCGAAATTCAGTCTCAGTTATCGAAGCGCAACGCTGTTACAATTGGTGGCAATTTAGCAGTTGACGGAAATAAAGGTGGCGGAGCTGCTACTGCCCTAC TTAAGCATCAAATTTCACCAGTTTCATCTATAGAATTTGTGGCATCATCTGGTTTACGTTCACTAATCGGATTGCAAACATCCCGTAATCTATCTTCACA CTCAGCTGCGACATTGGGCATTGGAATGTCTTTGCAAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGACAACTGTCAGAAACAGCAAGCGGACAT ATACAGCTTGATTTGGGACAACAGTCATCCATAGCTGTTGGGTGGCAAAAGAAAGAAGAGAGAGGGTCTGCGTCAGGAGAAGTGAAGATTGGCACAGGTT CATTTGACACAACAGTTCGGTATACCCATCGTTTTTCTCGTAATTCACTTGGCTGCATAGGAGGAAGATTTGGGAGTTCTGCGCTTGAGCTTGAAGTTGG TGGTGGGAGGAAGATATCGAAATTCAGCACTGTCCGCTGGATGTATACAGTAGGAATTCAGGGTATTTTCTGGAAATTTGAACTCTTCCGTGGAGGCCAA AAGTTAATTATTCCGGTTTTGCTGACAAGGCATTTGAGCCCTGTGTTTGCTACTGGAGCGTTGGTTGTCCCAGCTTCTCTGTACTTTGTGCTGAAGAATT TTTGTATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGCTCTAGAGAATGATGAGAAAACTTCTAATCAGGTTCAGGAAGCAAGGGCTGCATCAGA GAAAGCTCAGAAATTACTACAAAATGTGGCTACTAGAAAAAGAAACAAGCAATTAGAAACAGGTGGACTGGTTATTATGAGAGCACTATATGGAAATCAA AGAATTGTGAACAACTTAAATTCATCAAGTGAAACAAGTTTTGATTCAACTTCAGAAGTCATAGATGTTACAGTACCTCTGAATTTTCTGGTTAATGATT CTGGCCAACTCAAGCTTCATGAGGGTGTTAAAAAATCAGGCATCATGGGTTTTTGTGATCCATGCCCTGGAGAACTTAAACAATTGTATGTAGAGTACGT TTATGCCGG
• Tissue: pods
• Gene name: LI_gene_180620;
• Additional information: details;

Expression of Ll_transcript_514310

FPKM

• PAB: 0.7
• PNAB: 7.7
• PS1: 4.9
• PS2: 3.9
• PS3: 4.5
• PW1: 5.2
• PW2: 3.3
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_514310

• Blastp: Chaperone protein dnaJ 13 from Arabidopsis with 66.8% of identity
• Blastx: Chaperone protein dnaJ 13 from Arabidopsis with 66.6% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT2G35720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445060.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;