Ll_transcript_446521

• Id Trinity: TRINITY_DN51849_c1_g1_i14
• Name Transcript: Ll_transcript_446521
• Sequence: CAACAACATGGATTCACAAGTCTTCACTTATTACAATCTATCACCTTTCTTCTTCTCCTTTCACTTCTTTCTCTAAATTTCCACAACACCAATTCTTCTA TTTCTCTTTTTCTCTTTTACCCAATCTCTCACTTTTAACTTTTTCTTTCTCTTTTAATTTTCTACTAACTTGGGACCATTAAAGTTCTACCTTTTTTCAT TCTAAGTTATTATGCTCTTCTGGGCAACTCTATAAGGTCCCTTTTTTAGTTTTCTTAATTTCAATAGTTTTTTTCATTCTATGTGTCTTTCTTAGCTCAT GCTTGTTTCTAAAGTTGATTATAAGTTGGTGATGCTGCAGAAGCAAAAGGGTTTTTGTATGTTGTTGAATTTCAATTGTTTGTTCAATATTGATGATTTT TTTTTTGTTTTTGTTTGCCTGTCATGTGTTTGATCTTGAAACTGTGAGGTGTTTTGAATTTTCTTGCTCCAACTTCCAACCATTGGGTAAAGTTTGAAAT TTTGAAGTTGTTTTCTCAATCTCATAGGTTGTCTACATTGTTTGGTGTCCTTTTTTGAAAGTGGTACTTTTTTCCATTGTGTTTTTCTGCCTGATATACT CTGACACATAATTCATGTGCATGTCTATTACCAATGTTGTGAAATTTGTTGCATAGTGTGTCTTTTTTTTTCTAGCTTTTCTGAAATATGTTGCATGTCT TTTGTTTGCTTTTCCATATCACATGATCTTCATCTTTTGGGTTCTCTGGATCTTGCAATTCTAGATATGATCTCTTTCATCAGCTTTGTAGTTTTGAATT TATTAGTGAATCGACCCGTTTTTTTGCTAAAGTTTTTCGGTATTTAGTAACTGAGTTTTTTCAATTCCATTTTGTTAACTTTTCAATGTGGCCTATACAA TTGGAGTTCTATATTCCTGGTTTAGTTTTTTCCTCTTTTTTTGTTTTTGCTTCAAGGTCAAACCCTTTACTCTTTTTACGTGTTCTTCGGGGCCATATAT TATTTTTGCTCTACTGATTTTTCATTTTGAACTTATTCAGTGTAGTAATCATTCCAAAGCAGGAAAAGAACTTATTTGGTCTGGTTGTACTGCAGTATAT CACTCAAGAGTAAAGTTCCTTCCAGAGAGTGGAGCTTGGTGTGATCACTGATCTTGGGGAATAATATCTTATTGATATTTCAAATGCTAAATTTCGGTAG GTCCAGAACTCAGCCCAGGGCAACCAGGTCTATGTCAATGGGAGGGATGGATTATGCTGATCCAAAAAGGAAGGGCAACTTTTTTGTAAAAGTTTTTCTT GCTGCAGCGTTGACGACATTATGCATCTTCTTGATCAAAAGATCTCCATCTTTTAATTCTCCGAGTCCCGTAATCCCTATTTCGCATGATCTCGTCATTT CTAAATCCGTAGCTCTTTTTACACTTCTATTCATTTTGTTGTTTATTTTTTGCTCTTTTTGATTTTTTCAGTTTTCCATCCATGAGCCAGGGGTCACTCA TGTTTTAGTAACAGGAGGTGCAGGCTATATTGGCTCACATGCTACCCTACGACTTTTGAAGGACTCTTATCGTGTCACCATAGTGGATAATTTGTCTCGA GGAAATTTGGGTGCCGTTAAGGTTCTTCAGAACTTATTTTCAGAACCCGGAAGACTTCAATTTATATATGCTGATTTGGGAGATGCAAAATCTGTATCCT AATAATCTTTCCTTGTTGCAAAAATATTTACTTTTAAATTTTAACTTCGATTGAAACGAATGCTAAAGAATGACCAAAAATTTGTCTACTTGACTAGTTA TAAGGTTGATAAAATATTTTCAGAGAATAAATTTGATGCTGTGATGCACTTTGCTGCTGTTGCTTATGTGGGAGAAAGCACACTTGACCCTCTTAAGTAT TATCACAATATTACATCAAATACATTGTTGGTATTGGAGTCTATGGCTAAACATGGTGTGAAGACATTCATATATTCTAGTACATGTGCAACATATGGGG AGCCTGAAAAGATGCCTATTACAGAAATAACAGAACAGAAACCAATTAATCCATATGGAAAAGCCAAGAAGATGGCTGAAGATATCATACTTGATTTTTC CAAAAATTCTAAGATGGCAGTGATGATTCTGAGATACTTCAATGT
• Tissue: pods
• Gene name: LI_gene_188043;
• Additional information: details;

Expression of Ll_transcript_446521

FPKM

• PAB: 2.4
• PNAB: 1.5
• PS1: 2
• PS2: 0.8
• PS3: 1.5
• PW1: 1.8
• PW2: 3
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_446521

• Blastp: Probable UDP-arabinose 4-epimerase 3 from Arabidopsis with 86.73% of identity
• Blastx: UDP-arabinose 4-epimerase 1 from Arabidopsis with 62.5% of identity
• Eggnog: udp-glucose 4-epimerase(COG1087)
• Kegg: Link to kegg annotations (AT4G20460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426467.1)
• Pfam: NAD dependent epimerase/dehydratase family (PF01370.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;