Ll_transcript_399022

• Id Trinity: TRINITY_DN51912_c1_g1_i9
• Name Transcript: Ll_transcript_399022
• Sequence: CCTTATCCTATGAATACTCTTAATACTACTAAAATACCTATGTATGAATTTTGTCAAAAAATGGTGTAAGAATTTTACATAATGTTAGTATCTAGATATT ATTGCGTGTAATTTTCTGTTTCTAAAATATACTTTTCTGTTTGTGACTACTTTTCTGTTTCTGAATCTTTCTATAAAGTAAGCTTTATTGGACACCAATC TCTCAAAAACCTCTTCTTGTTCTTCTTTTGGGTTTCTTCTCTTTCCTAATTTCCTCTCTTTCCTTTTGTGCTTCTTTCAAACATATCCTTAAATCTTCAG AAATTGTTGGATTCTTATCCAATTCTTGATTTTCCCAATTTGGTCCAGTTGAACCTTTATTGAGGTTGTAAACTCCTTGTTGTTGGGTTTTGAAAGTTGA TTCCTTTTCACTTTCTGGATTCTGGGTTTCATTTCTCTTCTGGGTCCCTTTGATTCACCAGAGTTGGTTTAAGTTACTTGAAACCTGAAAATGACAATTG GAAATCTTGCACCAAAATCAGAGAAGAAAAGATCAAGGAAGAACAAAGCAGTTGTTGATGAGAATGCACCCTTGTTGCCTAAAACTCATGAGAGTGATGT TGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTTAACTTATCCACCACAATTATTGGTGCTGGGATCATGGCCTTGCCTGCTACATTA AGAGAGTTGGGGATGGTGCCTGGTCTTATTGCAATTATCATCATGGCTTTGTTGACCGAGAAGTCGATCGAGTTCTTGATTAGGTTCACCAGGGCAGGGA AGTCTTCTTCCTATGGAAGTTTGATGGGGGATTCCTTTGGGAAATATGGAAAAGTTCTGGTGCAATTGTGTGTTATAGTTAATAACATCGGCGTTTTGAT TGTTTACATGATTATAATTGGTATGACATTCAATTATATCTTCATTACTTCAATTTATTGCGGTTGATTTGTTGGAAATTCAAGTGAGTGTCACTTTTAA GTCTCATATCCGTAAAGATCGAGTTAATTGAATATACTTGGTTCGTCATAAAGGAAAACTTATGACAATAATGTAAAAAGTGACGAATGAGTATGAACCA CATATCACATATCAGAACTGGTACGAGGTACCATGTAACTATGAGGCTATTGATAGAGATCTCCCTTGTTTTCGAGTTCTCCTTATGGTCCAAGAGATCT AGTGTTGTCTAATTCAGTTTTGTATTGTTCTGGTAGGCGATGTGCTGTCTGGAACATCTGCAAGTGGAGAACATCATTCTGGTATCTTCGAAGGATGGTT TGGTGTGCACTGGTGGACAGGGCGGACATTTATCGTCCTTTTCACAACGCTTGCTATATTTGCACCCCTGGCAAGCTTTAAGCGAATTGGTTAGTGTCAC TCCTTTGATCGAAATTTAAAAAAAAATTGTCGGTTATGTTATTTATTTAGTGTTATGAAGATGACTGAGAAGTAGGAACACTAAGATACATCGTTAGACT GTGATGCACAAGTTGTAGTTTTGACCACCCATGACTGCACAATTGATTACTTCAAGGGCTGTTGTAACTAAATTACTCATCAAAATATACGTTGCAAGTG TTACATCCAAATTAAATTAGCATCAAGGCTTAAGAATTAAGATGAGTTGTGTATCCTCATTTCTCATGTTGATAGCTTTAATTTTTCTGATACTTAGTTT GGTCATGTTTTATGGCAGAAATCTGGTAAAAGAAAAAGCACGAGGATTTTGGAAACGTTTATGTTGTTTGTTGCCATGTATTCTTTATGAGTTCGCTCGC GCCTAGATATGTCTTGGTAGACATGTATTGTAGTGTTAGGATTATTATTTTGCTTTGAGCTTCATAGGTCATTGCATTTCAGTTGCAGCATAATGAAGTC CTTAAGTATTAGTTTTTTTGTCGAAGTTAAGTGATGGGCAAGGCCTTATAATGATTTCTTTTACCTTCACCATTTACAATATGGAAGTCTAACATGCCTG CTCTGTTGTTGCAGATTCGTTGAGATTCACATCTGCCCTTTCAGTTGCTCTAGCAGTTGTTTTCCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGAT
• Tissue: pods
• Gene name: LI_gene_188536;
• Additional information: details;

Expression of Ll_transcript_399022

FPKM

• PAB: 3.1
• PNAB: 0.6
• PS1: 0.6
• PS2: 0.3
• PS3: 0.4
• PW1: 0.8
• PW2: 1.1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399022

• Blastp: Amino acid transporter AVT6A from Arabidopsis with 60.56% of identity
• Blastx: Amino acid transporter AVT6A from Arabidopsis with 60.56% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT3G30390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456363.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;