| Id Trinity | TRINITY_DN52576_c2_g1_i32 |
|---|---|
| Name Transcript | Ll_transcript_507619 |
| Sequence | ACAGGTTTCACTTGGTGGTAACAGCAGGACTGTTATGATAGCCTGCATAAGTCCAGCTGATATTAATGCGGAGGAAACCCTCAACACTCTGAAGTATGCA AATCGTGCACGCAATATCCAAAATAAGCCTGTGATCAATAGAGACCCGATGTCCAATGAGATGCTAAAAATGCGACAGCAGCTAGAATGTTTGCAGGCAG AACTTTGTGCTCGTGCTGGTGGTTCTTCTGTGGAAGTTCAGGTCCTTAAGGAAAGAATTGCTTGGCTTGAAGCTGCTAATGAAAATCTTTGCCGTGAACT TCATGAGTACCGCAGTAGATGCTCTGTTGTCGATCAATGTGAAAAAGATGCTCATGATGGCAGCATATGCATTGCAAAGATTGATGGACTTAAGAGGAGC TTACCCATCGTAGGGCCTGATTATCCAATGAATGAAACTGCAGGTGATTCAAAGGAAATTGAAGAAGTGGCAAAAGAGTGGGAGCACACACTTCTGCAAA ATAGCATGGACAAAGAATTGCATGAGTTGAATAAGCGCTTGGAACAGAAAGAGTTTGAGATGAAGCTTTTTGGAGCATCTGACGCTGAAGTACTCAAGCA GCACTTTGGAAGGAAGATCATGGAATTGGAGGATGAAAAGAGAGTTGTGCAGCGAGAGAGAGATTGTCTTTTGGCTGAAGTTGAAAACCTTGCTGCCAAT TCTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCATAAATTGAAAGCACTTGAAGCACAGATTATCGATTTGAAGAGGAAACAAGAGGGCCAGG TCCAGCTTATGAAGCAAAAGCAAAAAAGTGACGAAGCAGCAAAAAGACTGCAGGATGAAATACAATCTATAAAGGCTCAAAAGGTTCAATTGCAACAAAG GATAAAACAAGAGGCAGAACAATTTCGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTTTTGCAATTAAGAAAGGAGGGAAGAAGAAATGAGTATGAAAGG CATAAGCTACAAGCTTTAAATCAGCGTCAGAAAATGGTCCTTCAGAGAAAAACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAGGAGTTGCTAGAAG CTCGTAAAACCTCCAGCCGAGACACTTTAGTTACAATGAATGGGTGTGGAACAAATGGGCAGAACAATGAGAAGTCCTTACTACGGTGGCTTGATCATGA GCTGGAAGTCATGATAAAGGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAGAGCCAAATGCGAGCTGCCCTCGGAGAGGAGTTAGCCTTGTTGAAGCAA GTGAATGAGTTAGCTTCCAAGGGCCTAAGTCCTCCAAGAGGAAAGAATGGATTTGCTAGGTTTGCTTTTGTTTTTGTATAAATATGATTTAATTTTTTAT GCTTCTTTATATTTTGAAACACATGGGATATAAAAGTACGAATCTATCCCTTCCTTCCTGGTTGCTTTTGACACTTATTATACTTCCAGAGCTTCGTCCA TGTCACCAAATGCAAGAATGGCCAGAATAGCTTCACTTGAGAACTTGCTGAGCATATCATCTAATTCACTTGTGGCAATGGCTGCTCAACTTTCTGAGGC AGAAGAACGAGAACGGGCCATCGCTAGTCGTGTACGCTGGAACCAGTTGCGCTCAATGGCAGAAGCCAAGAATTTGCTTCAGTATATGTTCAATTCTGTT GCAGATGACAGGTGCCAACTGTGGGAGAAGGACATGGAAAACAGGGAAATGAAAGATCAAATCAAAGAACTTGTTGGTCTATTACGGCAAAGTGAGATTA AGAGGAAGGAAATTGACAAGGAGCTAAAAGTGAGGGAGCAAGCTGTTGCAACCACATTGGCTACGGCAGCTTCTGTAAGATCTTGTCTGCTTAAGTTTCA AGCAAATATCAACTAGGAATTTGAAAATAAAGCAATAGTTATCGTGTTGTCTGCCAAAAGGACAGATGTAGCCGCTTGTTGAAGGAACAAAATTAGGTTT GTGTTCAAAAGAAACAAGCCTTGGCAGGGCACTTAGGATTGCTGAGTGTCATGTATAAAAAACTTATCACACATCTTGACGGCTAGGATTTCTATGACCA CAAACTCTTCATACTTGCAGACCAAGTAGACCAAACATGAGGCCTAAGTTGAATAATCACCCCCAAATGTCAACAAGCTTGTAGCACAATGGGCACCTGC TCGAGTCTTTAGAGTTGTGTGTGATGTTGAGTCGGAGTTTTGACACACTTTTTTCCAAGACACTCTTTTTATTACTCTCCAACTAATAGAATTATCCCTA TAATAAAAATTGATTTGTACTAGATGTAGGGCTCAACAAGGAGAAGTTCAATGCCTCTCAGAGTTGACTTACTCTATCAGAAAAGGGTGTTCCTATCATA GGGAATGCAATGTTTAGTACCCAAACTTAAAGCAAGTCCTAGAAAACAACTCCAATAAGATGAAGGAATCTCTCTTGGCTCCAACCTGGCCCCAAACACT CACTCTCCTATAAATAGCTACACGGGAATGGGAGTAGGGACTGTTTCATGCTGACTGCACTAACCTTGCACTCTCACTTGATAATTGGAGTCTTAGAAGT TATCTCACCCCCGCTCTTCGACTCACTAAAGCTCCAAAGAGGTTTTTCGCCATGAGCTCATTCTTGTTCCATCAGCCCAACAACTCAAGATAGAACAAAA ATAAATCTAAATAATGAGATCTTCGACCTTTAAACTTGCCTTCTTGAATCTACTCACCTGTATCAGAGACATTTTATAGCTCGAATATAAAACAAATTTG AATCAGTTTTGCCTATCTAGCATAACTTTAATGTTTAAGTAGCACTTGACAATTAGGTTACCATTACATAAATGATAAAGAAATTATGTTTGAGGTTTTT GAGTTAGCTTTATAACTAAAATCTCCTCTAATTGGATTTTGTGTAGTCTTGGTCTTCCTTGTAGCTGATATTTTATGTCAGCTGCTTTTGTAAATATAAT AACTGCCATCAATGTATTGCTTTTGTTGCTAATAGTTAATTGTCATCACTTGATGTTAACAGGGAAACCCTCCAAATTTATTGAAACATTATGCTGAAGA TATCAATGGACCCTTATCTCCAGAGTCAGACTCAATACTGAAACAGTGCAAATATACGCCAGGCATTGTTAATGGCCATGTGAGGGAATCGGCAGCATTT ATAGATCAGAGTAGAAGGGTAATGTATTCTACGCTAATATTGATACTTTTCATTTCTATCTCCTCTAATTGGATGCAAGATTTTCTGTAAATGCAGATGG TACCCATGGGACAACTGTCAATGAAAAAGCTAGCAATGGTAGGACAAGCTTCTGGGAAGTTATGGAGGTGGAAAAGAAGCCATCATCAGTGGCTACTTCA GTTCAAATGGAAGTGGCAAAAGCCATGGAGACTTTCGGAATGGATTCGACACAGTGATGAGACAATCATGAGAGCGAAGCCACGTTCACAGTCTTTGCCG CATATCTCGTGATCCATTTTGTTGTCAGCCATTTTCTGTAGTTTCGGTATTCATTTTTTAACCCAAAACAACAATGATCCTAGATACGTGGCATTGGAAA GAACAGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_193837; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507619
| Blastp | Kinesin-like protein KIN-4A from Gossypium with 78.34% of identity |
|---|---|
| Blastx | Kinesin-like protein KIN-4A from Gossypium with 78.41% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107917911) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437938.1) |
| Pfam | Kinesin motor domain (PF00225.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |