| Id Trinity | TRINITY_DN51849_c1_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_446522 |
| Sequence | CAACAACATGGATTCACAAGTCTTCACTTATTACAATCTATCACCTTTCTTCTTCTCCTTTCACTTCTTTCTCTAAATTTCCACAACACCAATTCTTCTA TTTCTCTTTTTCTCTTTTACCCAATCTCTCACTTTTAACTTTTTCTTTCTCTTTTAATTTTCTACTAACTTGGGACCATTAAAGTTCTACCTTTTTTCAT TCTAAGTTATTATGCTCTTCTGGGCAACTCTATAAGGTCCCTTTTTTAGTTTTCTTAATTTCAATAGTTTTTTTCATTCTATGTGTCTTTCTTAGCTCAT GCTTGTTTCTAAAGTTGATTATAAGTTGGTGATGCTGCAGAAGCAAAAGGGTTTTTGTATGTTGTTGAATTTCAATTGTTTGTTCAATATTGATGATTTT TTTTTTGTTTTTGTTTGCCTGTCATGTGTTTGATCTTGAAACTGTGAGGTGTTTTGAATTTTCTTGCTCCAACTTCCAACCATTGGGTAAAGTTTGAAAT TTTGAAGTTGTTTTCTCAATCTCATAGGTTGTCTACATTGTTTGGTGTCCTTTTTTGAAAGTGGTACTTTTTTCCATTGTGTTTTTCTGCCTGATATACT CTGACACATAATTCATGTGCATGTCTATTACCAATGTTGTGAAATTTGTTGCATAGTGTGTCTTTTTTTTTCTAGCTTTTCTGAAATATGTTGCATGTCT TTTGTTTGCTTTTCCATATCACATGATCTTCATCTTTTGGGTTCTCTGGATCTTGCAATTCTAGATATGATCTCTTTCATCAGCTTTGTAGTTTTGAATT TATTAGTGAATCGACCCGTTTTTTTGCTAAAGTTTTTCGGTATTTAGTAACTGAGTTTTTTCAATTCCATTTTGTTAACTTTTCAATGTGGCCTATACAA TTGGAGTTCTATATTCCTGGTTTAGTTTTTTCCTCTTTTTTTGTTTTTGCTTCAAGGTCAAACCCTTTACTCTTTTTACGTGTTCTTCGGGGCCATATAT TATTTTTGCTCTACTGATTTTTCATTTTGAACTTATTCAGTGTAGTAATCATTCCAAAGCAGGAAAAGAACTTATTTGGTCTGGTTGTACTGCAGTATAT CACTCAAGAGTAAAGTTCCTTCCAGAGAGTGGAGCTTGGTGTGATCACTGATCTTGGGGAATAATATCTTATTGATATTTCAAATGCTAAATTTCGGTAG GTCCAGAACTCAGCCCAGGGCAACCAGGTCTATGTCAATGGGAGGGATGGATTATGCTGATCCAAAAAGGAAGGGCAACTTTTTTGTAAAAGTTTTTCTT GCTGCAGCGTTGACGACATTATGCATCTTCTTGATCAAAAGATCTCCATCTTTTAATTCTCCGAGTCCCTTTTCCATCCATGAGCCAGGGGTCACTCATG TTTTAGTAACAGGAGGTGCAGGCTATATTGGCTCACATGCTACCCTACGACTTTTGAAGGACTCTTATCGTGTCACCATAGTGGATAATTTGTCTCGAGG AAATTTGGGTGCCGTTAAGGTTCTTCAGAACTTATTTTCAGAACCCGGAAGACTTCAATTTATATATGCTGATTTGGGAGATGCAAAGTCTGTTTATAAA ATATTTTCCGAGAATAAATTTGATGCTGTGATGCATTTTGCTGCTGTTGCTTATGTTGGAGAAAGTACACTGGACCCACTTAAGTATTATCACAATATTA CATCAAATACATTGTTGGTATTGGAGTCTATGGCCAAATTTGGTGTTAAGACATTGATATATTCTAGTACATGTGCAACATATGGGGAGCCTGAAAAGAT GCCTATTACAGAAGTAACAGAACAGAAACCGATTAATCCATATGGAAAAGCCAAGAAGATGGCTGAAGATATCATACTTGATTTTTCCAAAAATTCCAAG ATGGCAGTGATGATTCTGAGATACTTCAATGTCATTGGATCAGATCCTGAGGGGAGATTAGGTGAGGCTCCAAGACCTGAACTGCGAGAGCATGGTCGAA TTTCAGGTGCCTGCTTTGATGCAGCTCGTGGCATTACACCTGGCTTAAAGGTTAGAGGAACAGACTATAAGACAGCTGATGGAACATGCATTCGAGACTA CATTGATGTCACTGACCTGGTTGATGCTCATGTCAAAGCTCTCGAAAAGGCACAGCCTGCTAAAGTTGGAATCTACAACGTTGGCACCGGAAAGGGTAGG TTTTAACACTTAGAATATATAGACAATAGTGCTTTGATTTTCTTGATAGTTAATTCACATATTTCTTTGTTTATCAGGTAGATCAGTGAAGGAGTTTGTG GATGCTTGTAAAAAGGCTACCGGAGTGAACATTAAAGTAGACTTCCTTGAACGTCGCCCTGGTGATTATGCCGAGGTGTATAGTGACCCGACGAAGATCA AACGTGAATTGAACTGGACCGCAAAACACACTGATCTTAAAGAGAGTTTACAGGCTGCATGGAGATGGCAGAAATCTCATCGCGACGGTTACGGCGTTTC AAATGCAATATATTGAGTTATATAGAATTCTAACATAGCACAAGACTAGAAGAAATTCCAGCAGCAGAATCAGCATCAGCAGCATCCATATCAGCTGCAC TCATATTTGCTATATATTAGAAGAGTGTCTCATTTTTTTTTTCTTTTTTCCTTCTTTTCACTCTATAGTGAATAGGGATTTGGTAGTTTATTTCTTATAT ATTGATCAGATAATATGATTTAATAATATAATGCTGAGTATGGTGTAGTTTACCTCTATCATTTCATTTTCCCCTAATCATTATAAGACAAAGGGTGTTA GTGTTACTGATGATGTAAATAAACAAATCTTGACTTGCAATATATGGTCATGGTCATACCATGTCATCTTATTTTTCTTTCCAATAATTGGAATAAGAGT GTATAAAGATTTATACACACTCAGTACAATATCTACTATTCATTTGTATTACTTTTTCCTAAAGAATCAATGATGATTATACATGAATGAATGGTGAATA ATATACTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_188043; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_446522
| Blastp | UDP-arabinose 4-epimerase 1 from Arabidopsis with 83.14% of identity |
|---|---|
| Blastx | UDP-arabinose 4-epimerase 1 from Arabidopsis with 83.14% of identity |
| Eggnog | udp-glucose 4-epimerase(COG1087) |
| Kegg | Link to kegg annotations (AT1G30620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426467.1) |
| Pfam | RmlD substrate binding domain (PF04321.16) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |