Ll_transcript_388209

• Id Trinity: TRINITY_DN50926_c0_g1_i20
• Name Transcript: Ll_transcript_388209
• Sequence: GCCATTTCTCTTTCTTTTCCAAAATATCACCCATTTTTTAATTGGATTCAAATTAAGAACCTGCATCCACACTCATTTATTAATTCACCTTTATTAAATT TCCAAGACGGACGTGAAACAATTTCTAAACCAAAATTTATACTTTCAATTTTCTACTTAAAATAATATTAATTAAATTCCCATTATTTAATCACTTTATT GTTTTAAAAAATCTATTATATTCTCCATTTTTCCAACTTTATTTAGTTACTCAACCTTTTCCTGCAAAACCCTAATTTTCTTATATCACGCTGGGCAATT TATGAACTAGAGTGTTATTTTTCTCTGTAATTATAGAATTTATTTTTAAAAAAATTGTCTTTATTTTTTTTCTGAAGCTCTTTGTGTTCTCTGCAATGGT GGAGATTTGAGCTACAGTACTGTGTTTTTCTCGGAATTCAACCTCAACCGTTGAAAATTCAAAAAATTCTACTTCTGGGTTTTCATCCCTTTGCAAAAAA GTTTGTGTTTTTGAAGTTTTTTGTGCAGTAACAAATTCCCCTCAGCTCAAAGTCTTAAACGTCTTTCTACTGTTTTCTGGGTATCTTTAGTTCTGCATTC AAATCTATTTAAGTTTTAAAAAGAATCGTCAATGGGTAGGGTTTAAGTGTTTTTTTGTTGAGGTTTTTGTCTAATTTTTTCTCTGATCAGCATAAAAATG GAGGAAAGAGAGATTTTTGGTTCTGAGCATGTGGTTAAGGGTAATGAGGCCACAGATAGCTTCCACGTGGCACCGAGAACAGAAAACGTGGTGCAGTTTC CCGGCACGGCGGTGGAGTTGCCTGATGTGGCGCTGGTAAGCACGGTGGTGACACCAGGAACTGCAGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGG ACCGGACGGCAAGGTGGCAGCAGCAGCCATGGCCCTCTCGCCGATGCCGATATCAGCGTCGATTCCATGGACCGGCCAGTTCTCAGCTTGGAAAAGGGGT AGAGGGAAGTCTGTTGAATCAATGAAGAAGTCAAACTTTTATGAAGTTGAAAATGCTGGACCAGGTTATGGAATTGCATGTTCTGTTGGTGCCAATTTCA CTCCTTACGTGCTTACAGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCCTTCTCTCAACAGGGACACCGTGCTACATGCATTCTCTCTGCAAA TGGCACAATTTCAAATGTTACACTCCGTCAACCGACTTCCTCTGGTGGTACTTTAACATATGAGGGACGATTTGAGATTCTTTCATTGTCTGGTTCATTT ATGCCAACGGAGAATGGATTCATAAAAAGCAGATCTGGCGGGATGAGCGTCTCTTTGGCAGGTCCGGATGGTCGTGTAATGGGGGGTGGACTTGCCGGTT TGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCCAGTTTTCTTCCAGGTCAACAGCTGGAGCAGAAATCGAAGAAGCCAAGGATAGAACATATATC AACTACTGCACCAACACATGTTAATCCAATTTCTGCTGAAGAAATAAAAATCAGTTTTGGTGGAGTAAAGCCTATTATGATGACACCCGCCGCTTTTCAA GTAGACAACAACTACGGTTCTTATAACAATGTTCAAGGTTCTAGGAACTCATCTGCTGATAATGAAGCACCTTTGCAAGAGAAGGGTTCTAACCCCAGCA TATTAGATGCTGGGGGAGTTGCATGCTAAAGACATGGTTGGTGCTGACAATTAACCTAAGAAGATGAGTGCTATAATGGGATGATGTTATGTTTGTTATG GTTAAGAGATTGTACCCTGTGTTGGTACTAGCTGATTTTATTATATATAAGGCTTTGTTGTCTGCTCTCATAATGTGTCTTTAATATTGTTTACTCATTA TTGTAGCAATTAGATGTAGGAAATATGTGATGCCACGTTTTTAGTTATTTACATCATTCTATAAGAACAATTGGAATGAGATTATGTGTTCATTATGTTG TCATGTTGGTTTTGTGACTGTAGCAAATGGTATTGTTTGGTGTGAAAGAAGAAATTACATTCAGCTTTTCATAGTGGTATGGTTTTTTCAAAA
• Tissue: pods
• Gene name: LI_gene_181054;
• Additional information: details;

Expression of Ll_transcript_388209

FPKM

• PAB: 12.5
• PNAB: 22.2
• PS1: 22.9
• PS2: 9
• PS3: 13.4
• PW1: 21.1
• PW2: 14.3
• PW3: 8.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_388209

• Blastp: AT-hook motif nuclear-localized protein 6 from Arabidopsis with 51.16% of identity
• Blastx: AT-hook motif nuclear-localized protein 6 from Arabidopsis with 51.92% of identity
• Eggnog: AT hook motif domain containing protein, expressed(ENOG410YFD3)
• Kegg: Link to kegg annotations (AT5G62260)
• CantataDB: Link to cantataDB annotations (CNT0000128)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449431.1)
• Pfam: Domain of unknown function (DUF296) (PF03479.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;