miRNA 102 details

Id Micro102
SequenceCGCTGTCCATCCTGAGTTTCA 
Annotated namesbra-miR390-3p; 
Annotated pre-miRNAlus-MIR390a

Targets of miRNA 102

LuluDB transcript

ID Trinity

Target start position

Target end position

Target sequence

BLAST target sequence

Annotation method

Target details
Ll_transcript_35817; FTRINITY_DN58750_c1_g4_i1 222 242 CGAAGCTCGGGATGCACAGCG BLAST psRNATarget
Ll_transcript_35827; FTRINITY_DN58750_c1_g4_i4 240 260 CGAAGCTCGGGATGCACAGCG BLAST psRNATarget
Ll_transcript_78347; FTRINITY_DN85751_c0_g1_i1 172 192 GCAGACTTAGGATGGATAGCT BLAST psRNATarget
Ll_transcript_45453; FTRINITY_DN46265_c0_g1_i1 3 23 TAAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_45168; FTRINITY_DN54182_c6_g1_i1 88 108 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_43886; FTRINITY_DN54151_c4_g1_i1 118 138 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_131738; FTRINITY_DN57563_c0_g1_i13 2719 2739 TAAAACTGAGGATGGACAGTC BLAST psRNATarget
Ll_transcript_131740; FTRINITY_DN57563_c0_g1_i15 2731 2751 TAAAACTGAGGATGGACAGTC BLAST psRNATarget
Ll_transcript_131735; FTRINITY_DN57563_c0_g1_i11 2826 2846 TAAAACTGAGGATGGACAGTC BLAST psRNATarget
Ll_transcript_131737; FTRINITY_DN57563_c0_g1_i12 2828 2848 TAAAACTGAGGATGGACAGTC BLAST psRNATarget
Ll_transcript_75646; FTRINITY_DN55537_c3_g3_i5 335 355 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_75637; FTRINITY_DN55537_c3_g3_i4 620 640 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_75634; FTRINITY_DN55537_c3_g3_i2 980 1000 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_75656; FTRINITY_DN55537_c3_g3_i7 980 1000 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_75629; FTRINITY_DN55537_c3_g3_i1 1141 1161 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_75636; FTRINITY_DN55537_c3_g3_i3 1141 1161 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_37598; FTRINITY_DN58986_c2_g2_i1 890 910 ACAAGTTTAGGATGGGCGGTG BLAST psRNATarget
Ll_transcript_264783; FTRINITY_DN53625_c2_g1_i2 726 746 CAGAATTGAGGGTGGACGGCG BLAST psRNATarget
Ll_transcript_43062; FTRINITY_DN54138_c1_g2_i2 609 629 GGAAACTTGGGATGGGCACTG BLAST psRNATarget
Ll_transcript_43063; FTRINITY_DN54138_c1_g2_i3 1239 1259 GGAAACTTGGGATGGGCACTG BLAST psRNATarget
Ll_transcript_43073; FTRINITY_DN54138_c1_g2_i6 609 629 GGAAACTTGGGATGGGCACTG BLAST psRNATarget
Ll_transcript_43064; FTRINITY_DN54138_c1_g2_i4 1239 1259 GGAAACTTGGGATGGGCACTG BLAST psRNATarget
Ll_transcript_260916; FTRINITY_DN50896_c0_g1_i9 376 396 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260918; FTRINITY_DN50896_c0_g1_i11 406 426 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260915; FTRINITY_DN50896_c0_g1_i8 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_14763; FTRINITY_DN59268_c0_g1_i1 147 167 GAAGGCTCAGGATGGATTGTG BLAST psRNATarget
Ll_transcript_260919; FTRINITY_DN50896_c0_g1_i12 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260908; FTRINITY_DN50896_c0_g1_i1 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260914; FTRINITY_DN50896_c0_g1_i7 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260911; FTRINITY_DN50896_c0_g1_i4 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260910; FTRINITY_DN50896_c0_g1_i3 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260913; FTRINITY_DN50896_c0_g1_i6 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260917; FTRINITY_DN50896_c0_g1_i10 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_260909; FTRINITY_DN50896_c0_g1_i2 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_334964; TRINITY_DN74460_c0_g1_i1 142 162 GCAGACTTAGGATGGATAGCT BLAST psRNATarget
Ll_transcript_366924; TRINITY_DN46364_c1_g1_i2 114 134 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_282897; TRINITY_DN46151_c3_g5_i1 106 126 TTAAGCTCAGGAGGGATAGCG BLAST psRNATarget
Ll_transcript_288666; TRINITY_DN51305_c3_g2_i2 1035 1055 TAAAACTGAGGATGGACAGTC BLAST psRNATarget
Ll_transcript_467453; TRINITY_DN49263_c3_g1_i4 688 708 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_467446; TRINITY_DN49263_c3_g1_i1 887 907 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_467467; TRINITY_DN49263_c3_g1_i8 933 953 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_467463; TRINITY_DN49263_c3_g1_i7 887 907 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_467450; TRINITY_DN49263_c3_g1_i2 933 953 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_467455; TRINITY_DN49263_c3_g1_i5 1094 1114 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_467451; TRINITY_DN49263_c3_g1_i3 1293 1313 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_467462; TRINITY_DN49263_c3_g1_i6 1293 1313 GGAATATCAGGATGGACAGCT BLAST psRNATarget
Ll_transcript_389072; TRINITY_DN50939_c0_g1_i6 1303 1323 ACAAGTTTAGGATGGGCGGTG BLAST psRNATarget
Ll_transcript_389067; TRINITY_DN50939_c0_g1_i1 1376 1396 ACAAGTTTAGGATGGGCGGTG BLAST psRNATarget
Ll_transcript_389071; TRINITY_DN50939_c0_g1_i5 1303 1323 ACAAGTTTAGGATGGGCGGTG BLAST psRNATarget
Ll_transcript_389083; TRINITY_DN50939_c0_g1_i14 1376 1396 ACAAGTTTAGGATGGGCGGTG BLAST psRNATarget
Ll_transcript_389069; TRINITY_DN50939_c0_g1_i3 1429 1449 ACAAGTTTAGGATGGGCGGTG BLAST psRNATarget
Ll_transcript_422019; TRINITY_DN47943_c5_g1_i2 726 746 CAGAATTGAGGGTGGACGGCG BLAST psRNATarget
Ll_transcript_391724; TRINITY_DN46490_c3_g4_i2 625 645 GGAAACTTGGGATGGGCACTG BLAST psRNATarget
Ll_transcript_391722; TRINITY_DN46490_c3_g4_i1 1255 1275 GGAAACTTGGGATGGGCACTG BLAST psRNATarget
Ll_transcript_333505; TRINITY_DN71437_c0_g1_i1 139 159 CCAAATTTAGGGTGGGCATCG BLAST psRNATarget
Ll_transcript_437398; TRINITY_DN48913_c1_g1_i11 1442 1462 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_462527; TRINITY_DN75526_c0_g1_i1 112 132 GAAGGCTCAGGATGGATTGTG BLAST psRNATarget
Ll_transcript_437392; TRINITY_DN48913_c1_g1_i5 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437394; TRINITY_DN48913_c1_g1_i7 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437391; TRINITY_DN48913_c1_g1_i4 1782 1802 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437397; TRINITY_DN48913_c1_g1_i10 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437390; TRINITY_DN48913_c1_g1_i3 1442 1462 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437395; TRINITY_DN48913_c1_g1_i8 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437400; TRINITY_DN48913_c1_g1_i13 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437388; TRINITY_DN48913_c1_g1_i1 1782 1802 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437389; TRINITY_DN48913_c1_g1_i2 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437396; TRINITY_DN48913_c1_g1_i9 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_437393; TRINITY_DN48913_c1_g1_i6 1174 1194 TTGAGTTCGGGATGGACACCG BLAST psRNATarget
Ll_transcript_413187; TRINITY_DN45613_c0_g3_i1 152 172 AAACACTCAAGATGGACAGCT BLAST psRNATarget

Expression of miRNA 102


Labels

FPAB_1 abscising flower pedicels (replicate 1)      PAB_1 abscising pods (replicate 1)      PW2_1   pods wall stages 4-6 (replicate 1)
FPAB_2 abscising flower pedicels (replicate 2)      PAB_2 abscising pods (replicate 2)      PW2_2   pods wall stages 4-6 (replicate 2)
FPNAB_1   non-abscising flower pedicels (replicate 1)        PNAB_1   non-abscising pods (replicate 1)        PW3_1   pods wall stages 7-8 (replicate 1)
FPNAB_2   non-abscising flower pedicels (replicate 2)        PNAB_2   non-abscising pods (replicate 2)        PW3_2   pods wall stages 7-8 (replicate 2)
LF1_1 lower flowers stage 1 (replicate 1)      PS1_1 seeds stages 1-3 (replicate 1)      UF1_1 upper flowers stage 1 (replicate 1)
LF1_2 lower flowers stage 1 (replicate 2)      PS1_2 seeds stages 1-3 (replicate 2)      UF1_2 upper flowers stage 1 (replicate 2)
LF2_1 lower flowers stage 2 (replicate 1)      PS2_1 seeds stages 4-6 (replicate 1)      UF2_1 upper flowers stage 2 (replicate 1)
LF2_2 lower flowers stage 2 (replicate 2)      PS2_2 seeds stages 4-6 (replicate 2)      UF2_2 upper flowers stage 2 (replicate 2)
LF3_1 lower flowers stage 3 (replicate 1)      PS3_1 seeds stages 7-8 (replicate 1)      UF3_1 upper flowers stage 3 (replicate 1)
LF3_2 lower flowers stage 3 (replicate 2)      PS3_2   seeds stages 7-8 (replicate 2)        UF3_2 upper flowers stage 3 (replicate 2)
LF4_1 lower flowers stage 4 (replicate 1)      PW1_1   pods wall stages 1-3 (replicate 1)        UF4_1 upper flowers stage 4 (replicate 1)
LF4_2 lower flowers stage 4 (replicate 2)      PW1_2   pods wall stages 1-3 (replicate 2)        UF4_2 upper flowers stage 4 (replicate 2)