Ll_transcript_299778

• Id Trinity: TRINITY_DN51538_c0_g2_i6
• Name Transcript: Ll_transcript_299778
• Sequence: ATATAATGAAAATATATAAAACTTGTAAAATCTTATTACTTACATTTTTATGATTAAATAATTATGAACAGCAAAAGGCACTTCTCTTCTTTCTCTGTCA TCCTGAATGTTCATGTGCTCACTTCATACTTCATAGAAAGTGTGTCAAAAAAATCTTTATAAGTAGTCACTGATCTAATATACAGTGTGAGAAAGTAAGT TGTCATTTGTTTCTTTTCTATGTTTCCCTTTTCTCCCTTTGTTTTTAGTTTGCTTATTTGCCAAAGATAGAGAACAGAATAAGGAAACCTTAAAAAGGTG ATAGGATATGTATATAGTTTATGATTCTGAAGTGAAATAAGAACACCCTTTTGCTTCTTTTTTGGTTTTCTTCTCTGCTTTTTCACTTGTATAACTAAAT TAAGGTCACAATACTAGTACTTGGAACTTTTCTCCAACAAAATCTTACAAAAGTTTATGTGTATTATTCATGTTTGTAGTTTACTTAGCTTCTAGTCTTA GTAAGAGTCTTTATCAAGAAAAAAGCTTTCAAATTTCAACTCTCTTGTTTCATACTCATCATATTCATAGCCATGTGAGTATTCCCTTAATTTTGAGTTT ATGTGGTGATTTTGTGAAGGTGAATTGCAGGAGTGGTGGAGAATCAAGGATTGTTGAAGAAGGAGAAAGAGATAAAGGTTGAGAAAAGATGAAGAACTCT ATATCAGAAAACAGTATTTACATTGAGAGTGATGAAGAAGATGAGGAGAAAGATTTGAACAAGGGTGGAGATGATGGTCATGATTCTGATTCATCCAATT ACTCAAATGAAAACCCACCACAGAGAAAACCAAGTTCCTACAACATTTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTATACAGCAGTGTACCATC ACCAAATATTGGATTTCTTGGAACTCCTTCATTGACAAGATTAAGCAGTTCATTTCTTTCCACATCTCTAACAAGGAGGCACACTCCTGAAGCACTTCCT TCAGTAACAAAACCTCTGATTCAACCAACTGAAGAGGAACATCACAGACGTAGCTCTCATACCTTACTTCCTCCTCTTCCTAGAAGGTCTTCTTCCCTTA TTAAGGACTCCAAGGTCTCTCATGAAGGCCCTATTTCTAGCCATTGCTCTTTTGGACAAGCTGTCCTTAATGGCATAAATTGCCTTTGTGGTGTGGGAAT CCTTTCTACCCCTTATGCTGCACAACAAGGTGGATGGGTTGGCCTTTCTATCTTATTCATTTTTGCACTGATTTCCTTCTACACCGGGATGCTCTTACGT TCCTGCTTGGATAGTGAACCTGGTATTGAGACATACCCGGACATTGGCCAAGCTGCATTTGGTACTACTGGACGTATTGTCATTTCGATAGTACTCTACG TGGAATTATATGCTTGTTGCATTGAGTATATAATTTTGGAGAGTGACAACTTATCTTCCTTGTTTCCAAATGCATCCTTAAATTTGGGTGGAATTGAATT GAATTCTCATATCCTCTTTGCATTGATTGCCACCTTGGCTGTTCTTCCCACCGTTTGGCTCCGTGATCTAAGCATTCTCAGTTACATCTCAGCTGGTGGA GTTATTGCATCAATTTTAGTGGTTCTATGCTTGTTCTGGGCTGGTGTAGAAGAAGTTGGCTTTCAAAGCAAAGGGACAACACTGAATCTTACAACTTTTC CTGTTGCTGTGGGTCTCTACGGATACTGCTACTCCGGACATGCTGTATTCCCAAACATTTATACATCCATGGCAAATCCAAATCAATTCCCTGCAGTGCT CTTAACATGTTTTGGTATTTGTACCCTCCTGTATGCTGGAGCTGCTGTTATGGGATACACCATGTTTGGAGAAGCTATACTCTCTCAGTTCACTCTTAAT ATGCCCCATGATTTGGTGGCCAGCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAATATGCATTGACAATATCTCCAGTGGCAATGAGTC TTGAGGAACTGATACCATCAGACCATGCCAAGTCTTATCTATATTCCATCTTCATCAGAACTGGGTTGGTAGTTTCTACCCTCATCATCGGCCTATCGGT TCCCTTTTTCGGACTTTTGATGTCATTGATTGGATCATTGCTCACAATGCTTGTTACTTTGATACTTCCCTGTGTTTGTTTTCTAAGAATCTTGAAGGGA AAAGTCACACAATTACAGGCAGTACTTTGCATTACAATTATCACAGTAGGTTCTGTATCGGCAGTTTTCGGAACATACTCTGCTCTCTCCGAGATTGTTA AGAGTTTGAGTGGATGAAGTTGTGCGGCTCCAATCCGAGACAACGACATATGTCTGCAATTTCCTAGCTTGCCATATTATTCTTTCTATGCTGATTGGTT ATCCTCAATAATAAGTCACATTTTCTCTTCAAGTGGTTATTGTGGTTGTTCTACTTTCTAGTTACCTTATCATAAAAAGTTTTGCTCAAGTTTGAAGTAT CGGCTATTATAAAACAGATTATTGCAGAGAAACATTAGAGTTTGTAATAAAGTGTGATCAAATAAGTTTAGTAAAGATATGTTTTTTGGAGTTCACAAGT GTCTAGTGCAATCTCTTGATGATGATGAAGAATCTCTACTACTATTTCATGCATCAATAGTATATTCATCCACTAGGTTCCAATGAAATGGATCTGGAAC CATTCAAGAAAATGGCTTGATAGCATTGTTTTCTTTCTTGCTCCTTCAGAATTTATAGAGAATAAAACAGAACATCAAAAAATGTATTACTCCC
• Tissue: pods
• Gene name: LI_gene_185703;
• Additional information: details;

Expression of Ll_transcript_299778

FPKM

• PAB: 0.5
• PNAB: 0.8
• PS1: 0.3
• PS2: 0.8
• PS3: 0.2
• PW1: 5
• PW2: 5.2
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_299778

• Blastp: Amino acid transporter AVT1C from Arabidopsis with 69.95% of identity
• Blastx: Amino acid transporter AVT1C from Arabidopsis with 72.75% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT2G39130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459069.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;