Id Trinity | TRINITY_DN52681_c1_g2_i2 |
---|---|
Name Transcript | Ll_transcript_465025 |
Sequence | AGGTGCTGATAATGTAGTGGACCCTCGAAGACAAATTGATGAGCGGGCTCTGGAGAAAGAAGAGGAGCACTATTTTAATGAAGACAGTGACGAGGAAGGT ATAGCCTATGCTTCTTCTCAGCCTAATGAGAAAGGACTGCAACAACCTATATCCAATGGAGTTGCTGCAAGCTATTCGAATTCAAGTTCTTGGTCTTGTA GAATGGTTGACTATGATGATGATGAAGATTACAGGCCACCACCAAAGAAGCTGCCTGAATCTTCTGAGGAAGGGACAATGGAGTCTCCGAGGCAGAAAAG GAAATTACCTTCAAAGGATAAGGGGCCCGAACTTGTGAAGAAGCAGAAGTTATCCACGAATTCAAGATTTAAAGATAGTGTTTTTTCTGCTTTGTGTTCA TCATCGAGCCAAGCTATGCTACCTGACAAGAAAACCGCTACAAACATTCATACAGGTGTTCAAACAGTTGAAGGGAAAATGAGCTCAAATGAAGATAATC AAGATGAAAGGTCAAATGTTTCTAGAAGTTGCTCTCATAACAATAGCAGCAAAGTAGCTGAAGATAACCATGTAGAGAAAGAAACTGCAGCCTCTAGAAG CTGTTCTGATTGCCTGCGTGGCACATCAGATAACATACCGATGGGTGGAGAAGATCATCCATTGGTTCCTTCAAATTCCTCGCCAGAGATGGCAGTAAAT GGATCATAAGCTTTTAGAATCATTTGCTTGACTGTAAAATAGTAAGACAGGGGAATATTAAGTAGTGGGGGAAATTCTGATTATGTGTTCCGTCTAGGAC ATGTTGAGATACTGTACAGTGCCATTAAGTGGCTCGGAAGATAATTAATACAGCCAGTGGGTGGATCGGCTCCTATTCTCCATGCTTTCTATTTCGGGCA TTTAGCTTAGTAATTGTTGCTTTTGTATAACATTCTCAGACTTTTTCTTAACTCAATTTTTGCTAGAAGAATCATGGTGTGGGTTGTGGTGATCATGTTA TCACCAACCCATTTTCAGTTATTTGAACTTGGTGATAGAGGGCGCCAATGTTTGCCCTTCACAAGTTTTCCCTTTTGGTTTTCTTTTGTTTTTTGGGCGG TGGGTCTGTTAGCAGGGATATATATATGTTCAGTAATTTCTTGGTCCAAAATTTCAACAATATGCTTGGGAACCATCATCCGTTGTAAATATGTTATGCA ACGGACTTTTCATGCAGCTCTTTCACATTGCAACTGGATTCACATTTGTTTTCCACAGATCATGATTTATCGTGTATTTTGATTTCAACTGAATTGAAGT TTTAATTGCCCGACCTTTATACGAAAGCCTTATTTCTCTTTTCATCCTATGACTGTGGTTGAAGTAGGCCTGTTTACTGCCGTGTTAACCTTGGGTTTGT TTGGTTTGGCACAGTTGTTATAAAGTTTATACACATTTTTGGAGTCTAACGGGTATATATAGAAGTCTTTTCTTTCACTTCTTTTTCCTTTTAAAATCTA ACTCTCAAATAAACTATAAGCAATTTGTTATTTGTATTATGCTATCCAATTTTGAAGGATATAAGGTCTAGGGACATAACGAATAGGAAAATGTCTCAAA AAAGTAGTTTGTGAATATTACACTGGGCTTGATTTGGAGAGGTGTCGCTGAAACAGTTAATACGAGTGAGGTGGTGCGCATCATCGGATTTTGAGACACG TGTGCAGTGTGTTGCAAATGTGTCGCCACCAACTGCGCATTCTTGTAATTTAGGAAGATCCACATGTGACTCATTCAAACACGTGTTATCCTATCCACTA TTCTTCCCCATGTCATGTTTTCTTGTCTCTGTCTGTTATCATTTACTAACTCATCACTTTCCTTTCCCTCTTGTCTCTGTTTGTTTGTTTTAGTGTATAG TTAGTGGAAATCAATTAAGGAATTAAGATGAACAGCGGAAGCAGCAACTTGGAGACACGGTCTGTGTTGGATGAGCTAAGTAGCTTTAACAAAGGAGGAC TCTTCGATCTTGGACACCCTCTTCTCAATCGTATTCTTGACAGTTTCGTCAAAGCTGCAGGGGTACCCATAATCAATAACATTACATTTTCTCTCACATA AGGTTCAATGGTAACAAATAATGTTAGAAAATAATAATAAAGTGTTATCGCTCTCATGTCTCGCTTCACTTGTTCCAGATAGGTGCTGTTCAAGCTGTGT CCCGTGAGGCCTATTTCTTCACTGCTGTTGAAGGTTCAGGAGGGCTAGATAATGCAGGTGGTATGCCGCTAGAAGTTGGTGGCAAGAAACATCGTTTGCC TGGTCTCAGAGGAGAGACCAGCAGCAAATCCATTGAAGCTATGGTGAAAAATACCGGCAAAGAGTCCTTTCAATGGGGTAATGATATACCATCTCAACCT GAAGGATGCCATATTTTTCTATAATGCATGAATCCGCTAATGATTAGTAATTGTGTTGTTGTGTAATACATCATATTTGCCAAACTTGCAAGACTAACTA CATTTTATAAGTACCCATGACTCTATTCGTATTAACAAACTTGCAAGACAAAGAAGTTCACAGATTTTTGTAAAATGTAGGATTGGGTGCAGGAATATAT TCAGGTCTCACCTATGGGCTGAAGGAAGCTCGTGGAGTTCATGACTGGAAAAACAGTGCAGTTGCTGGAGCACTTACTGGGGCAGCACTTGCAGTTACAT CAGACAACTCATCTCATGAACAGATTGTGCAATGTGCTATCACTGGAGCAGCAATCTCCACTGCTGCAAATCTTCTCACTGGAATATTCTAAACGGTTTA ATTTCCCGGTTAAGATTGATTAATATTCCTGTGTTATATATGCAGAAGTGCAAAGATCCTCAAATCTAATATGTTCTTAAGTGTCTTCCATTTGGGTGAA TAGTTAGTTGGTTATTAGAGGAATCTCAAGCTTTCCTTTCTAAAAACTAACTTGTAAACAAATAAGTGTTTCCCTTCTAAAAGCTAGACTTTGGTGCAAA CTTTTTGAAGTTGCCATTAACTTATGATTTAGGGTACAAAATAAAAAGTCAAGTTGAATAACATGAGGGGTTCACTTTTAAGGGGGAAAACTTATTTTGA TATTTGAAAATAGTTTTACTTGATCAAAATTTCTGATATTTGAAAATTATGAATCTTTTTTTCTAGCAAGTATCTTCTCAATGTGCAAAAAAAAAATACT CCATATTAGCATGCCTGGAATACATTATCATTTCTATTTTCACAATTATCCTAAAATACATAATTTTGTGCTGTTTTCACAATTATGCTTGTGAAGGGGT ACAAATATGAGTTTAAGAAGATTGAAAGTGGGAAACTTATTCACCAAAAAACAAATTATGGGTTACCT BLAST |
Tissue | pods |
Gene name | LI_gene_194674; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465025
Blastp | - |
---|---|
Blastx | Outer envelope pore protein 16-2, chloroplastic from Arabidopsis with 66.18% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462469.1) |
Pfam | - |
Rfam | - |
GO | - |