Ll_transcript_472554

• Id Trinity: TRINITY_DN52045_c5_g2_i13
• Name Transcript: Ll_transcript_472554
• Sequence: TCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCATGCAATTTTCTCTCTCTTCCCTCTCTAAGGTATGTATTCTATCTCTCTT TCTCTCCCTTATTCAATAATTCTTCCCAAATCTTCATTCTTACCCAACCTTTCAATTCACCATCTTTATGCTTTTACCTCTATTAATTATAGGATTATGC GTAAAGTTTGTCCTTTTTAGCAACTTTTGTCAAATCTTTTTAAATTAATTACGATTTCTTCCTTGGGGTGTTGTGTTATGTATGCAGGTTAGGTATGAAA GCGATTAGGGATTTCAAAATGACCCCCCATTAATGTTATAATCACTTGGAATCGTTGAATACAAAGTAGAGTTTTTGTTTCTTCATTTTCTTCTAAGAAA TAGTACCTTGTTACCTTTAATATTGAAGTTGTAAGATGGGTTATCTCAATTCAGTGTTGTCCTCTTCAACCCAAGTTCATGCTGTTGCTGATGCACCTGT CACCGGTGGTGGACTCAGTCACAATGGCAAATTCAGCTATGGGTATGCTAGCTCTCCTGGCAGGCGATCTTCAATGGAAGACTTTTATGAGACAAGAATT GATGGTGTTGATGGTGAAATCGTTGGCCTTTTTGGAGTTTTTGATGGTATATTTAGTTCTTTCTCTTATCTCTCCGGTATGTACATTGAATGGAAAAGAC AACAACAACAAGAACAACAACCAAGCATTAGTCCCAGAGGGGTCAGCTGCCGGCATACATTGAATGGAAAATATGCCAAAATATAAAAAAAATTCTTTTA TGATTTTCCCTTTCTTAAAATAATGTGAAGTTAATTGTTTGATGTAACTTGTTGCTTCCATATGTAGATTATTCTATACTTTATGGCTTTATGCACTCAT AGAATACATAACTAGCTTTTGTATTTTTGTCCTCCATGGTCAGTCTTTTCTTCTGCTTATATTTTCTCAAATATACATACATACATATATATGGAGGAAA ATTTTGGATTTCTTCATAGTTGTGGTCTCCTCACACCTTTGACCTCAAGTCAGTCTAATTGTGGATGGCTTGGTTATTCTGTTTGGTCATAGTATTGTTT TCTGCACACCATAAAGGAAATGTCTTTGATGGTTGCCCATCTAATCAATCTTTCTATGGGCATAATCTCCAGAAGCTTCATCCACCTGTTCTTGTATCCA AACTTCTCCTTAGTATCCTGTTTTGTAAAGTGTGATTAAGGCGTGGTTATTGGTAGTATTCTGTTTTGTGACTTAAGAACCTTCATTTCTTCTTCCATGT GAGCAATTATCAAGTGCAAAGTGTTTCATTATTTGGCATCAGAATCTATTTCTTTCCTAAAGGTTAAGCATGAAGGAATTTTTTCCTATTGGTTATACCA AAATATAAGTATACAACCTATGCTTGATAATGTTTTTATCCTCAGAAAAATAGAAAACAGTTGCAAGCTTCTTGTTTATAACTCTTTCAGGTCATGGAGG TGTCCGTGCTGCTGAGTATGTCAAGCAAAACCTGTTTAGCAATTTGATGAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATAT AATCATACCGACTCTGAGTTTCTGAAATCAGAACATAGTCATAACAGAGATGCTGGGTCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGCTTGCTTG TAGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAACCAGACCAAACTGATGAAAGACAAAG GATTGAAGATGCAGGGGGCTTTGTCATGTGGGCTGGAACTTGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACAACTGAAGCAG TATGTTGTTGCTGATCCAGAAATCCAGGAGGAAAAGATTGACAGCTCTCTTGAGTTTCTTATATTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATG AGGAAGCTGTTGCTATGGTTAAACCAATTGAGGATGCAGAGGAGGCAGCAAAGATACTAATGTTAGAAGCATCTAGAAGAGGCAGTGCTGACAATATCAC TTGCGTTGTCGTTCGTTTCTCGGCGAACGAAGCCGCTTCTTCCCATAGTAGCTCCGGCTAAGCAACCTTCAAAAGAAGGACTGTAGTGCATTGCTAATGG TTGTGGATCCAAAGATAGGAAGCAAACTCTGTATCTGTTTTACACTAATAAAGAATAGGAAACAAATTCAAACTTGTTATGGTCCTCTATAGCATAGCGC TATTCCTCATTGTTTCAGTTCCATAATTAATTGGACACTATATGTTGCTAGGAAAAAGAGCATGTGTGCAAGGAGTGTAGCCACATTTATATTTGGACAT GCTGCAAAATTGGTTCCCATGTAATTTCAATAATGTTACTTATTTCCCTTTCTATTATTATTACCCCA
• Tissue: pods
• Gene name: LI_gene_189630;
• Additional information: details;

Expression of Ll_transcript_472554

FPKM

• PAB: 0.6
• PNAB: 1
• PS1: 0.5
• PS2: 0.7
• PS3: 0.7
• PW1: 1
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472554

• Blastp: Probable protein phosphatase 2C 59 from Arabidopsis with 86.21% of identity
• Blastx: Probable protein phosphatase 2C 59 from Arabidopsis with 88.43% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (AT4G31750)
• CantataDB: Link to cantataDB annotations (CNT0001502)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415301.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;